FFCP PHASE1:Hg19::chr22:40390930..40390994,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:40390930..40390994,+ to FFCP PHASE1:Hg19::chr22:40390930..40390994,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=113828 | |EntrezGene=113828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25148 | |HGNC=25148 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEG4 | |UniProt=Q8NEG4 | ||
|association_with_transcript=0bp_to_ENST00000333407,NM_138435,uc003ayk.1_5end | |||
|cluster_id=chr22:40390930..40390994,+ | |||
|coexpression_cluster_id=C1455 | |||
|description=CAGE_peak_1_at_FAM83F_5end | |||
|id=chr22:40390930..40390994,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.71e-17!43;CL:0000066!1.60e-14!254;CL:0000223!1.44e-12!59;CL:0002159!4.52e-09!13;CL:0002368!5.10e-09!13;CL:0002251!9.97e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.87e-17;42!CL:0002368;2.26e-11;13!CL:0002251;7.17e-11;20!CL:0002159;2.37e-10;14!CL:0000622;5.02e-07;5!CL:0002202;6.18e-07;9!CL:0002632;6.18e-07;9!CL:0000039;9.66e-07;7!CL:0000586;9.66e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.77e-21,42;CL:0000066,3.84e-19,253;CL:0000223,1.57e-14,58;CL:0002368,2.40e-11,13;CL:0002251,7.65e-11,20;CL:0002159,2.37e-10,14;CL:0000622,5.15e-07,5;CL:0002202,6.48e-07,9;CL:0002632,6.48e-07,9;CL:0000039,7.87e-07,7;CL:0000586,7.87e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;9.40e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.22e-17!169;UBERON:0000925!9.22e-17!169;UBERON:0006595!9.22e-17!169;UBERON:0001007!3.39e-12!155;UBERON:0001555!3.39e-12!155;UBERON:0007026!3.39e-12!155;UBERON:0004921!4.19e-11!129;UBERON:0004185!4.19e-11!129;UBERON:0007023!1.16e-09!115;UBERON:0000464!1.71e-09!104;UBERON:0001004!3.29e-09!72;UBERON:0000077!5.24e-09!130;UBERON:0000466!6.39e-09!126;UBERON:0003135!3.89e-08!11;UBERON:0000161!5.49e-08!35;UBERON:0000166!1.52e-07!21;UBERON:0003101!3.20e-07!22;UBERON:0000079!3.20e-07!22;UBERON:0005911!8.49e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.48e-13;33!UBERON:0003135;4.56e-10;11!UBERON:0003101;1.52e-09;22!UBERON:0000079;1.52e-09;22!UBERON:0001041;6.61e-09;14!UBERON:0001555;1.42e-08;54!UBERON:0005409;9.62e-08;22!UBERON:0001044;2.98e-07;6!UBERON:0003293;2.98e-07;6!UBERON:0003294;2.98e-07;6!UBERON:0010047;2.98e-07;6!UBERON:0003408;2.98e-07;6!UBERON:0000167;2.98e-07;6!UBERON:0000161;3.17e-07;19!UBERON:0000166;3.17e-07;19!UBERON:0000473;3.91e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.85e-20,160;UBERON:0000925,9.85e-20,160;UBERON:0006595,9.85e-20,160;UBERON:0001007,1.37e-14,145;UBERON:0001555,1.37e-14,145;UBERON:0007026,1.37e-14,145;UBERON:0004921,1.09e-13,118;UBERON:0003135,4.52e-10,11;UBERON:0001004,8.09e-10,74;UBERON:0000161,1.37e-09,36;UBERON:0003101,1.61e-09,22;UBERON:0000079,1.61e-09,22;UBERON:0000166,3.46e-08,22;UBERON:0001008,1.86e-07,48;UBERON:0001041,2.67e-07,87;UBERON:0001044,3.02e-07,6;UBERON:0003293,3.02e-07,6;UBERON:0003294,3.02e-07,6;UBERON:0010047,3.02e-07,6;UBERON:0000167,3.02e-07,6;UBERON:0000473,4.07e-07,8;UBERON:0005911,5.15e-07,82;UBERON:0006554,5.59e-07,47;UBERON:0000160,9.91e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.79120467188971,2.83973783769224,2.37390280405608,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,2.36018566109342,0,0.309632246632152,19.3078457140575,21.9880320708123,31.0593368540102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.05353633910031,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,10.7402841908124,32.7865759463288,41.5278575918561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,24.8573609721245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4519547011259,12.5463215471784,16.3478619371732,6.58658013099815,6.09636934278832,8.8307396580834,6.3233243559376,7.82194637714448,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,4.42758378755209,0,23.0475599358114,29.2244558469811,19.5026206478564,10.7402596383894,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,8.43604505880993,5.71139235876122,7.08875486211932,17.2847948816497,16.2755005567819,46.3893041789906,0,2.20121085033065,5.39053100406007,3.60299883542404,5.42842463733434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0.213455115606889,9.09382714338778,0,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,8.33930202182193,18.4465952679022,31.123374260333,0,0,0,1.35359883872224,1.07821471946181,0.784349769176855,4.38417673959782,0.73886140225013,0,0,0,0,0,0,5.86215428003588,11.6350641250021,1.56712328305525,5.26223703950243,7.84306353074702,0,0,0,1.33953315142039,0.0915694648183434