FFCP PHASE1:Hg19::chr19:17516440..17516448,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:17516440..17516448,+ to FFCP PHASE1:Hg19::chr19:17516440..17516448,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93343 | |EntrezGene=93343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25153 | |HGNC=25153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000534306,uc010eat.1_5end | |||
|cluster_id=chr19:17516440..17516448,+ | |||
|description=CAGE_peak_11_at_FAM125A_5end | |||
|id=chr19:17516440..17516448,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.53e-28!172;CL:0000566!9.53e-28!172;CL:0000860!1.50e-27!45;CL:0000988!6.24e-26!182;CL:0002057!1.86e-24!42;CL:0000738!3.04e-24!140;CL:0002032!2.93e-23!165;CL:0000837!2.93e-23!165;CL:0002087!6.76e-23!119;CL:0002031!3.30e-21!124;CL:0000557!1.63e-20!71;CL:0002194!4.73e-20!63;CL:0000576!4.73e-20!63;CL:0000040!4.73e-20!63;CL:0000559!4.73e-20!63;CL:0000766!1.13e-19!76;CL:0000763!1.23e-19!112;CL:0000049!1.23e-19!112;CL:0000839!1.81e-19!70;CL:0002009!4.26e-19!65;CL:0002393!4.24e-11!9;CL:0002397!4.24e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.99e-36;6!CL:0002397;2.99e-36;6!CL:0002032;1.97e-14;1!CL:0000557;1.97e-14;1!CL:0000766;4.42e-09;69!CL:0000576;5.08e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.59e-24,9;CL:0002397,2.59e-24,9;CL:0000763,3.51e-16,108;CL:0000049,3.51e-16,108;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0000860,5.51e-15,42;CL:0002057,5.51e-15,42;CL:0000557,8.00e-15,67;CL:0002032,1.56e-14,161;CL:0000837,1.56e-14,161;CL:0000766,8.86e-14,72;CL:0000473,4.77e-13,48;CL:0000234,4.77e-13,48;CL:0000738,1.52e-12,136;CL:0000839,6.48e-12,66;CL:0002194,2.49e-10,59;CL:0000576,2.49e-10,59;CL:0000040,2.49e-10,59;CL:0000559,2.49e-10,59;CL:0002087,2.63e-10,115;CL:0002009,5.60e-10,61;CL:0002031,8.34e-10,120;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-10;42 | |||
|ontology_enrichment_disease=DOID:0060058!1.26e-08!10;DOID:162!1.05e-07!235;DOID:2531!3.00e-07!51;DOID:0060083!3.00e-07!51;DOID:14566!3.04e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.97e-14;1!DOID:0060061;1.97e-14;1!DOID:8691;1.97e-14;1!DOID:2355;1.97e-14;1!DOID:74;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.61e-14,1;DOID:0060060,2.11e-14,1;DOID:0060061,2.11e-14,1;DOID:8691,2.11e-14,1;DOID:74,6.58e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.65e-18!102;UBERON:0003061!2.65e-18!102;UBERON:0002371!5.21e-18!80;UBERON:0002193!2.92e-17!112;UBERON:0001474!6.36e-16!86;UBERON:0002405!2.19e-15!115;UBERON:0004765!7.30e-12!101;UBERON:0001434!7.30e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.56e-13,76;UBERON:0002390,2.90e-12,98;UBERON:0003061,2.90e-12,98;UBERON:0001474,5.66e-12,82;UBERON:0002193,4.93e-11,108;UBERON:0004765,7.77e-11,90;UBERON:0002405,1.85e-10,93;UBERON:0001434,1.15e-09,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0.383829398097213,2.63187409637329,0,0,0,0,0.426507697462265,0.293600439334847,6.64794490238253,3.00816671205213,3.03815219002193,0,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.870627715885752,1.13477044938228,0.622822248995575,0,0.521482918420201,0.868755378820466,0,0.736555271975129,0,0.211255286311942,0.637812899895131,3.14487968262564,0.561643155732475,1.05123824989054,1.44653028027372,0.285012743741249,0,0.91332076882317,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,1.15295962733569,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.37285620900479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.865615277858669,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0,0,0.628303510868405,0.108647371922008,0.31900115973192,0,0,0,0,0.332423363800313,0.225595660617181,0,0.167821586975843,7.21064184351903,0.158936578980379,0,0,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0.195984794828755,0.34823682632161,0,0