FFCP PHASE1:Hg19::chr4:189030755..189030765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=205860 | |EntrezGene=205860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26378 | |HGNC=26378 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000394461_5end | |||
|cluster_id=chr4:189030755..189030765,- | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_1_at_TRIML2_5end | |||
|id=chr4:189030755..189030765,- | |||
|ontology_enrichment_celltype=CL:0000066!2.65e-23!254;CL:0000039!2.86e-16!7;CL:0000586!2.86e-16!7;CL:0002322!2.26e-12!5;CL:0000076!6.41e-09!62;CL:0002621!1.13e-07!3;CL:0002159!2.62e-07!13;CL:0002150!4.05e-07!3;CL:0000861!4.05e-07!3;CL:0002166!4.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.94e-29;5!CL:0000039;1.20e-14;7!CL:0000586;1.20e-14;7!CL:0002097;6.91e-13;2!CL:0002321;1.22e-09;15!CL:0002138;1.29e-09;6!CL:0000540;1.39e-09;6!CL:0000404;1.39e-09;6!CL:0000174;6.99e-09;3!CL:0002621;1.08e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.95e-29,5;CL:0000039,1.18e-14,7;CL:0000586,1.18e-14,7;CL:0002097,8.03e-13,2;CL:0000066,1.12e-10,253;CL:0005020,1.37e-09,6;CL:0002138,1.37e-09,6;CL:0005022,1.37e-09,6;CL:0000540,1.45e-09,6;CL:0000031,1.45e-09,6;CL:0000404,1.45e-09,6;CL:0000174,7.72e-09,3;CL:0002621,1.10e-08,3;CL:0000047,2.78e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.78e-10;10!UBERON:0005564;2.78e-10;10!CL:0005022;1.29e-09;6!CL:0000031;1.39e-09;6 | |||
|ontology_enrichment_disease=DOID:0050687!7.19e-15!143;DOID:305!6.70e-14!106;DOID:3095!1.25e-10!22;DOID:2994!1.25e-10!22;DOID:162!7.60e-09!235;DOID:14566!1.99e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.25e-09;22!DOID:2994;1.25e-09;22!DOID:6193;3.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.22e-09,22;DOID:2994,1.22e-09,22;DOID:305,2.91e-08,106;DOID:0050687,2.24e-07,143;DOID:6193,3.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.85e-13;8!UBERON:0003135;2.36e-09;11!UBERON:0002369;6.99e-09;3!UBERON:0001235;6.99e-09;3!UBERON:0006858;6.99e-09;3!UBERON:0001949;1.08e-08;3!UBERON:0001473;2.55e-07;8!UBERON:0004536;2.55e-07;8!UBERON:0006558;2.55e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.73e-13,8;UBERON:0003135,2.34e-09,11;UBERON:0002369,7.72e-09,3;UBERON:0001235,7.72e-09,3;UBERON:0006858,7.72e-09,3;UBERON:0001949,1.10e-08,3;UBERON:0001473,2.67e-07,8;UBERON:0004536,2.67e-07,8;UBERON:0006558,2.67e-07,8 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35941786920128,7.47109151642091,4.68608857870538,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,3.28543450377605,2.72746120590835,0.573609190778008,5.73276418809098,1.32529768321485,2.5562667431294,3.73179798055334,6.30802127189071,2.55484151353081,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80451769533479,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.680374821106063,1.72732732881711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0.179515288819544,0.977826347298073,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.587954384486266,0,0,3.78369271437556,0.580537987734511,0.65780385377567,0.410577285266046,0,0,0,1.78154502040776,0.397429223405979,0,0.977756913674015,0.881747022766871,0,0.599428828746391,0,0.916292769327325,0,0,16.5255872302025,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,3.3758161177654,6.73943239326446,4.56984371832104,0,0,0,0,0,0,0.105600336519406,2.51002275065983,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,3.93499727133958,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11881813448034,6.6476893326227,0,0,0.694567422971502,0.244736704506468,0.179088841081487,0,0,0,0,0,0,4.83602478423678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,1.84841065840541,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7042153817649,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,5.02621631032999,4.94124153944604,10.912804782392,16.5674791264648,15.8978176195282,57.4120264979539,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@TRIML2 | |||
}} | }} |
Latest revision as of 05:57, 17 September 2015
Short description: | p1@TRIML2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIML2_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_ENST00000394461_5end |
EntrezGene: | TRIML2 |
HGNC: | 26378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.95e-29 | 5 |
germ line cell | 1.18e-14 | 7 |
germ cell | 1.18e-14 | 7 |
cortical cell of adrenal gland | 8.03e-13 | 2 |
epithelial cell | 1.12e-10 | 253 |
lymphangioblast | 1.37e-09 | 6 |
endothelial cell of lymphatic vessel | 1.37e-09 | 6 |
vascular lymphangioblast | 1.37e-09 | 6 |
neuron | 1.45e-09 | 6 |
neuroblast | 1.45e-09 | 6 |
electrically signaling cell | 1.45e-09 | 6 |
steroid hormone secreting cell | 7.72e-09 | 3 |
gingival epithelial cell | 1.10e-08 | 3 |
neuronal stem cell | 2.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 7.73e-13 | 8 |
male reproductive organ | 2.34e-09 | 11 |
adrenal gland | 7.72e-09 | 3 |
adrenal cortex | 7.72e-09 | 3 |
adrenal/interrenal gland | 7.72e-09 | 3 |
gingival epithelium | 1.10e-08 | 3 |
lymphatic vessel | 2.67e-07 | 8 |
lymph vasculature | 2.67e-07 | 8 |
lymphatic part of lymphoid system | 2.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.22e-09 | 22 |
germ cell cancer | 1.22e-09 | 22 |
carcinoma | 2.91e-08 | 106 |
cell type cancer | 2.24e-07 | 143 |
epithelioid sarcoma | 3.02e-07 | 1 |