FFCP PHASE1:Hg19::chr19:8509851..8509876,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:8509851..8509876,+ to FFCP PHASE1:Hg19::chr19:8509851..8509876,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4670 | |EntrezGene=4670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5046 | |HGNC=5046 | ||
|TSSclassifier=strong | |||
|UniProt=P52272 | |UniProt=P52272 | ||
|association_with_transcript=48bp_to_NM_005968,NM_031203,uc010dwc.1,uc010dwd.2,uc010dwe.2,uc010xke.1_5end | |||
|cluster_id=chr19:8509851..8509876,+ | |||
|description=CAGE_peak_1_at_HNRNPM_5end | |||
|id=chr19:8509851..8509876,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.04e-15!172;CL:0000566!2.04e-15!172;CL:0002032!1.09e-14!165;CL:0000837!1.09e-14!165;CL:0000763!2.63e-14!112;CL:0000049!2.63e-14!112;CL:0000988!4.17e-14!182;CL:0000860!2.56e-09!45;CL:0002057!1.97e-08!42;CL:0000738!2.45e-07!140;CL:0002031!7.51e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.71e-10;33!CL:0002057;2.71e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.31e-15,168;CL:0002032,2.27e-14,161;CL:0000837,2.27e-14,161;CL:0000763,4.84e-14,108;CL:0000049,4.84e-14,108;CL:0000988,9.50e-14,177;CL:0000860,1.97e-08,42;CL:0002057,1.97e-08,42;CL:0000738,4.54e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.26e-15!51;DOID:0060083!5.26e-15!51;DOID:162!2.22e-14!235;DOID:1240!1.27e-13!39;DOID:14566!4.16e-13!239;DOID:8692!6.70e-12!31;DOID:0050687!1.10e-07!143;DOID:0050686!9.50e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.40e-11;31!DOID:1240;5.24e-11;39!DOID:2531;2.09e-09;51!DOID:0060083;2.09e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.26e-15,51;DOID:0060083,5.26e-15,51;DOID:162,2.22e-14,235;DOID:1240,1.27e-13,39;DOID:14566,4.16e-13,239;DOID:8692,6.70e-12,31;DOID:0050687,1.10e-07,143;DOID:0050686,9.50e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HNRNPM | |||
}} | }} |
Latest revision as of 00:34, 25 September 2015
Short description: | p1@HNRNPM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRNPM_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_NM_005968, NM_031203, uc010dwc.1, uc010dwd.2, uc010dwe.2, uc010xke.1_5end |
EntrezGene: | HNRNPM |
HGNC: | 5046 |
UniProt: | P52272 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.31e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.27e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-14 | 161 |
myeloid cell | 4.84e-14 | 108 |
common myeloid progenitor | 4.84e-14 | 108 |
hematopoietic cell | 9.50e-14 | 177 |
classical monocyte | 1.97e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-08 | 42 |
leukocyte | 4.54e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.26e-15 | 51 |
immune system cancer | 5.26e-15 | 51 |
cancer | 2.22e-14 | 235 |
leukemia | 1.27e-13 | 39 |
disease of cellular proliferation | 4.16e-13 | 239 |
myeloid leukemia | 6.70e-12 | 31 |
cell type cancer | 1.10e-07 | 143 |
organ system cancer | 9.50e-07 | 137 |