FFCP PHASE1:Hg19::chr5:1799915..1799930,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:1799915..1799930,- to FFCP PHASE1:Hg19::chr5:1799915..1799930,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64979 | |EntrezGene=64979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14490 | |HGNC=14490 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0J6 | |UniProt=Q9P0J6 | ||
|association_with_transcript=21bp_to_ENST00000382647_5end | |||
|cluster_id=chr5:1799915..1799930,- | |||
|description=CAGE_peak_3_at_MRPL36_5end | |||
|id=chr5:1799915..1799930,- | |||
|ontology_enrichment_celltype=CL:0000548!3.05e-29!679;CL:0000004!3.05e-29!679;CL:0000255!3.05e-29!679;CL:0000012!1.12e-28!682;CL:0002321!1.06e-23!248;CL:0000220!2.70e-23!246;CL:0000055!6.67e-22!180;CL:0000144!1.29e-18!625;CL:0000222!2.45e-17!119;CL:0000003!1.50e-15!722;CL:0000183!9.14e-15!59;CL:0002371!4.20e-14!591;CL:0000066!1.06e-13!254;CL:0000680!2.07e-13!57;CL:0000056!2.07e-13!57;CL:0000355!2.07e-13!57;CL:0000393!7.57e-13!60;CL:0000211!7.57e-13!60;CL:0000187!9.68e-13!54;CL:0000192!4.83e-12!42;CL:0000514!4.83e-12!42;CL:0000359!2.92e-08!32;CL:0000063!3.66e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.74e-08;43!CL:0000359;7.01e-08;32!CL:0000187;1.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.44e-23,250;CL:0000222,3.47e-17,121;CL:0000066,8.74e-14,253;CL:0000680,6.85e-13,58;CL:0000056,6.85e-13,58;CL:0000355,6.85e-13,58;CL:0000393,2.32e-12,61;CL:0000211,2.32e-12,61;CL:0000187,3.21e-12,55;CL:0000192,1.91e-11,43;CL:0000514,1.91e-11,43;CL:0000359,2.56e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.74e-08;43!CL:0000355;2.51e-07;58 | |||
|ontology_enrichment_disease=DOID:14566!6.19e-08!239;DOID:162!1.81e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.41e-08,239;DOID:162,2.16e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.69e-15!82;UBERON:0005256!1.42e-14!143;UBERON:0000914!2.89e-13!83;UBERON:0002329!2.89e-13!83;UBERON:0003077!2.89e-13!83;UBERON:0003059!2.89e-13!83;UBERON:0007282!2.89e-13!83;UBERON:0009618!2.89e-13!83;UBERON:0007285!2.89e-13!83;UBERON:0004290!6.65e-13!70;UBERON:0001134!1.69e-11!61;UBERON:0002036!1.69e-11!61;UBERON:0003082!1.69e-11!61;UBERON:0002385!1.45e-10!63;UBERON:0001015!1.45e-10!63;UBERON:0000383!1.45e-10!63;UBERON:0002100!2.15e-10!216;UBERON:0003914!4.73e-10!118;UBERON:0003104!4.99e-10!238;UBERON:0009142!4.99e-10!238;UBERON:0000490!1.77e-09!138;UBERON:0002049!2.37e-08!79;UBERON:0007798!2.37e-08!79;UBERON:0004872!1.87e-07!84;UBERON:0001637!3.50e-07!42;UBERON:0003509!3.50e-07!42;UBERON:0004572!3.50e-07!42;UBERON:0001737!3.71e-07!9;UBERON:0001981!9.97e-07!60;UBERON:0007500!9.97e-07!60;UBERON:0004537!9.97e-07!60;UBERON:0006965!9.97e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.16e-07;9!UBERON:0001557;3.16e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.27e-14,83;UBERON:0007503,2.20e-14,78;UBERON:0002329,1.82e-12,71;UBERON:0003059,1.82e-12,71;UBERON:0007282,1.82e-12,71;UBERON:0004290,1.82e-12,71;UBERON:0009618,1.82e-12,71;UBERON:0005256,2.10e-12,122;UBERON:0007524,2.94e-12,73;UBERON:0003077,3.99e-12,72;UBERON:0007285,3.99e-12,72;UBERON:0001134,4.70e-11,62;UBERON:0002036,4.70e-11,62;UBERON:0003082,4.70e-11,62;UBERON:0003914,1.95e-10,117;UBERON:0000490,2.58e-10,148;UBERON:0002385,3.71e-10,64;UBERON:0001015,3.71e-10,64;UBERON:0000383,3.71e-10,64;UBERON:0002100,9.31e-10,199;UBERON:0003104,1.78e-09,160;UBERON:0009142,1.78e-09,160;UBERON:0002049,1.98e-08,78;UBERON:0007798,1.98e-08,78;UBERON:0004872,1.90e-07,83;UBERON:0001637,3.27e-07,42;UBERON:0003509,3.27e-07,42;UBERON:0004572,3.27e-07,42;UBERON:0001737,3.49e-07,9;UBERON:0000119,4.31e-07,309;UBERON:0007500,8.43e-07,59;UBERON:0001981,8.43e-07,59;UBERON:0004537,8.43e-07,59;UBERON:0006965,8.43e-07,59;UBERON:0000483,9.30e-07,306 | |||
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| ||
|short_description=p3@MRPL36 | |||
}} | }} |
Latest revision as of 10:36, 17 September 2015
Short description: | p3@MRPL36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRPL36_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000382647_5end |
EntrezGene: | MRPL36 |
HGNC: | 14490 |
UniProt: | Q9P0J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.44e-23 | 250 |
mesodermal cell | 3.47e-17 | 121 |
epithelial cell | 8.74e-14 | 253 |
muscle precursor cell | 6.85e-13 | 58 |
myoblast | 6.85e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.85e-13 | 58 |
electrically responsive cell | 2.32e-12 | 61 |
electrically active cell | 2.32e-12 | 61 |
muscle cell | 3.21e-12 | 55 |
smooth muscle cell | 1.91e-11 | 43 |
smooth muscle myoblast | 1.91e-11 | 43 |
vascular associated smooth muscle cell | 2.56e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.27e-14 | 83 |
epithelial vesicle | 2.20e-14 | 78 |
somite | 1.82e-12 | 71 |
presomitic mesoderm | 1.82e-12 | 71 |
presumptive segmental plate | 1.82e-12 | 71 |
dermomyotome | 1.82e-12 | 71 |
trunk paraxial mesoderm | 1.82e-12 | 71 |
trunk mesenchyme | 2.10e-12 | 122 |
dense mesenchyme tissue | 2.94e-12 | 73 |
paraxial mesoderm | 3.99e-12 | 72 |
presumptive paraxial mesoderm | 3.99e-12 | 72 |
skeletal muscle tissue | 4.70e-11 | 62 |
striated muscle tissue | 4.70e-11 | 62 |
myotome | 4.70e-11 | 62 |
epithelial tube | 1.95e-10 | 117 |
unilaminar epithelium | 2.58e-10 | 148 |
muscle tissue | 3.71e-10 | 64 |
musculature | 3.71e-10 | 64 |
musculature of body | 3.71e-10 | 64 |
trunk | 9.31e-10 | 199 |
mesenchyme | 1.78e-09 | 160 |
entire embryonic mesenchyme | 1.78e-09 | 160 |
vasculature | 1.98e-08 | 78 |
vascular system | 1.98e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.90e-07 | 83 |
artery | 3.27e-07 | 42 |
arterial blood vessel | 3.27e-07 | 42 |
arterial system | 3.27e-07 | 42 |
larynx | 3.49e-07 | 9 |
cell layer | 4.31e-07 | 309 |
epithelial tube open at both ends | 8.43e-07 | 59 |
blood vessel | 8.43e-07 | 59 |
blood vasculature | 8.43e-07 | 59 |
vascular cord | 8.43e-07 | 59 |
epithelium | 9.30e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.41e-08 | 239 |
cancer | 2.16e-07 | 235 |