FFCP PHASE1:Hg19::chr17:79803474..79803506,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:79803474..79803506,- to FFCP PHASE1:Hg19::chr17:79803474..79803506,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5034 | |EntrezGene=5034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8548 | |HGNC=8548 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-142bp_to_ENST00000473021_5end | |||
|cluster_id=chr17:79803474..79803506,- | |||
|coexpression_cluster_id=C846 | |||
|description=CAGE_peak_2_at_P4HB_5end | |||
|id=chr17:79803474..79803506,- | |||
|ontology_enrichment_celltype=CL:0000548!1.20e-22!679;CL:0000004!1.20e-22!679;CL:0000255!1.20e-22!679;CL:0000012!5.41e-22!682;CL:0000144!2.41e-19!625;CL:0000055!3.61e-18!180;CL:0002371!6.00e-18!591;CL:0000220!5.35e-13!246;CL:0002321!1.06e-12!248;CL:0000222!4.98e-12!119;CL:0000003!1.33e-11!722;CL:0000063!2.30e-11!578;CL:0000057!1.26e-10!75;CL:0000680!4.04e-10!57;CL:0000056!4.04e-10!57;CL:0000355!4.04e-10!57;CL:0000183!8.32e-10!59;CL:0000187!2.49e-09!54;CL:0000192!3.15e-09!42;CL:0000514!3.15e-09!42;CL:0000723!9.78e-09!436;CL:0000393!2.12e-08!60;CL:0000211!2.12e-08!60;CL:0000048!2.32e-08!430;CL:0000034!2.86e-08!444;CL:0000066!6.77e-08!254;CL:0000359!6.14e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.06e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.04e-12,250;CL:0000222,4.00e-12,121;CL:0000057,1.75e-11,76;CL:0000680,4.56e-10,58;CL:0000056,4.56e-10,58;CL:0000355,4.56e-10,58;CL:0000187,2.89e-09,55;CL:0000723,4.73e-09,433;CL:0000192,5.87e-09,43;CL:0000514,5.87e-09,43;CL:0000048,1.15e-08,427;CL:0000034,1.25e-08,441;CL:0000393,2.96e-08,61;CL:0000211,2.96e-08,61;CL:0000066,1.95e-07,253;CL:0000359,5.49e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.20e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.22e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.22e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.15e-14!143;UBERON:0003914!6.22e-13!118;UBERON:0002100!1.54e-11!216;UBERON:0000490!4.16e-11!138;UBERON:0000486!3.06e-10!82;UBERON:0004290!1.29e-09!70;UBERON:0003104!1.81e-09!238;UBERON:0009142!1.81e-09!238;UBERON:0004872!2.14e-09!84;UBERON:0000914!2.27e-09!83;UBERON:0002329!2.27e-09!83;UBERON:0003077!2.27e-09!83;UBERON:0003059!2.27e-09!83;UBERON:0007282!2.27e-09!83;UBERON:0009618!2.27e-09!83;UBERON:0007285!2.27e-09!83;UBERON:0000926!2.52e-09!448;UBERON:0004120!2.52e-09!448;UBERON:0006603!2.52e-09!448;UBERON:0001637!5.12e-09!42;UBERON:0003509!5.12e-09!42;UBERON:0004572!5.12e-09!42;UBERON:0001134!8.78e-09!61;UBERON:0002036!8.78e-09!61;UBERON:0003082!8.78e-09!61;UBERON:0002385!1.01e-08!63;UBERON:0001015!1.01e-08!63;UBERON:0000383!1.01e-08!63;UBERON:0002049!8.71e-08!79;UBERON:0007798!8.71e-08!79;UBERON:0000055!1.52e-07!69;UBERON:0003102!2.22e-07!95;UBERON:0004573!3.50e-07!33;UBERON:0004571!3.50e-07!33;UBERON:0001981!6.13e-07!60;UBERON:0007500!6.13e-07!60;UBERON:0004537!6.13e-07!60;UBERON:0006965!6.13e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.31e-07;42!UBERON:0003509;8.31e-07;42!UBERON:0004572;8.31e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.87e-14,122;UBERON:0003914,2.44e-13,117;UBERON:0003104,3