FFCP PHASE1:Hg19::chr2:36764595..36764608,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:36764595..36764608,+ to FFCP PHASE1:Hg19::chr2:36764595..36764608,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:36764595..36764608,+ | |||
|coexpression_cluster_id=C2699 | |||
|description=CAGE_peak_at_chr2:36764595..36764608,+ | |||
|id=chr2:36764595..36764608,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-14!180;CL:0000057!6.63e-14!75;CL:0000222!1.07e-13!119;CL:0000220!1.09e-13!246;CL:0002321!3.59e-13!248;CL:0000213!3.34e-11!57;CL:0000215!3.34e-11!57;CL:0000066!2.26e-08!254;CL:0000077!3.49e-08!19;CL:0000548!1.04e-07!679;CL:0000004!1.04e-07!679;CL:0000255!1.04e-07!679;CL:0002620!1.32e-07!23;CL:0000012!3.01e-07!682;CL:0000144!6.18e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.07e-11;19!CL:0000213;8.13e-09;58!CL:0000215;8.13e-09;58!CL:0002139;1.01e-07;24!CL:0002620;1.09e-07;23!CL:0002559;9.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.60e-17,58;CL:0000215,2.60e-17,58;CL:0000222,1.40e-13,121;CL:0000057,3.02e-12,76;CL:0000077,2.62e-11,19;CL:0000076,3.08e-10,63;CL:0002321,1.61e-08,250;CL:0002139,7.15e-08,24;CL:0002620,7.84e-08,23;CL:0000115,3.14e-07,36;CL:0002078,3.17e-07,45;CL:0002559,7.80e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.65e-07;5!DOID:450;7.65e-07;5!DOID:66;7.65e-07;5!DOID:423;7.65e-07;5!DOID:0080000;7.65e-07;5!DOID:11722;7.65e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.17e-07,5;DOID:450,4.17e-07,5;DOID:66,4.17e-07,5;DOID:423,4.17e-07,5;DOID:0080000,4.17e-07,5;DOID:11722,4.17e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.52e-09!79;UBERON:0007798!2.52e-09!79;UBERON:0000468!2.95e-09!659;UBERON:0000055!5.51e-08!69;UBERON:0000483!6.29e-08!309;UBERON:0004923!6.42e-08!57;UBERON:0000119!7.12e-08!312;UBERON:0000467!8.50e-08!625;UBERON:0005256!1.19e-07!143;UBERON:0000480!1.20e-07!626;UBERON:0003102!4.53e-07!95;UBERON:0000475!5.25e-07!365;UBERON:0002097!5.40e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.02e-07;41!UBERON:0000947;3.46e-07;21!UBERON:0010191;3.46e-07;21!UBERON:0002073;9.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.69e-10,68;UBERON:0002049,4.98e-10,78;UBERON:0007798,4.98e-10,78;UBERON:0002097,3.20e-09,41;UBERON:0002199,1.60e-08,46;UBERON:0002416,1.60e-08,46;UBERON:0007500,2.10e-08,59;UBERON:0001981,2.10e-08,59;UBERON:0004537,2.10e-08,59;UBERON:0006965,2.10e-08,59;UBERON:0001637,4.88e-08,42;UBERON:0003509,4.88e-08,42;UBERON:0004572,4.88e-08,42;UBERON:0004872,2.29e-07,83;UBERON:0000947,2.33e-07,21;UBERON:0010191,2.33e-07,21;UBERON:0002073,7.80e-07,5;UBERON:0005086,7.80e-07,5 | |||
|phase1_expression=1.09007027562334,6.42301571672949,0.986680828671798,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0.527533956456907,0.247532705920093,0.662794751455832,2.01697543935533,1.80808358407193,1.46062018077475,1.46379839637152,0.123121058076788,0.816002764977012,0.313454721478088,1.14494394852423,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.895037932904712,1.44575660953827,0.50133791063589,6.51809335323707,0.795285947051099,0,0.472674085820339,1.77383517970051,1.49319135678314,0.261958150995425,0,1.11235332835329,0,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0.347140501607594,0,2.51699661725944,11.2798397195428,2.08994966536811,2.32575083252396,0.71153252537342,1.33888245105868,2.41697590265488,0,5.12530320851156,1.47065232138347,9.72170337458112,2.05389375053383,0.22452937262617,0.225222960966644,0,0,0.732806975721629,0,0,1.3082821564276,0.993943903390637,2.15271869829786,0.794455084879313,4.30254931123221,1.41867352879343,0.560677600142307,1.06748995729705,4.44001587150888,0,0.942974704487816,0.490385709340376,0,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0.587172493218824,0.485618833104395,0.421352420106746,0,0.982674538494144,0.103325781175765,0,1.97813543422845,0.910161361938026,0.718618141816238,0.168336113954066,0.250237039743928,0,0.877955241761676,3.0648779579902,0.600952235626387,2.1552114800404,6.27863724911017,1.92201649936711,2.33125091275518,8.10245959427886,1.44273540933814,3.60696756063881,1.11670113798954,1.5189869901714,1.46155507741798,3.5340728394176,0.736399189138395,1.13152239773168,4.9701342952326,2.41805035746337,1.69560592310488,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0,0,1.56449532329816,5.14592750