FFCP PHASE1:Hg19::chr2:47109897..47109901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:47109897..47109901,+ | |||
|description=CAGE_peak_at_chr2:47109897..47109901,+ | |||
|id=chr2:47109897..47109901,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.01e-28!180;CL:0000680!4.95e-21!57;CL:0000056!4.95e-21!57;CL:0000355!4.95e-21!57;CL:0000187!3.57e-17!54;CL:0000359!1.67e-16!32;CL:0000183!3.90e-15!59;CL:0000048!4.21e-15!430;CL:0000393!9.05e-15!60;CL:0000211!9.05e-15!60;CL:0000723!1.29e-14!436;CL:0000057!3.35e-14!75;CL:0000034!5.51e-14!444;CL:0000192!5.41e-13!42;CL:0000514!5.41e-13!42;CL:0000515!1.15e-09!4;CL:0002334!2.98e-08!12;CL:0002595!4.63e-08!5;CL:0000222!9.84e-08!119;CL:0000188!1.15e-07!9;CL:0002582!1.27e-07!3;CL:0002371!2.53e-07!591;CL:0002620!6.94e-07!23;CL:0002540!9.64e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000056;2.85e-19;4!CL:0002596;5.75e-18;2!CL:0000359;1.92e-15;32!CL:0002540;2.51e-13;6!CL:0000515;8.21e-12;3!CL:0000680;2.91e-11;7!CL:0000192;4.74e-10;43!CL:0000228;5.08e-10;1!CL:0002372;5.08e-10;1!CL:0002591;1.76e-09;1!CL:0002092;3.38e-08;10!CL:0002595;7.71e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.02e-19,4;CL:0002596,6.27e-18,2;CL:0000359,6.85e-16,32;CL:0000680,9.26e-16,58;CL:0000056,9.26e-16,58;CL:0000355,9.26e-16,58;CL:0002540,2.84e-13,6;CL:0000192,1.47e-11,43;CL:0000514,1.47e-11,43;CL:0000187,3.55e-11,55;CL:0000228,4.87e-10,1;CL:0002372,4.87e-10,1;CL:0000393,6.03e-10,61;CL:0000211,6.03e-10,61;CL:0002591,2.08e-09,1;CL:0002092,3.64e-08,10;CL:0000222,6.19e-08,121;CL:0002595,7.71e-08,5;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000515;2.85e-19;4!CL:0000514;4.74e-10;43!CL:0000355;7.65e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.26e-21!83;UBERON:0002329!6.26e-21!83;UBERON:0003077!6.26e-21!83;UBERON:0003059!6.26e-21!83;UBERON:0007282!6.26e-21!83;UBERON:0009618!6.26e-21!83;UBERON:0007285!6.26e-21!83;UBERON:0004290!4.61e-20!70;UBERON:0001134!3.96e-19!61;UBERON:0002036!3.96e-19!61;UBERON:0003082!3.96e-19!61;UBERON:0002385!2.85e-18!63;UBERON:0001015!2.85e-18!63;UBERON:0000383!2.85e-18!63;UBERON:0000486!2.88e-17!82;UBERON:0001637!1.31e-14!42;UBERON:0003509!1.31e-14!42;UBERON:0004572!1.31e-14!42;UBERON:0004573!6.18e-14!33;UBERON:0004571!6.18e-14!33;UBERON:0001981!8.98e-10!60;UBERON:0007500!8.98e-10!60;UBERON:0004537!8.98e-10!60;UBERON:0006965!8.98e-10!60;UBERON:0005256!9.07e-10!143;UBERON:0004872!1.02e-09!84;UBERON:0002204!2.20e-09!167;UBERON:0003834!4.63e-08!5;UBERON:0001533!4.63e-08!5;UBERON:0000055!7.85e-08!69;UBERON:0003513!3.35e-07!8;UBERON:0002049!5.64e-07!79;UBERON:0007798!5.64e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;5.75e-18;2!UBERON:0004573;1.61e-10;33!UBERON:0004571;1.61e-10;33!UBERON:0002204;3.53e-08;70!UBERON:0003834;7.71e-08;5!UBERON:0001533;7.71e-08;5!UBERON:0001637;8.61e-08;42!UBERON:0003509;8.61e-08;42!UBERON:0004572;8.61e-08;42!UBERON:0002371;6.62e-07;12!UBERON:0002385;6.76e-07;31!UBERON:0001015;6.76e-07;31!UBERON:0000383;6.76e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,6.27e-18,2;UBERON:0001134,1.26e-14,62;UBERON:0002036,1.26e-14,62;UBERON:0003082,1.26e-14,62;UBERON:0002385,4.10e-14,64;UBERON:0001015,4.10e-14,64;UBERON:0000383,4.10e-14,64;UBERON:0002329,1.52e-12,71;UBERON:0003059,1.52e-12,71;UBERON:0007282,1.52e-12,71;UBERON:0004290,1.52e-12,71;UBERON:0009618,1.52e-12,71;UBERON:0000486,1.68e-12,83;UBERON:0003077,2.41e-12,72;UBERON:0007285,2.41e-12,72;UBERON:0007524,3.77e-12,73;UBERON:0004573,6.51e-12,33;UBERON:0004571,6.51e-12,33;UBERON:0001637,7.36e-12,42;UBERON:0003509,7.36e-12,42;UBERON:0004572,7.36e-12,42;UBERON:0002204,2.13e-11,167;UBERON:0007503,2.96e-11,78;UBERON:0007500,3.89e-08,59;UBERON:0001981,3.89e-08,59;UBERON:0004537,3.89e-08,59;UBERON:0006965,3.89e-08,59;UBERON:0003834,7.71e-08,5;UBERON:0001533,7.71e-08,5;UBERON:0003498,1.89e-07,5;UBERON:0005985,1.89e-07,5;UBERON:0004872,6.10e-07,83;UBERON:0000055,6.41e-07,68 