FFCP PHASE1:Hg19::chr8:24774356..24774378,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4741 | |EntrezGene=4741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7734 | |HGNC=7734 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK51 | |UniProt=Q9UK51 | ||
|association_with_transcript=-301bp_to_AF181990_5end | |||
|cluster_id=chr8:24774356..24774378,+ | |||
|description=CAGE_peak_19_at_NEFM_5end | |||
|id=chr8:24774356..24774378,+ | |||
|ontology_enrichment_celltype=CL:0000623!1.81e-11!3;CL:0000825!1.81e-11!3;CL:0000540!6.51e-10!6;CL:0000031!6.51e-10!6;CL:0000404!6.51e-10!6;CL:0000047!1.92e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.53e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.26e-11;4!DOID:169;5.54e-08;6!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.42e-11,4;DOID:169,5.54e-08,6;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.65e-37!82;UBERON:0001049!2.45e-36!57;UBERON:0005068!2.45e-36!57;UBERON:0006241!2.45e-36!57;UBERON:0007135!2.45e-36!57;UBERON:0000073!1.15e-35!94;UBERON:0001016!1.15e-35!94;UBERON:0005743!7.39e-35!86;UBERON:0002616!3.32e-29!59;UBERON:0000955!1.96e-28!69;UBERON:0006238!1.96e-28!69;UBERON:0002020!5.92e-26!34;UBERON:0003528!5.92e-26!34;UBERON:0002780!6.42e-24!41;UBERON:0001890!6.42e-24!41;UBERON:0006240!6.42e-24!41;UBERON:0003080!2.95e-23!42;UBERON:0001893!9.01e-23!34;UBERON:0002346!1.04e-22!90;UBERON:0003075!5.39e-22!86;UBERON:0007284!5.39e-22!86;UBERON:0001869!2.52e-21!32;UBERON:0002791!1.56e-20!33;UBERON:0001950!1.12e-18!20;UBERON:0000924!1.84e-18!173;UBERON:0006601!1.84e-18!173;UBERON:0004121!1.04e-17!169;UBERON:0002619!7.53e-17!22;UBERON:0007023!2.38e-16!115;UBERON:0002298!6.08e-16!8;UBERON:0003056!9.18e-15!61;UBERON:0000956!1.23e-14!25;UBERON:0000203!1.23e-14!25;UBERON:0000033!1.28e-14!123;UBERON:0003076!1.52e-14!15;UBERON:0003057!1.52e-14!15;UBERON:0002308!3.05e-14!9;UBERON:0000125!3.05e-14!9;UBERON:0000153!1.20e-13!129;UBERON:0007811!1.20e-13!129;UBERON:0002771!4.16e-12!3;UBERON:0000988!5.40e-12!3;UBERON:0006331!1.31e-11!3;UBERON:0001871!2.98e-11!7;UBERON:0004733!1.60e-10!12;UBERON:0002028!1.60e-10!12;UBERON:0007277!1.60e-10!12;UBERON:0000200!2.69e-10!6;UBERON:0002420!5.98e-10!9;UBERON:0007245!5.98e-10!9;UBERON:0010009!5.98e-10!9;UBERON:0010011!5.98e-10!9;UBERON:0000454!5.98e-10!9;UBERON:0004732!1.17e-09!13;UBERON:0001905!4.78e-09!2;UBERON:0002757!4.78e-09!2;UBERON:0010134!4.78e-09!2;UBERON:0002784!4.78e-09!2;UBERON:0005408!4.78e-09!2;UBERON:0001899!4.78e-09!2;UBERON:0009663!1.37e-08!7;UBERON:0002148!2.01e-08!2;UBERON:0009662!2.01e-08!2;UBERON:0001872!2.12e-07!5;UBERON:0000025!3.60e-07!194;UBERON:0002680!7.41e-07!9;UBERON:0001895!7.41e-07!9;UBERON:0010092!7.41e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5!UBERON:0001872;3.10e-09;5!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.66e-21,2;UBERON:0002757,4.66e-21,2;UBERON:0010134,4.66e-21,2;UBERON:0005408,4.66e-21,2;UBERON:0001899,4.66e-21,2;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0002784,3.10e-11,4;UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0001872,3.49e-09,5;UBERON:0001016,1.48e-07,89;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7 | |||
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| ||
|short_description=p19@NEFM | |||
}} | }} |
Latest revision as of 15:41, 17 September 2015
Short description: | p19@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_NEFM_5end |
Coexpression cluster: | NA |
Association with transcript: | -301bp_to_AF181990_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | Q9UK51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.66e-21 | 2 |
regional part of epithalamus | 4.66e-21 | 2 |
secretory circumventricular organ | 4.66e-21 | 2 |
circumventricular organ | 4.66e-21 | 2 |
epithalamus | 4.66e-21 | 2 |
gland of diencephalon | 3.10e-11 | 4 |
neuroendocrine gland | 3.10e-11 | 4 |
regional part of diencephalon | 3.10e-11 | 4 |
sympathetic nervous system | 2.53e-09 | 5 |
autonomic nervous system | 2.53e-09 | 5 |
parietal lobe | 3.49e-09 | 5 |
nervous system | 1.48e-07 | 89 |
diencephalon | 5.70e-07 | 7 |
future diencephalon | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.42e-11 | 4 |
neuroendocrine tumor | 5.54e-08 | 6 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |