FFCP PHASE1:Hg19::chr1:27692193..27692207,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:27692193..27692207,+ to FFCP PHASE1:Hg19::chr1:27692193..27692207,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:27692193..27692207,+ | |||
|description=CAGE_peak_at_chr1:27692193..27692207,+ | |||
|id=chr1:27692193..27692207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.99e-16;2!CL:0001016;3.99e-16;2!CL:1001319;1.17e-08;1!CL:1000600;1.17e-08;1!CL:0000453;5.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.02e-16,2;CL:0001016,5.02e-16,2;CL:1001319,6.16e-09,1;CL:1000600,6.16e-09,1;CL:0000453,6.27e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.92e-20!106;DOID:0050687!2.94e-18!143;DOID:162!5.48e-16!235;DOID:14566!1.13e-15!239;DOID:1749!5.90e-09!14;DOID:299!2.56e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;4.69e-09;1!DOID:3347;4.69e-09;1!DOID:3603;4.69e-09;1!DOID:1749;6.38e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,4.52e-09,1;DOID:3603,4.52e-09,1;DOID:1749,5.25e-09,14;DOID:3347,5.70e-09,1;DOID:162,8.57e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.69e-09;1!UBERON:0005056;4.69e-09;1!UBERON:0004176;4.69e-09;1!UBERON:0004645;1.17e-08;1!UBERON:0001256;1.17e-08;1!UBERON:0001259;1.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.89e-09,1;UBERON:0005056,4.89e-09,1;UBERON:0004645,6.16e-09,1;UBERON:0001256,6.16e-09,1;UBERON:0001259,6.16e-09,1 | |||
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| ||
|short_description=p@chr1:27692193..27692207,+ | |||
}} | }} |
Latest revision as of 06:45, 28 July 2015
Short description: | p@chr1:27692193..27692207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27692193..27692207, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.02e-16 | 2 |
immature CD1a-positive Langerhans cell | 5.02e-16 | 2 |
bladder cell | 6.16e-09 | 1 |
lower urinary tract cell | 6.16e-09 | 1 |
Langerhans cell | 6.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 4.89e-09 | 1 |
external female genitalia | 4.89e-09 | 1 |
urinary bladder urothelium | 6.16e-09 | 1 |
wall of urinary bladder | 6.16e-09 | 1 |
mucosa of urinary bladder | 6.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.52e-09 | 1 |
mucinous cystadenocarcinoma | 4.52e-09 | 1 |
squamous cell carcinoma | 5.25e-09 | 14 |
osteosarcoma | 5.70e-09 | 1 |
cancer | 8.57e-07 | 235 |