FFCP PHASE1:Hg19::chr7:99775511..99775518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10734 | |EntrezGene=10734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11356 | |HGNC=11356 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCX1,Q9UJ98 | |UniProt=E9PCX1,Q9UJ98 | ||
|association_with_transcript=-19bp_to_ENST00000339784,ENST00000379577,NM_012447,uc003utx.1,uc010lgs.1_5end | |||
|cluster_id=chr7:99775511..99775518,+ | |||
|description=CAGE_peak_5_at_STAG3_5end | |||
|id=chr7:99775511..99775518,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.71e-07!7;CL:0000586!3.71e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.24e-20;7!CL:0000586;2.24e-20;7!CL:0002535;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.17e-20,7;CL:0000586,2.17e-20,7;CL:0002535,4.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.64e-25;10!UBERON:0005564;5.64e-25;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;5.93e-09;2!DOID:1907;5.93e-09;2!DOID:3095;6.96e-07;22!DOID:2994;6.96e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,8.74e-09,2;DOID:1907,8.74e-09,2;DOID:3095,6.89e-07,22;DOID:2994,6.89e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.62e-12!57;UBERON:0005068!1.62e-12!57;UBERON:0006241!1.62e-12!57;UBERON:0007135!1.62e-12!57;UBERON:0001893!7.38e-11!34;UBERON:0002346!3.95e-10!90;UBERON:0002791!4.60e-10!33;UBERON:0007023!6.10e-10!115;UBERON:0002020!1.15e-09!34;UBERON:0003528!1.15e-09!34;UBERON:0002616!1.28e-09!59;UBERON:0002780!1.56e-09!41;UBERON:0001890!1.56e-09!41;UBERON:0006240!1.56e-09!41;UBERON:0002619!2.18e-09!22;UBERON:0003075!3.14e-09!86;UBERON:0007284!3.14e-09!86;UBERON:0003080!3.35e-09!42;UBERON:0001950!5.35e-09!20;UBERON:0001869!5.54e-09!32;UBERON:0000955!7.65e-09!69;UBERON:0006238!7.65e-09!69;UBERON:0000073!2.57e-08!94;UBERON:0001016!2.57e-08!94;UBERON:0005743!4.23e-08!86;UBERON:0001017!4.65e-08!82;UBERON:0000956!5.93e-08!25;UBERON:0000203!5.93e-08!25;UBERON:0000924!2.18e-07!173;UBERON:0006601!2.18e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.22e-31;8!UBERON:0003135;9.59e-23;11!UBERON:0000991;4.39e-12;21!UBERON:0003101;1.51e-11;22!UBERON:0000079;1.51e-11;22!UBERON:0006955;5.93e-09;2!UBERON:0004801;5.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.36e-31,8;UBERON:0003135,8.13e-23,11;UBERON:0000991,4.03e-12,21;UBERON:0009196,4.03e-12,21;UBERON:0009117,4.03e-12,21;UBERON:0005564,4.03e-12,21;UBERON:0004176,1.39e-11,22;UBERON:0003101,1.39e-11,22;UBERON:0000079,1.39e-11,22;UBERON:0006955,4.02e-09,2;UBERON:0004801,4.02e-09,2;UBERON:0003133,4.31e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0.71623345421307,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,1.16684937732704,0.760531603454056,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82824333818845,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.846733320657845,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906496732161005,0,0,0.387848869084652,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.770479321629213,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,1.41696576325585,0.319267718114302,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.253663240775627,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.271878931907327,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,1.30165200803622,0.852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,1.50962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,2.13773924212448,0.18378979906969,1.75495277504663,1.21245917149183,2.41167717140561,0,0,0.639701945702943,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | 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| ||
|short_description=p5@STAG3 | |||
}} | }} |
Latest revision as of 17:53, 24 September 2015
Short description: | p5@STAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STAG3_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000339784, ENST00000379577, NM_012447, uc003utx.1, uc010lgs.1_5end |
EntrezGene: | STAG3 |
HGNC: | 11356 |
UniProt: | E9PCX1Q9UJ98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.17e-20 | 7 |
germ cell | 2.17e-20 | 7 |
epithelial cell of cervix | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.36e-31 | 8 |
male reproductive organ | 8.13e-23 | 11 |
gonad | 4.03e-12 | 21 |
indifferent external genitalia | 4.03e-12 | 21 |
indifferent gonad | 4.03e-12 | 21 |
gonad primordium | 4.03e-12 | 21 |
external genitalia | 1.39e-11 | 22 |
male organism | 1.39e-11 | 22 |
male reproductive system | 1.39e-11 | 22 |
uterine epithelium | 4.02e-09 | 2 |
cervix epithelium | 4.02e-09 | 2 |
reproductive organ | 4.31e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 8.74e-09 | 2 |
malignant fibroxanthoma | 8.74e-09 | 2 |
germ cell and embryonal cancer | 6.89e-07 | 22 |
germ cell cancer | 6.89e-07 | 22 |