FFCP PHASE1:Hg19::chr5:146833397..146833415,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:146833397..146833415,- to FFCP PHASE1:Hg19::chr5:146833397..146833415,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=Q14195 | |UniProt=Q14195 | ||
|association_with_transcript=106bp_to_ENST00000398514_5end | |||
|cluster_id=chr5:146833397..146833415,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_DPYSL3_5end | |||
|id=chr5:146833397..146833415,- | |||
|ontology_enrichment_celltype=CL:0002319!2.07e-13!25;CL:0000047!2.61e-11!8;CL:0000133!5.00e-10!59;CL:0000540!6.16e-09!6;CL:0000031!6.16e-09!6;CL:0000404!6.16e-09!6;CL:0002322!1.10e-07!5;CL:0000221!5.40e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.94e-21;5!CL:0002319;1.08e-18;25!CL:0000540;3.17e-18;6!CL:0000404;3.17e-18;6!CL:0000064;1.07e-09;3!CL:0000067;1.07e-09;3!CL:0005012;1.07e-09;3!CL:0002304;1.07e-09;3!CL:0000075;2.62e-08;27!CL:0000710;4.17e-08;20!CL:0002594;1.75e-07;4!CL:0002321;2.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.62e-22,5;CL:0000047,5.01e-21,8;CL:0000133,1.22e-18,59;CL:0002319,1.34e-18,25;CL:0000540,3.18e-18,6;CL:0000031,3.18e-18,6;CL:0000404,3.18e-18,6;CL:0000221,6.87e-15,72;CL:0000064,1.22e-09,3;CL:0000067,1.22e-09,3;CL:0005012,1.22e-09,3;CL:0002304,1.22e-09,3;CL:0000075,2.50e-08,27;CL:0000710,3.63e-08,20;CL:0002594,2.14e-07,4;CL:0000333,9.08e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;3.17e-18;6!CL:0000133;2.96e-10;59!UBERON:0006238;4.33e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.73e-22!82;UBERON:0005743!2.05e-21!86;UBERON:0000073!5.02e-19!94;UBERON:0001016!5.02e-19!94;UBERON:0004121!1.02e-14!169;UBERON:0000924!1.56e-14!173;UBERON:0006601!1.56e-14!173;UBERON:0003075!3.16e-14!86;UBERON:0007284!3.16e-14!86;UBERON:0002346!8.65e-14!90;UBERON:0000955!6.54e-13!69;UBERON:0006238!6.54e-13!69;UBERON:0001049!1.07e-10!57;UBERON:0005068!1.07e-10!57;UBERON:0006241!1.07e-10!57;UBERON:0007135!1.07e-10!57;UBERON:0007023!1.98e-10!115;UBERON:0000153!5.17e-10!129;UBERON:0007811!5.17e-10!129;UBERON:0002616!9.12e-10!59;UBERON:0000033!1.75e-09!123;UBERON:0001893!1.79e-09!34;UBERON:0002020!2.09e-09!34;UBERON:0003528!2.09e-09!34;UBERON:0002791!8.03e-09!33;UBERON:0003056!1.33e-08!61;UBERON:0000922!1.34e-08!612;UBERON:0001869!1.66e-08!32;UBERON:0000025!2.12e-08!194;UBERON:0000468!2.92e-08!659;UBERON:0000477!6.30e-08!286;UBERON:0004111!1.16e-07!241;UBERON:0002780!1.24e-07!41;UBERON:0001890!1.24e-07!41;UBERON:0006240!1.24e-07!41;UBERON:0000483!2.11e-07!309;UBERON:0003080!2.55e-07!42;UBERON:0000956!2.55e-07!25;UBERON:0000203!2.55e-07!25;UBERON:0000119!3.90e-07!312;UBERON:0000467!4.01e-07!625;UBERON:0000480!4.72e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.12e-10;49!UBERON:0001778;1.07e-09;3!UBERON:0001775;1.07e-09;3!UBERON:0000488;1.75e-07;4!UBERON:0001310;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.87e-13,81;UBERON:0001016,1.05e-11,89;UBERON:0001778,1.22e-09,3;UBERON:0001775,1.22e-09,3;UBERON:0004121,8.78e-08,171;UBERON:0000924,8.78e-08,171;UBERON:0006601,8.78e-08,171;UBERON:0000488,1.94e-07,4;UBERON:0001310,2.14e-07,4 | |||
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| ||
|short_description=p17@DPYSL3 | |||
}} | }} |
Latest revision as of 22:07, 15 September 2015
Short description: | p17@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_DPYSL3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 106bp_to_ENST00000398514_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | Q14195 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.62e-22 | 5 |
neuronal stem cell | 5.01e-21 | 8 |
neurectodermal cell | 1.22e-18 | 59 |
neural cell | 1.34e-18 | 25 |
neuron | 3.18e-18 | 6 |
neuroblast | 3.18e-18 | 6 |
electrically signaling cell | 3.18e-18 | 6 |
ectodermal cell | 6.87e-15 | 72 |
ciliated cell | 1.22e-09 | 3 |
ciliated epithelial cell | 1.22e-09 | 3 |
multi-ciliated epithelial cell | 1.22e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.22e-09 | 3 |
columnar/cuboidal epithelial cell | 2.50e-08 | 27 |
neurecto-epithelial cell | 3.63e-08 | 20 |
smooth muscle cell of the umbilical artery | 2.14e-07 | 4 |
migratory neural crest cell | 9.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.87e-13 | 81 |
nervous system | 1.05e-11 | 89 |
ciliary epithelium | 1.22e-09 | 3 |
ciliary body | 1.22e-09 | 3 |
ectoderm-derived structure | 8.78e-08 | 171 |
ectoderm | 8.78e-08 | 171 |
presumptive ectoderm | 8.78e-08 | 171 |
atypical epithelium | 1.94e-07 | 4 |
umbilical artery | 2.14e-07 | 4 |