FFCP PHASE1:Hg19::chr1:156721502..156721513,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156721502..156721513,- to FFCP PHASE1:Hg19::chr1:156721502..156721513,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt=P51858 | |UniProt=P51858 | ||
|association_with_transcript=22bp_to_ENST00000357325_5end | |||
|cluster_id=chr1:156721502..156721513,- | |||
|description=CAGE_peak_3_at_HDGF_5end | |||
|id=chr1:156721502..156721513,- | |||
|ontology_enrichment_celltype=CL:0000066!3.89e-12!254;CL:0000548!1.24e-09!679;CL:0000004!1.24e-09!679;CL:0000255!1.24e-09!679;CL:0000012!2.60e-09!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.82e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.66e-19!235;DOID:14566!7.42e-18!239;DOID:0050687!1.12e-11!143;DOID:305!5.93e-09!106;DOID:0050686!1.29e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.66e-19,235;DOID:14566,7.50e-18,239;DOID:0050687,1.12e-11,143;DOID:305,5.93e-09,106;DOID:0050686,1.29e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0008947!2.46e-08!38;UBERON:0003258!2.46e-08!38;UBERON:0000072!3.14e-08!46;UBERON:0000065!2.40e-07!53;UBERON:0001737!7.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;6.67e-08;37!UBERON:0001737;6.55e-07;9!UBERON:0001557;6.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,2.46e-08,38;UBERON:0003258,2.46e-08,38;UBERON:0000072,3.97e-08,47;UBERON:0000065,2.83e-07,54;UBERON:0005177,4.51e-07,101;UBERON:0001737,7.26e-07,9 | |||
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| ||
|short_description=p3@HDGF | |||
}} | }} |
Latest revision as of 17:56, 17 September 2015
Short description: | p3@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HDGF_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000357325_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | P51858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.82e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 2.46e-08 | 38 |
endoderm of foregut | 2.46e-08 | 38 |
segment of respiratory tract | 3.97e-08 | 47 |
respiratory tract | 2.83e-07 | 54 |
trunk region element | 4.51e-07 | 101 |
larynx | 7.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.66e-19 | 235 |
disease of cellular proliferation | 7.50e-18 | 239 |
cell type cancer | 1.12e-11 | 143 |
carcinoma | 5.93e-09 | 106 |
organ system cancer | 1.29e-08 | 137 |