FFCP PHASE1:Hg19::chr17:47841886..47841889,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:47841886..47841889,- to FFCP PHASE1:Hg19::chr17:47841886..47841889,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81558 | |EntrezGene=81558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24179 | |HGNC=24179 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C073 | |UniProt=Q9C073 | ||
|association_with_transcript=-357bp_to_ENST00000240364_5end | |||
|cluster_id=chr17:47841886..47841889,- | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_9_at_FAM117A_5end | |||
|id=chr17:47841886..47841889,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;1.92e-15;1!CL:0002253;1.39e-08;2!CL:0002535;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.29e-08,2;CL:0002535,2.67e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.23e-08;2!UBERON:0010056;2.23e-08;2 | |||
|ontology_enrichment_disease=DOID:162!3.42e-33!235;DOID:14566!4.10e-32!239;DOID:0050687!5.66e-24!143;DOID:305!8.69e-20!106;DOID:0050686!1.44e-16!137;DOID:2531!2.55e-14!51;DOID:0060083!2.55e-14!51;DOID:1240!4.38e-13!39;DOID:1749!6.49e-12!14;DOID:1036!1.27e-10!8;DOID:3095!1.09e-09!22;DOID:2994!1.09e-09!22;DOID:3119!3.82e-09!14;DOID:299!8.25e-09!25;DOID:8692!1.96e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.14e-16;8!DOID:1799;1.92e-15;1!DOID:10165;1.92e-15;1!DOID:1798;1.92e-15;1!DOID:1240;1.83e-11;39!DOID:1749;9.23e-10;14!DOID:2531;3.80e-08;51!DOID:0060083;3.80e-08;51!DOID:8692;2.64e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.20e-16,8;DOID:1799,2.38e-15,1;DOID:10165,2.38e-15,1;DOID:1798,2.38e-15,1;DOID:1240,7.13e-13,39;DOID:2531,8.83e-10,51;DOID:0060083,8.83e-10,51;DOID:1749,8.96e-10,14;DOID:8692,1.02e-07,31;DOID:0050686,1.97e-07,137;DOID:162,2.15e-07,235;DOID:14566,3.28e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.23e-08;2!UBERON:0004801;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.67e-08,2;UBERON:0004801,2.67e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,1.00988449083511,0.0711418433484141,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,1.71752672377882,0,0.223676107892416,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699679999969566,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.448788222048861,0,0,0,0,1.02193298195737,0,0.664846727600626,0.451191321234361,0,0.167821586975843,9.67744036893344,1.43042921082341,0.210998064528027,0,2.82706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.694238953340524,0,1.04471047896483,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0.72045208577053,0.114536596165916,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.738832686744051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,1.25812753484717,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.589848616738702,0,1.84841065840541,0,0,0,0,0,0,1.04762677792569,0.49131575253029,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0.945550727071746,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0.365753774946808,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0.203977659483963,0.26721740526556,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,1.00988449083511,0.0711418433484141,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,1.71752672377882,0,0.223676107892416,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699679999969566,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.448788222048861,0,0,0,0,1.02193298195737,0,0.664846727600626,0.451191321234361,0,0.167821586975843,9.67744036893344,1.43042921082341,0.210998064528027,0,2.82706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.694238953340524,0,1.04471047896483,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0.72045208577053,0.114536596165916,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.738832686744051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,1.25812753484717,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.589848616738702,0,1.84841065840541,0,0,0,0,0,0,1.04762677792569,0.49131575253029,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0.945550727071746,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0.365753774946808,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0.203977659483963,0.26721740526556,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p9@FAM117A | |||
}} | }} |
Latest revision as of 21:42, 15 September 2015
Short description: | p9@FAM117A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FAM117A_5end |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | -357bp_to_ENST00000240364_5end |
EntrezGene: | FAM117A |
HGNC: | 24179 |
UniProt: | Q9C073 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.29e-08 | 2 |
epithelial cell of cervix | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.67e-08 | 2 |
cervix epithelium | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.20e-16 | 8 |
islet cell tumor | 2.38e-15 | 1 |
endocrine pancreas cancer | 2.38e-15 | 1 |
pancreatic endocrine carcinoma | 2.38e-15 | 1 |
leukemia | 7.13e-13 | 39 |
hematologic cancer | 8.83e-10 | 51 |
immune system cancer | 8.83e-10 | 51 |
squamous cell carcinoma | 8.96e-10 | 14 |
myeloid leukemia | 1.02e-07 | 31 |
organ system cancer | 1.97e-07 | 137 |
cancer | 2.15e-07 | 235 |
disease of cellular proliferation | 3.28e-07 | 239 |