FFCP PHASE1:Hg19::chr1:165414280..165414289,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6258 | |EntrezGene=6258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10479 | |HGNC=10479 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=119bp_to_ENST00000465764_5end | |||
|cluster_id=chr1:165414280..165414289,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_10_at_RXRG_5end | |||
|id=chr1:165414280..165414289,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.74e-09;3 | |||
|ontology_enrichment_disease=DOID:1909!2.70e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.07e-13;2!DOID:5409;1.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.40e-14,2;DOID:5409,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-22!115;UBERON:0001894!2.03e-20!7;UBERON:0006222!2.03e-20!7;UBERON:0001049!5.80e-19!57;UBERON:0005068!5.80e-19!57;UBERON:0006241!5.80e-19!57;UBERON:0007135!5.80e-19!57;UBERON:0000955!1.63e-18!69;UBERON:0006238!1.63e-18!69;UBERON:0005743!2.79e-17!86;UBERON:0002780!5.65e-17!41;UBERON:0001890!5.65e-17!41;UBERON:0006240!5.65e-17!41;UBERON:0003296!1.06e-16!4;UBERON:0010133!1.06e-16!4;UBERON:0001017!1.51e-16!82;UBERON:0003080!1.69e-16!42;UBERON:0002346!1.85e-16!90;UBERON:0002616!4.12e-16!59;UBERON:0003075!8.66e-16!86;UBERON:0007284!8.66e-16!86;UBERON:0003056!1.03e-15!61;UBERON:0000073!3.70e-15!94;UBERON:0001016!3.70e-15!94;UBERON:0000153!2.17e-13!129;UBERON:0007811!2.17e-13!129;UBERON:0000033!9.57e-12!123;UBERON:0000924!2.46e-11!173;UBERON:0006601!2.46e-11!173;UBERON:0004121!9.76e-11!169;UBERON:0001905!1.30e-09!2;UBERON:0002757!1.30e-09!2;UBERON:0010134!1.30e-09!2;UBERON:0002784!1.30e-09!2;UBERON:0005408!1.30e-09!2;UBERON:0001899!1.30e-09!2;UBERON:0001630!3.04e-09!2;UBERON:0005090!3.04e-09!2;UBERON:0000341!7.57e-09!2;UBERON:0000007!8.19e-09!2;UBERON:0000475!6.56e-08!365;UBERON:0001893!5.63e-07!34;UBERON:0002308!7.41e-07!9;UBERON:0000125!7.41e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0001134;4.08e-07;16!UBERON:0002036;4.08e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7 | |||
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| ||
|short_description=p10@RXRG | |||
}} | }} |
Latest revision as of 09:49, 18 September 2015
Short description: | p10@RXRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RXRG_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 119bp_to_ENST00000465764_5end |
EntrezGene: | RXRG |
HGNC: | 10479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.40e-14 | 2 |
lung small cell carcinoma | 1.49e-07 | 4 |