FFCP PHASE1:Hg19::chr1:9299927..9299954,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:9299927..9299954,+ to FFCP PHASE1:Hg19::chr1:9299927..9299954,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9563 | |EntrezGene=9563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4795 | |HGNC=4795 | ||
|TSSclassifier=strong | |||
|UniProt=O95479 | |UniProt=O95479 | ||
|association_with_transcript=24bp_to_CR749282_5end | |||
|cluster_id=chr1:9299927..9299954,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_H6PD_5end | |||
|id=chr1:9299927..9299954,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000990;8.33e-20;8!CL:0000451;4.30e-16;10!CL:0002554;1.11e-10;2!CL:0002195;1.49e-10;2!CL:0002571;1.49e-10;2!CL:0002588;2.99e-10;2!CL:0000453;1.91e-09;5!CL:0000840;2.14e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,7.71e-20,8;CL:0000451,4.04e-16,10;CL:0002554,6.67e-11,2;CL:0002195,1.14e-10,2;CL:0002571,1.14e-10,2;CL:0002588,1.86e-10,2;CL:0000453,1.78e-09,5;CL:0000840,2.14e-08,5;CL:0001029,2.14e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.15e-11!26;UBERON:0002107!2.86e-08!19;UBERON:0006925!2.86e-08!19;UBERON:0008836!2.86e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.37e-15;19!UBERON:0006925;1.37e-15;19!UBERON:0002365;6.22e-14;31!UBERON:0002330;6.22e-14;31!UBERON:0002423;1.54e-11;25!UBERON:0002368;2.48e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.19e-15,19;UBERON:0006925,1.19e-15,19;UBERON:0008836,1.19e-15,19;UBERON:0002365,2.75e-14,31;UBERON:0002330,2.75e-14,31;UBERON:0008835,2.45e-13,22;UBERON:0003894,2.45e-13,22;UBERON:0009854,1.06e-12,23;UBERON:0007499,1.40e-11,25;UBERON:0009497,1.40e-11,25;UBERON:0000015,1.40e-11,25;UBERON:0002423,1.40e-11,25;UBERON:0006235,1.40e-11,25;UBERON:0004161,1.40e-11,25;UBERON:0009856,4.37e-11,26;UBERON:0002368,6.62e-08,35 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10707267820062,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886917589850256,0.087834785693126,0,0,0,16.8764644700435,20.0249197894157,12.3650903282545,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.468642863667593,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,1.82032272387605,3.59309070908119,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,1.2347220339942,0,11.4079531339648,18.6737171168749,10.6342183202653,0.882926198829301,0,0.857839051492628,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,1.17002132569619,0.891786973732369,0,0,0,0,0,0,0,2.81754988842323,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.387815147273333,0,0,0.531876233169741,0,1.28603687131071,0,0.799266537048298,1.71573592389777,8.68194568626309,0,0.65147236858747,2.13235169245527,0.791951872933429,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.144781306667579,1.43833425785268,0.537182889719687,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.616838775210622,0.532685175939381,0,0.519254429183621,0.232420756919918,0,0,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.9273691048295,0,0.082509499920588,0,0,0,0,0,0.614014698904518,0.689182862422653,0.644521469209642,0.725083469571143,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.975267478179181,0,0,0.818999468447914,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,1.29070216983646,1.47373561519682,0,0.354761064070598,0.844430541190656,0,0.379473173765715,1.04980416073495,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0.842391534340376,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0.921722292925374,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0,0,1.15362711958732,0,0,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0,0,3.06579894587209,1.2558420511602,0.997270091400938,0,0,0,0,2.2251121057253,0,0,0,0,0,0.176915129006678,0,0,0,0.313265848516366,0.067401132980677,0,0,0,0,0,1.18375320854817,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.315132729228895,0.164831716762333,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0,14.5086711341302,3.97520666736664,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.298509605773748,0.701139929541673,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.797525143673985,0,0,1.14241563650639,0.406870733204662,2.18218391043071,0.644463342254931,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,2.65729680626726,2.45348091383766,0,0,0,1.19992437512958,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.397832444232549,1.72983755203292,0,0,0,0,0,0,0,0,0,0,5.48257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0.514464028312255,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0.285906176706625,0.158013611732727,0.116241425368125,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.469919589899268,0.709036767709349,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