FFCP PHASE1:Hg19::chr7:100026280..100026331,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100026280..100026331,- to FFCP PHASE1:Hg19::chr7:100026280..100026331,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55063 | |EntrezGene=55063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23486 | |HGNC=23486 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUQ2,C9J435,Q9H0M4 | |UniProt=B4DUQ2,C9J435,Q9H0M4 | ||
|association_with_transcript=0bp_to_ENST00000324725,ENST00000360951,ENST00000379559,ENST00000398027,NM_017984,uc003uut.2,uc011kjr.1,uc011kjt.1,uc011kju.1_5end | |||
|cluster_id=chr7:100026280..100026331,- | |||
|description=CAGE_peak_1_at_ZCWPW1_5end | |||
|id=chr7:100026280..100026331,- | |||
|ontology_enrichment_celltype=CL:0000738!1.29e-20!140;CL:0002031!5.03e-15!124;CL:0002087!2.25e-14!119;CL:0000037!3.92e-14!172;CL:0000566!3.92e-14!172;CL:0000988!2.05e-12!182;CL:0002032!3.08e-12!165;CL:0000837!3.08e-12!165;CL:0000766!4.02e-10!76;CL:0000838!3.58e-09!52;CL:0000542!7.78e-09!53;CL:0000051!7.78e-09!53;CL:0000557!1.40e-07!71;CL:0002057!6.34e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.56e-22,136;CL:0002031,9.76e-17,120;CL:0002087,7.12e-16,115;CL:0000037,5.74e-15,168;CL:0000988,2.38e-13,177;CL:0002032,5.86e-13,161;CL:0000837,5.86e-13,161;CL:0000766,2.13e-12,72;CL:0000557,1.84e-09,67;CL:0000838,8.11e-09,52;CL:0000542,2.71e-08,53;CL:0000051,2.71e-08,53;CL:0000839,2.85e-08,66;CL:0002009,1.01e-07,61;CL:0002194,2.44e-07,59;CL:0000576,2.44e-07,59;CL:0000040,2.44e-07,59;CL:0000559,2.44e-07,59;CL:0000860,3.15e-07,42;CL:0002057,3.15e-07,42;CL:0000236,7.19e-07,14;CL:0000791,9.29e-07,18;CL:0000789,9.29e-07,18;CL:0002420,9.29e-07,18;CL:0002419,9.29e-07,18;CL:0000790,9.29e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-17!115;UBERON:0002390!4.94e-10!102;UBERON:0003061!4.94e-10!102;UBERON:0002193!2.26e-08!112;UBERON:0001049!2.89e-07!57;UBERON:0005068!2.89e-07!57;UBERON:0006241!2.89e-07!57;UBERON:0007135!2.89e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-17,114;UBERON:0002390,6.20e-12,98;UBERON:0003061,6.20e-12,98;UBERON:0002193,6.40e-10,108;UBERON:0002371,5.09e-08,76;UBERON:0001474,1.41e-07,82;UBERON:0002405,1.95e-07,93;UBERON:0001049,3.95e-07,56;UBERON:0005068,3.95e-07,56;UBERON:0006241,3.95e-07,56;UBERON:0007135,3.95e-07,56 | |||
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| ||
|short_description=p1@ZCWPW1 | |||
}} | }} |
Latest revision as of 06:48, 20 September 2015
Short description: | p1@ZCWPW1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZCWPW1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324725, ENST00000360951, ENST00000379559, ENST00000398027, NM_017984, uc003uut.2, uc011kjr.1, uc011kjt.1, uc011kju.1_5end |
EntrezGene: | ZCWPW1 |
HGNC: | 23486 |
UniProt: | B4DUQ2C9J435Q9H0M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.56e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 9.76e-17 | 120 |
nongranular leukocyte | 7.12e-16 | 115 |
hematopoietic stem cell | 5.74e-15 | 168 |
hematopoietic cell | 2.38e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.86e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.86e-13 | 161 |
myeloid leukocyte | 2.13e-12 | 72 |
granulocyte monocyte progenitor cell | 1.84e-09 | 67 |
lymphoid lineage restricted progenitor cell | 8.11e-09 | 52 |
lymphocyte | 2.71e-08 | 53 |
common lymphoid progenitor | 2.71e-08 | 53 |
myeloid lineage restricted progenitor cell | 2.85e-08 | 66 |
macrophage dendritic cell progenitor | 1.01e-07 | 61 |
monopoietic cell | 2.44e-07 | 59 |
monocyte | 2.44e-07 | 59 |
monoblast | 2.44e-07 | 59 |
promonocyte | 2.44e-07 | 59 |
classical monocyte | 3.15e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.15e-07 | 42 |
B cell | 7.19e-07 | 14 |
mature alpha-beta T cell | 9.29e-07 | 18 |
alpha-beta T cell | 9.29e-07 | 18 |
immature T cell | 9.29e-07 | 18 |
mature T cell | 9.29e-07 | 18 |
immature alpha-beta T cell | 9.29e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.03e-17 | 114 |
hematopoietic system | 6.20e-12 | 98 |
blood island | 6.20e-12 | 98 |
hemolymphoid system | 6.40e-10 | 108 |
bone marrow | 5.09e-08 | 76 |
bone element | 1.41e-07 | 82 |
immune system | 1.95e-07 | 93 |
neural tube | 3.95e-07 | 56 |
neural rod | 3.95e-07 | 56 |
future spinal cord | 3.95e-07 | 56 |
neural keel | 3.95e-07 | 56 |