,0.0967563312890851,0.438535902517113,0.492692742319255,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0.343609788497747,0,0,0,0,0,0,0.101998217636322,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.315132729228895,0.576911008668165,0,0,1.43944664511834,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,0.790446527591777,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,1.19992437512958,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0.399764623699716,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0.383829398097213,2.63187409637329,0,0,0,0,0.426507697462265,0.293600439334847,6.64794490238253,3.00816671205213,3.03815219002193,0,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.870627715885752,1.13477044938228,0.622822248995575,0,0.521482918420201,0.868755378820466,0,0.736555271975129,0,0.211255286311942,0.637812899895131,3.14487968262564,0.561643155732475,1.05123824989054,1.44653028027372,0.285012743741249,0,0.91332076882317,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,1.15295962733569,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.37285620900479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.865615277858669,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0,0,0.628303510868405,0.108647371922008,0.31900115973192,0,0,0,0,0.332423363800313,0.225595660617181,0,0.167821586975843,7.21064184351903,0.158936578980379,0,0,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0.195984794828755,0.34823682632161,0,0,0.0967563312890851,0.438535902517113,0.492692742319255,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0.343609788497747,0,0,0,0,0,0,0.101998217636322,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.315132729228895,0.576911008668165,0,0,1.43944664511834,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,0.790446527591777,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,1.19992437512958,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0.399764623699716,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p11@FAM125A | |||
}} | }} |
Latest revision as of 11:56, 16 September 2015
Short description: | p11@FAM125A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FAM125A_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000534306, uc010eat.1_5end |
EntrezGene: | FAM125A |
HGNC: | 25153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.59e-24 | 9 |
CD14-positive, CD16-positive monocyte | 2.59e-24 | 9 |
myeloid cell | 3.51e-16 | 108 |
common myeloid progenitor | 3.51e-16 | 108 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
classical monocyte | 5.51e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.51e-15 | 42 |
granulocyte monocyte progenitor cell | 8.00e-15 | 67 |
hematopoietic oligopotent progenitor cell | 1.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-14 | 161 |
myeloid leukocyte | 8.86e-14 | 72 |
defensive cell | 4.77e-13 | 48 |
phagocyte | 4.77e-13 | 48 |
leukocyte | 1.52e-12 | 136 |
myeloid lineage restricted progenitor cell | 6.48e-12 | 66 |
monopoietic cell | 2.49e-10 | 59 |
monocyte | 2.49e-10 | 59 |
monoblast | 2.49e-10 | 59 |
promonocyte | 2.49e-10 | 59 |
nongranular leukocyte | 2.63e-10 | 115 |
macrophage dendritic cell progenitor | 5.60e-10 | 61 |
hematopoietic lineage restricted progenitor cell | 8.34e-10 | 120 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.56e-13 | 76 |
hematopoietic system | 2.90e-12 | 98 |
blood island | 2.90e-12 | 98 |
bone element | 5.66e-12 | 82 |
hemolymphoid system | 4.93e-11 | 108 |
skeletal element | 7.77e-11 | 90 |
immune system | 1.85e-10 | 93 |
skeletal system | 1.15e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.61e-14 | 1 |
non-Hodgkin lymphoma | 2.11e-14 | 1 |
cutaneous T cell lymphoma | 2.11e-14 | 1 |
mycosis fungoides | 2.11e-14 | 1 |
hematopoietic system disease | 6.58e-08 | 2 |