554308,1.38134921352481,5.57241513638375,2.16563844500876,1.53798840051797,0.674338760312407,0.482022059766964,1.65440959098591,1.08939722046203,0.949082476444386,0.674156540800822,0.98110732562673,0.769494313892781,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.857839051492628,1.09750285408626,0,1.10581869652794,1.20364978706088,0.977424915930974,0,4.3299402607582,0.34779121492523,0.352226082707465,2.16549671641611,1.85194205030644,3.61482889245737,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.626909658919938,0.581267877027924,0.383382679165211,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0.5867062865676,0.387815147273333,0,1.690605505112,2.39344304926383,2.08014873822732,0,1.41849132023278,0.532844358032199,3.71742783511184,0,0,0.65147236858747,1.42156779497018,0.791951872933429,0.301439377059586,0,2.49932477955143,0,0,0,1.19812427745791,4.59447743336456,0,0.868687840005475,1.84928690295345,0.895304816199478,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,1.08506009479894,5.19927153827018,13.0253161821928,6.15039418632345,1.52283839490527,0.601892199455438,0,2.0694614258501,0.664225598535437,0.184369168541703,2.17209036170207,0,0,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,1.48864684691266,0.767309866440312,3.92924132206303,1.28139149255701,1.53512174720011,3.37793234401576,0,2.31314540703983,0.710246901252508,0.328508624055237,2.07701771673448,2.32420756919918,0.725156697549733,2.00506470303285,0.368323955743585,1.26295892981067,2.1850940160806,2.09799063935079,0,1.69433741629712,0,2.92278449306521,0.316654886678627,5.68666920354483,1.02056223165909,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,1.30151357865721,1.13345112812495,0.27470839445503,0.165018999841176,0.574265537996172,0.650060246036521,4.82051789532479,0.290012154876366,0.462145851343933,0.15350367472613,0.413509717453592,0.537101224341368,0.435050081742686,1.19317278382541,0.0890320356467374,0.991709492165869,0.576570202095319,0.255225424989168,0.2023155617111,0.464845549297286,4.7221852024596,1.3940745403212,0.924100740528266,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,1.5250415513906,0.511795582622668,0,0,0,1.2591072030832,1.09814811894422,0.589062011728432,0,0,0,0,2.19342140668156,0,0.409499734223957,1.55545975149084,0,0,5.30751180192976,1.31535265576129,0.578775534266688,0.655894752046633,0.811641507850816,1.54911749049875,0,1.29070216983646,1.8667317792493,0.35667105148125,0,3.58882980006029,2.96365403663912,0,0.349934720244983,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,0,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0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|phase1_expression=1.09007027562334,6.42301571672949,0.986680828671798,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0.527533956456907,0.247532705920093,0.662794751455832,2.01697543935533,1.80808358407193,1.46062018077475,1.46379839637152,0.123121058076788,0.816002764977012,0.313454721478088,1.14494394852423,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.895037932904712,1.44575660953827,0.50133791063589,6.51809335323707,0.795285947051099,0,0.472674085820339,1.77383517970051,1.49319135678314,0.261958150995425,0,1.11235332835329,0,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0.347140501607594,0,2.51699661725944,11.2798397195428,2.08994966536811,2.32575083252396,0.71153252537342,1.33888245105868,2.41697590265488,0,5.12530320851156,1.47065232138347,9.72170337458112,2.05389375053383,0.22452937262617,0.225222960966644,0,0,0.732806975721629,0,0,1.3082821564276,0.993943903390637,2.15271869829786,0.794455084879313,4.30254931123221,1.41867352879343,0.560677600142307,1.06748995729705,4.44001587150888,0,0.942974704487816,0.490385709340376,0,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0.587172493218824,0.485618833104395,0.421352420106746,0,0.982674538494144,0.103325781175765,0,1.97813543422845,0.910161361938026,0.718618141816238,0.168336113954066,0.250237039743928,0,0.877955241761676,3.0648779579902,0.600952235626387,2.1552114800404,6.27863724911017,1.92201649936711,2.33125091275518,8.10245959427886,1.44273540933814,3.60696756063881,1.11670113798954,1.5189869901714,1.46155507741798,3.5340728394176,0.736399189138395,1.13152239773168,4.9701342952326,2.41805035746337,1.69560592310488,