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0,1.10825646193673,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.337552664482532,0.292311015483596,0,0,0.323292113637624,0,0.201504196455281,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,1.0656887160644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.30303176000821,1.64381058040307,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0.128139149255701,0,0,0,0.616838775210622,2.66342587969691,0.821271560138091,0.519254429183621,1.27831416305955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.426133137080504,0,0,0,0,0,0,0.62962469366128,4.1822236209636,0.308033580176089,0.532306030317022,7.82939692867565,0.37064843820784,0,0,0,0,0.511795582622668,0,2.54562598340749,3.13979456079692,0,0,0,0,1.58510321173008,0.421258456238981,0,0.731140468893853,3.16950440270266,0,0,1.13008116620243,6.06501877900737,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0.467426619694449,1.66441758450784,9.09134425320428,0.754703705257725,3.55924488638614,0,2.7221566277383,0.932623203496683,0.295710299979268,0.159296767163702,0,0,2.48823724704513,0.265841714557995,0,0.300515217994437,0,0,0.909243296012797,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0,1.10825646193673,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.337552664482532,0.292311015483596,0,0,0.323292113637624,0,0.201504196455281,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,1.0656887160644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.30303176000821,1.64381058040307,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0.128139149255701,0,0,0,0.616838775210622,2.66342587969691,0.821271560138091,0.519254429183621,1.27831416305955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.426133137080504,0,0,0,0,0,0,0.62962469366128,4.1822236209636,0.308033580176089,0.532306030317022,7.82939692867565,0.37064843820784,0,0,0,0,0.511795582622668,0,2.54562598340749,3.13979456079692,0,0,0,0,1.58510321173008,0.421258456238981,0,0.731140468893853,3.16950440270266,0,0,1.13008116620243,6.06501877900737,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0.467426619694449,1.66441758450784,9.09134425320428,0.754703705257725,3.55924488638614,0,2.7221566277383,0.932623203496683,0.295710299979268,0.159296767163702,0,0,2.48823724704513,0.265841714557995,0,0.300515217994437,0,0,0.909243296012797,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:47109897..47109901,+ | |||
}} | }} |
Latest revision as of 10:32, 29 July 2015
Short description: | p@chr2:47109897..47109901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47109897..47109901, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.02e-19 | 4 |
smooth muscle cell of the carotid artery | 6.27e-18 | 2 |
vascular associated smooth muscle cell | 6.85e-16 | 32 |
muscle precursor cell | 9.26e-16 | 58 |
myoblast | 9.26e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.26e-16 | 58 |
mesenchymal stem cell of the bone marrow | 2.84e-13 | 6 |
smooth muscle cell | 1.47e-11 | 43 |
smooth muscle myoblast | 1.47e-11 | 43 |
muscle cell | 3.55e-11 | 55 |
multinucleate cell | 4.87e-10 | 1 |
myotube | 4.87e-10 | 1 |
electrically responsive cell | 6.03e-10 | 61 |
electrically active cell | 6.03e-10 | 61 |
smooth muscle cell of the pulmonary artery | 2.08e-09 | 1 |
bone marrow cell | 3.64e-08 | 10 |
mesodermal cell | 6.19e-08 | 121 |
smooth muscle cell of the subclavian artery | 7.71e-08 | 5 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 6.27e-18 | 2 |
skeletal muscle tissue | 1.26e-14 | 62 |
striated muscle tissue | 1.26e-14 | 62 |
myotome | 1.26e-14 | 62 |
muscle tissue | 4.10e-14 | 64 |
musculature | 4.10e-14 | 64 |
musculature of body | 4.10e-14 | 64 |
somite | 1.52e-12 | 71 |
presomitic mesoderm | 1.52e-12 | 71 |
presumptive segmental plate | 1.52e-12 | 71 |
dermomyotome | 1.52e-12 | 71 |
trunk paraxial mesoderm | 1.52e-12 | 71 |
multilaminar epithelium | 1.68e-12 | 83 |
paraxial mesoderm | 2.41e-12 | 72 |
presumptive paraxial mesoderm | 2.41e-12 | 72 |
dense mesenchyme tissue | 3.77e-12 | 73 |
systemic artery | 6.51e-12 | 33 |
systemic arterial system | 6.51e-12 | 33 |
artery | 7.36e-12 | 42 |
arterial blood vessel | 7.36e-12 | 42 |
arterial system | 7.36e-12 | 42 |
musculoskeletal system | 2.13e-11 | 167 |
epithelial vesicle | 2.96e-11 | 78 |
epithelial tube open at both ends | 3.89e-08 | 59 |
blood vessel | 3.89e-08 | 59 |
blood vasculature | 3.89e-08 | 59 |
vascular cord | 3.89e-08 | 59 |
thoracic segment blood vessel | 7.71e-08 | 5 |
subclavian artery | 7.71e-08 | 5 |
heart blood vessel | 1.89e-07 | 5 |
coronary vessel | 1.89e-07 | 5 |
splanchnic layer of lateral plate mesoderm | 6.10e-07 | 83 |
vessel | 6.41e-07 | 68 |