FFCP PHASE1:Hg19::chr8:139926246..139926269,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:139926246..139926269,- to FFCP PHASE1:Hg19::chr8:139926246..139926269,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=169044 | |EntrezGene=169044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22989 | |HGNC=22989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484387_5end | |||
|cluster_id=chr8:139926246..139926269,- | |||
|coexpression_cluster_id=C2919 | |||
|description=CAGE_peak_2_at_COL22A1_5end | |||
|id=chr8:139926246..139926269,- | |||
|ontology_enrichment_celltype=CL:0000221!2.70e-08!71;CL:0002321!7.53e-08!248;CL:0000220!2.10e-07!246;CL:0000128!2.86e-07!7;CL:0000126!2.86e-07!7;CL:0000127!2.86e-07!7;CL:0002453!2.86e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.86e-10;7!CL:0000126;5.86e-10;7!CL:0000127;5.86e-10;7!CL:0000244;1.27e-09;4!CL:0000731;1.27e-09;4!CL:0002621;2.93e-07;3!CL:0002605;7.10e-07;3!CL:0002319;8.14e-07;25!CL:0002582;8.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,6.97e-10,7;CL:0000126,6.97e-10,7;CL:0000127,6.97e-10,7;CL:0002453,6.97e-10,7;CL:0000244,1.21e-09,4;CL:0000731,1.21e-09,4;CL:0002621,3.82e-07,3;CL:0002605,6.30e-07,3;CL:0002319,8.57e-07,25;CL:0002582,9.87e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!3.65e-11!309;UBERON:0000119!9.22e-11!312;UBERON:0004111!1.40e-10!241;UBERON:0000922!7.01e-10!612;UBERON:0000468!2.58e-09!659;UBERON:0000025!3.89e-09!194;UBERON:0000480!2.36e-08!626;UBERON:0000477!4.11e-08!286;UBERON:0000467!4.77e-08!625;UBERON:0002050!9.44e-08!605;UBERON:0005423!9.44e-08!605;UBERON:0000923!1.98e-07!604;UBERON:0005291!1.98e-07!604;UBERON:0006598!1.98e-07!604;UBERON:0002532!1.98e-07!604;UBERON:0000481!2.40e-07!347;UBERON:0004573!3.31e-07!33;UBERON:0004571!3.31e-07!33;UBERON:0000475!5.25e-07!365;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15;UBERON:0004733!8.74e-07!12;UBERON:0002028!8.74e-07!12;UBERON:0007277!8.74e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.53e-08;12!UBERON:0000365;1.15e-07;5!UBERON:0001949;2.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.11e-07,5;UBERON:0001949,3.82e-07,3 | |||
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| ||
|short_description=p2@COL22A1 | |||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p2@COL22A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL22A1_5end |
Coexpression cluster: | C2919_smallcell_Smooth_skeletal_small_Urothelial_pituitary_gastrointestinal |
Association with transcript: | 0bp_to_ENST00000484387_5end |
EntrezGene: | COL22A1 |
HGNC: | 22989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 6.97e-10 | 7 |
macroglial cell | 6.97e-10 | 7 |
astrocyte | 6.97e-10 | 7 |
oligodendrocyte precursor cell | 6.97e-10 | 7 |
transitional epithelial cell | 1.21e-09 | 4 |
urothelial cell | 1.21e-09 | 4 |
gingival epithelial cell | 3.82e-07 | 3 |
astrocyte of the cerebral cortex | 6.30e-07 | 3 |
neural cell | 8.57e-07 | 25 |
visceral preadipocyte | 9.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.11e-07 | 5 |
gingival epithelium | 3.82e-07 | 3 |