FFCP PHASE1:Hg19::chr19:49999681..49999705,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49999681..49999705,+ to FFCP PHASE1:Hg19::chr19:49999681..49999705,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6205 | |EntrezGene=6205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10384 | |HGNC=10384 | ||
|TSSclassifier=strong | |||
|UniProt=P62280 | |UniProt=P62280 | ||
|association_with_transcript=47bp_to_ENST00000270625,NM_001015,uc002pob.1_5end | |||
|cluster_id=chr19:49999681..49999705,+ | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPS11_5end | |||
|id=chr19:49999681..49999705,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.42e-17!42;CL:0002087!3.59e-16!119;CL:0002031!1.70e-15!124;CL:0000860!8.70e-15!45;CL:0000037!1.75e-14!172;CL:0000566!1.75e-14!172;CL:0002032!7.10e-14!165;CL:0000837!7.10e-14!165;CL:0000988!1.19e-13!182;CL:0000738!3.47e-13!140;CL:0000542!1.04e-09!53;CL:0000051!1.04e-09!53;CL:0000838!1.10e-09!52;CL:0002009!1.76e-08!65;CL:0000236!5.87e-08!14;CL:0000034!8.76e-08!444;CL:0002194!9.43e-08!63;CL:0000576!9.43e-08!63;CL:0000040!9.43e-08!63;CL:0000559!9.43e-08!63;CL:0000791!1.26e-07!18;CL:0000789!1.26e-07!18;CL:0002420!1.26e-07!18;CL:0002419!1.26e-07!18;CL:0000790!1.26e-07!18;CL:0002320!2.68e-07!365;CL:0000048!5.16e-07!430;CL:0000723!9.73e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-13;33!CL:0002057;1.58e-13;33!CL:0000473;3.69e-09;39!CL:0000234;3.69e-09;39!CL:0000576;3.00e-08;48!CL:0000236;4.20e-08;13!CL:0000791;1.25e-07;18!CL:0000789;1.25e-07;18!CL:0002419;1.25e-07;18!CL:0002087;3.23e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.85e-17,115;CL:0000860,4.42e-17,42;CL:0002057,4.42e-17,42;CL:0002031,1.04e-16,120;CL:0000037,2.07e-15,168;CL:0002032,8.44e-15,161;CL:0000837,8.44e-15,161;CL:0000473,1.83e-14,48;CL:0000234,1.83e-14,48;CL:0000988,2.64e-14,177;CL:0000738,3.52e-14,136;CL:0000542,1.04e-09,53;CL:0000051,1.04e-09,53;CL:0002009,1.05e-09,61;CL:0000838,1.10e-09,52;CL:0002194,6.43e-09,59;CL:0000576,6.43e-09,59;CL:0000040,6.43e-09,59;CL:0000559,6.43e-09,59;CL:0000034,5.10e-08,441;CL:0000236,5.87e-08,14;CL:0000791,1.26e-07,18;CL:0000789,1.26e-07,18;CL:0002420,1.26e-07,18;CL:0002419,1.26e-07,18;CL:0000790,1.26e-07,18;CL:0002320,1.46e-07,361;CL:0000557,1.99e-07,67;CL:0000048,3.09e-07,427;CL:0000839,3.14e-07,66;CL:0000723,5.91e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-12;42!CL:0000790;1.25e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.68e-07!375;UBERON:0002371!9.33e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,5.41e-08,90;UBERON:0002371,1.22e-07,76;UBERON:0002204,2.15e-07,167;UBERON:0001434,3.09e-07,100;UBERON:0002384,3.16e-07,371;UBERON:0001474,7.08e-07,82 | |||
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| ||
|short_description=p1@RPS11 | |||
}} | }} |
Latest revision as of 07:49, 19 September 2015
Short description: | p1@RPS11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS11_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 47bp_to_ENST00000270625, NM_001015, uc002pob.1_5end |
EntrezGene: | RPS11 |
HGNC: | 10384 |
UniProt: | P62280 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal element | 5.41e-08 | 90 |
bone marrow | 1.22e-07 | 76 |
musculoskeletal system | 2.15e-07 | 167 |
skeletal system | 3.09e-07 | 100 |
connective tissue | 3.16e-07 | 371 |
bone element | 7.08e-07 | 82 |