.74e-12,160;UBERON:0009142,3.74e-12,160;UBERON:0002100,4.46e-12,199;UBERON:0000490,9.90e-12,148;UBERON:0007503,1.76e-10,78;UBERON:0000486,7.00e-10,83;UBERON:0002329,2.26e-09,71;UBERON:0003059,2.26e-09,71;UBERON:0007282,2.26e-09,71;UBERON:0004290,2.26e-09,71;UBERON:0009618,2.26e-09,71;UBERON:0007524,2.62e-09,73;UBERON:0004872,5.24e-09,83;UBERON:0001637,5.64e-09,42;UBERON:0003509,5.64e-09,42;UBERON:0004572,5.64e-09,42;UBERON:0003077,6.91e-09,72;UBERON:0007285,6.91e-09,72;UBERON:0001134,1.64e-08,62;UBERON:0002036,1.64e-08,62;UBERON:0003082,1.64e-08,62;UBERON:0002385,1.85e-08,64;UBERON:0001015,1.85e-08,64;UBERON:0000383,1.85e-08,64;UBERON:0003102,2.22e-07,99;UBERON:0002049,2.81e-07,78;UBERON:0007798,2.81e-07,78;UBERON:0004573,4.25e-07,33;UBERON:0004571,4.25e-07,33;UBERON:0000055,5.27e-07,68 | |||
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| ||
|short_description=p2@P4HB | |||
}} | }} |
Latest revision as of 08:31, 18 September 2015
Short description: | p2@P4HB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_P4HB_5end |
Coexpression cluster: | C846_pancreas_leiomyoma_Smooth_tenocyte_Fibroblast_Adipocyte_Hepatocyte |
Association with transcript: | -142bp_to_ENST00000473021_5end |
EntrezGene: | P4HB |
HGNC: | 8548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.04e-12 | 250 |
mesodermal cell | 4.00e-12 | 121 |
fibroblast | 1.75e-11 | 76 |
muscle precursor cell | 4.56e-10 | 58 |
myoblast | 4.56e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.56e-10 | 58 |
muscle cell | 2.89e-09 | 55 |
somatic stem cell | 4.73e-09 | 433 |
smooth muscle cell | 5.87e-09 | 43 |
smooth muscle myoblast | 5.87e-09 | 43 |
multi fate stem cell | 1.15e-08 | 427 |
stem cell | 1.25e-08 | 441 |
electrically responsive cell | 2.96e-08 | 61 |
electrically active cell | 2.96e-08 | 61 |
epithelial cell | 1.95e-07 | 253 |
vascular associated smooth muscle cell | 5.49e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 6.87e-14 | 122 |
epithelial tube | 2.44e-13 | 117 |
mesenchyme | 3.74e-12 | 160 |
entire embryonic mesenchyme | 3.74e-12 | 160 |
trunk | 4.46e-12 | 199 |
unilaminar epithelium | 9.90e-12 | 148 |
epithelial vesicle | 1.76e-10 | 78 |
multilaminar epithelium | 7.00e-10 | 83 |
somite | 2.26e-09 | 71 |
presomitic mesoderm | 2.26e-09 | 71 |
presumptive segmental plate | 2.26e-09 | 71 |
dermomyotome | 2.26e-09 | 71 |
trunk paraxial mesoderm | 2.26e-09 | 71 |
dense mesenchyme tissue | 2.62e-09 | 73 |
splanchnic layer of lateral plate mesoderm | 5.24e-09 | 83 |
artery | 5.64e-09 | 42 |
arterial blood vessel | 5.64e-09 | 42 |
arterial system | 5.64e-09 | 42 |
paraxial mesoderm | 6.91e-09 | 72 |
presumptive paraxial mesoderm | 6.91e-09 | 72 |
skeletal muscle tissue | 1.64e-08 | 62 |
striated muscle tissue | 1.64e-08 | 62 |
myotome | 1.64e-08 | 62 |
muscle tissue | 1.85e-08 | 64 |
musculature | 1.85e-08 | 64 |
musculature of body | 1.85e-08 | 64 |
surface structure | 2.22e-07 | 99 |
vasculature | 2.81e-07 | 78 |
vascular system | 2.81e-07 | 78 |
systemic artery | 4.25e-07 | 33 |
systemic arterial system | 4.25e-07 | 33 |
vessel | 5.27e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.22e-07 | 14 |