0.203977659483963,0,0,0.50141507858475,0.151557396436479,0,0,0,0.852935927603924,0,0.387533459016037,0.248298857183432,0,0.0636471582781649,0,0.217716747896961,0,0.40411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| |phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10707267820062,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886917589850256,0.087834785693126,0,0,0,16.8764644700435,20.0249197894157,12.3650903282545,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.468642863667593,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,1.82032272387605,3.59309070908119,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,1.2347220339942,0,11.4079531339648,18.6737171168749,10.6342183202653,0.882926198829301,0,0.857839051492628,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,1.17002132569619,0.891786973732369,0,0,0,0,0,0,0,2.81754988842323,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.387815147273333,0,0,0.531876233169741,0,1.28603687131071,0,0.799266537048298,1.71573592389777,8.68194568626309,0,0.65147236858747,2.13235169245527,0.791951872933429,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.144781306667579,1.43833425785268,0.537182889719687,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.616838775210622,0.532685175939381,0,0.519254429183621,0.232420756919918,0,0,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.9273691048295,0,0.082509499920588,0,0,0,0,0,0.614014698904518,0.689182862422653,0.644521469209642,0.725083469571143,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.975267478179181,0,0,0.818999468447914,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,1.29070216983646,1.47373561519682,0,0.354761064070598,0.844430541190656,0,0.379473173765715,1.04980416073495,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0.842391534340376,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0.921722292925374,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0,0,1.15362711958732,0,0,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0,0,3.06579894587209,1.2558420511602,0.997270091400938,0,0,0,0,2.2251121057253,0,0,0,0,0,0.176915129006678,0,0,0,0.313265848516366,0.067401132980677,0,0,0,0,0,1.18375320854817,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.315132729228895,0.164831716762333,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0,14.5086711341302,3.97520666736664,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.298509605773748,0.701139929541673,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.797525143673985,0,0,1.14241563650639,0.406870733204662,2.18218391043071,0.644463342254931,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,2.65729680626726,2.45348091383766,0,0,0,1.19992437512958,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.397832444232549,1.72983755203292,0,0,0,0,0,0,0,0,0,0,5.48257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0.514464028312255,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0.285906176706625,0.158013611732727,0.116241425368125,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.469919589899268,0.709036767709349,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0.203977659483963,0,0,0.50141507858475,0.151557396436479,0,0,0,0.852935927603924,0,0.387533459016037,0.248298857183432,0,0.0636471582781649,0,0.217716747896961,0,0.40411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| ||
|short_description=p6@H6PD | |||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p6@H6PD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_H6PD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 24bp_to_CR749282_5end |
EntrezGene: | H6PD |
HGNC: | 4795 |
UniProt: | O95479 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 7.71e-20 | 8 |
dendritic cell | 4.04e-16 | 10 |
fibroblast of lymphatic vessel | 6.67e-11 | 2 |
hepatic stem cell | 1.14e-10 | 2 |
hepatic mesenchymal stem cell | 1.14e-10 | 2 |
smooth muscle cell of the umbilical vein | 1.86e-10 | 2 |
Langerhans cell | 1.78e-09 | 5 |
immature conventional dendritic cell | 2.14e-08 | 5 |
common dendritic progenitor | 2.14e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.19e-15 | 19 |
digestive gland | 1.19e-15 | 19 |
liver bud | 1.19e-15 | 19 |
exocrine gland | 2.75e-14 | 31 |
exocrine system | 2.75e-14 | 31 |
hepatic diverticulum | 2.45e-13 | 22 |
liver primordium | 2.45e-13 | 22 |
digestive tract diverticulum | 1.06e-12 | 23 |
epithelial sac | 1.40e-11 | 25 |
epithelium of foregut-midgut junction | 1.40e-11 | 25 |
anatomical boundary | 1.40e-11 | 25 |
hepatobiliary system | 1.40e-11 | 25 |
foregut-midgut junction | 1.40e-11 | 25 |
septum transversum | 1.40e-11 | 25 |
sac | 4.37e-11 | 26 |
endocrine gland | 6.62e-08 | 35 |