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0,0,1.56449532329816,5.14592750554308,1.38134921352481,5.57241513638375,2.16563844500876,1.53798840051797,0.674338760312407,0.482022059766964,1.65440959098591,1.08939722046203,0.949082476444386,0.674156540800822,0.98110732562673,0.769494313892781,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.857839051492628,1.09750285408626,0,1.10581869652794,1.20364978706088,0.977424915930974,0,4.3299402607582,0.34779121492523,0.352226082707465,2.16549671641611,1.85194205030644,3.61482889245737,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.626909658919938,0.581267877027924,0.383382679165211,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0.5867062865676,0.387815147273333,0,1.690605505112,2.39344304926383,2.08014873822732,0,1.41849132023278,0.532844358032199,3.71742783511184,0,0,0.65147236858747,1.42156779497018,0.791951872933429,0.301439377059586,0,2.49932477955143,0,0,0,1.19812427745791,4.59447743336456,0,0.868687840005475,1.84928690295345,0.895304816199478,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,1.08506009479894,5.19927153827018,13.0253161821928,6.15039418632345,1.52283839490527,0.601892199455438,0,2.0694614258501,0.664225598535437,0.184369168541703,2.17209036170207,0,0,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,1.48864684691266,0.767309866440312,3.92924132206303,1.28139149255701,1.53512174720011,3.37793234401576,0,2.31314540703983,0.710246901252508,0.328508624055237,2.07701771673448,2.32420756919918,0.725156697549733,2.00506470303285,0.368323955743585,1.26295892981067,2.1850940160806,2.09799063935079,0,1.69433741629712,0,2.92278449306521,0.316654886678627,5.68666920354483,1.02056223165909,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,1.30151357865721,1.13345112812495,0.27470839445503,0.165018999841176,0.574265537996172,0.650060246036521,4.82051789532479,0.290012154876366,0.462145851343933,0.15350367472613,0.413509717453592,0.537101224341368,0.435050081742686,1.19317278382541,0.0890320356467374,0.991709492165869,0.576570202095319,0.255225424989168,0.2023155617111,0.464845549297286,4.7221852024596,1.3940745403212,0.924100740528266,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,1.5250415513906,0.511795582622668,0,0,0,1.2591072030832,1.09814811894422,0.589062011728432,0,0,0,0,2.19342140668156,0,0.409499734223957,1.55545975149084,0,0,5.30751180192976,1.31535265576129,0.578775534266688,0.655894752046633,0.811641507850816,1.54911749049875,0,1.29070216983646,1.8667317792493,0.35667105148125,0,3.58882980006029,2.96365403663912,0,0.349934720244983,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,0,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr2:36764595..36764608,+ | |||
}} | }} |
Latest revision as of 09:46, 29 July 2015
Short description: | p@chr2:36764595..36764608, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:36764595..36764608, + |
Coexpression cluster: | C2699_Olfactory_Fibroblast_Endothelial_chorionic_Adipocyte_Chondrocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.60e-17 | 58 |
barrier cell | 2.60e-17 | 58 |
mesodermal cell | 1.40e-13 | 121 |
fibroblast | 3.02e-12 | 76 |
mesothelial cell | 2.62e-11 | 19 |
squamous epithelial cell | 3.08e-10 | 63 |
embryonic cell | 1.61e-08 | 250 |
endothelial cell of vascular tree | 7.15e-08 | 24 |
skin fibroblast | 7.84e-08 | 23 |
endothelial cell | 3.14e-07 | 36 |
meso-epithelial cell | 3.17e-07 | 45 |
hair follicle cell | 7.80e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.69e-10 | 68 |
vasculature | 4.98e-10 | 78 |
vascular system | 4.98e-10 | 78 |
skin of body | 3.20e-09 | 41 |
integument | 1.60e-08 | 46 |
integumental system | 1.60e-08 | 46 |
epithelial tube open at both ends | 2.10e-08 | 59 |
blood vessel | 2.10e-08 | 59 |
blood vasculature | 2.10e-08 | 59 |
vascular cord | 2.10e-08 | 59 |
artery | 4.88e-08 | 42 |
arterial blood vessel | 4.88e-08 | 42 |
arterial system | 4.88e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 2.29e-07 | 83 |
aorta | 2.33e-07 | 21 |
aortic system | 2.33e-07 | 21 |
hair follicle | 7.80e-07 | 5 |
hair follicle placode | 7.80e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.17e-07 | 5 |
myotonic disease | 4.17e-07 | 5 |
muscle tissue disease | 4.17e-07 | 5 |
myopathy | 4.17e-07 | 5 |
muscular disease | 4.17e-07 | 5 |
myotonic dystrophy | 4.17e-07 | 5 |