,0,12.6338418359158,20.8019278731687,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,14.5450725517661,14.6064451197481,23.6083518114981,25.390602994743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.780426486984,40.2181365321472,22.8671068208777,0.753150406214233,18.9422363975341,30.3248656201726,30.5966805940306,11.0267232099341,1.01489521846434,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,1.58625035258854,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4798702628603,1.02555725490326,0,0,0,1.67121139316383,3.56357616999166,1.53580351049616,0,0,0,0,0,1.59398390600856,2.76283915531148,14.612099375548,0,0,0,4.04407580162971,11.6363763539146,0,1.1837208676432,0,0,0,0,0,1.5625665665114,2.36141999989728,1.44999915086959,15.93108275997,0,0,2.06846023944879,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,12.2692894965171,2.6932590476329,0,2.99733075704478,1.70539524378567,6.7361370591645,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,3.8165329287164,0,13.9336670350991,6.98814759576379,4.888241159469,0,0,0,0,0,0,0,0.782658475728359,0,30.3829990194031,3.62972148145992,0.30607276163049,0,0,0,0,0,0,0,1.13843818411917,0,0.347119476670262,7.83939179315021,0,7.86270007089136,0,0,0,0,15.7122206711239,0,3.16373037092745,0,0,0,3.32437350649165,0.160317640503067,4.26905989478705,0,3.02589876023623,0,2.9171149636534,0.14405479798815,0,4.9495747269527,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,13.6640176195266,10.8656154911815,8.72424709861289,0.449947783103001,28.6306723186441,0.182248669974074,19.7906465683567,4.2555081941567,2.93745693555989,0,0,4.98979513030558,0,0.662091970365432,0,0,0,0,0,0,0,0,1.02586563574658,1.32506888912221,0,0,0,4.9337051562167,0.427149650270779,0.471612915298998,1.24271716604159,0,0,0,17.8735552175651,0.544017803369474,0.2506898940227,0.919036730290385,0,15.2342473362727,0,0,0,0,0,0,0,0,0,0,0,0,35.3607309810413,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33936370075881,0,0,0,0,0,44.062044931625,28.6155539615168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.138314504928436,0,0,10.5018058796097,0,0.733714394086716,8.20232229667401,0,0,0,0.451261970095544,0,12.5042241797295,3.14288033377707,0,1.77427303460454,0,0,0,0,0,3.83780436800028,5.95453414067153,0,3.19406069098988,0,0,1.21393120847326,2.73194629621557,0.354809480650555,0,0,0,0,0,2.11339663594931,6.51492670659266,0,24.1034060449859,2.73947616152849,0,0,0.357382720883282,0,0,0,0,4.35153944742377,20.31549877418,22.1203091780509,8.17431981758527,0,0,30.4838676137469,3.2074961596167,0,0,0,9.32427219344808,1.5849330247695,0,0,0,2.91426595835484,20.1187938577411,8.55488333193883,0,2.59775988689608,0.219881033490858,10.1145105189671,12.1163428229473,6.3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| ||
|short_description=p1@FAM83F | |||
}} | }} |
Latest revision as of 19:35, 24 September 2015
Short description: | p1@FAM83F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM83F_5end |
Coexpression cluster: | C1455_Tracheal_Corneal_Keratinocyte_Mammary_Urothelial_Bronchial_Esophageal |
Association with transcript: | 0bp_to_ENST00000333407, NM_138435, uc003ayk.1_5end |
EntrezGene: | FAM83F |
HGNC: | 25148 |
UniProt: | Q8NEG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.77e-21 | 42 |
epithelial cell | 3.84e-19 | 253 |
endodermal cell | 1.57e-14 | 58 |
respiratory epithelial cell | 2.40e-11 | 13 |
epithelial cell of alimentary canal | 7.65e-11 | 20 |
general ecto-epithelial cell | 2.37e-10 | 14 |
acinar cell | 5.15e-07 | 5 |
epithelial cell of tracheobronchial tree | 6.48e-07 | 9 |
epithelial cell of lower respiratory tract | 6.48e-07 | 9 |
germ line cell | 7.87e-07 | 7 |
germ cell | 7.87e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.85e-20 | 160 |
endoderm | 9.85e-20 | 160 |
presumptive endoderm | 9.85e-20 | 160 |
digestive system | 1.37e-14 | 145 |
digestive tract | 1.37e-14 | 145 |
primitive gut | 1.37e-14 | 145 |
subdivision of digestive tract | 1.09e-13 | 118 |
male reproductive organ | 4.52e-10 | 11 |
respiratory system | 8.09e-10 | 74 |
orifice | 1.37e-09 | 36 |
male organism | 1.61e-09 | 22 |
male reproductive system | 1.61e-09 | 22 |
oral opening | 3.46e-08 | 22 |
renal system | 1.86e-07 | 48 |
foregut | 2.67e-07 | 87 |
saliva-secreting gland | 3.02e-07 | 6 |
gland of oral region | 3.02e-07 | 6 |
gland of foregut | 3.02e-07 | 6 |
oral gland | 3.02e-07 | 6 |
oral cavity | 3.02e-07 | 6 |
testis | 4.07e-07 | 8 |
endo-epithelium | 5.15e-07 | 82 |
urinary system structure | 5.59e-07 | 47 |
intestine | 9.91e-07 | 17 |