FFCP PHASE1:Hg19::chr9:137591918..137591938,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:137591918..137591938,+ to FFCP PHASE1:Hg19::chr9:137591918..137591938,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:137591918..137591938,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137591918..137591938,+ | |||
|id=chr9:137591918..137591938,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.89e-30!180;CL:0000057!2.34e-21!75;CL:0000680!1.41e-09!57;CL:0000056!1.41e-09!57;CL:0000355!1.41e-09!57;CL:0000222!2.79e-09!119;CL:0000183!3.33e-09!59;CL:0000187!9.88e-09!54;CL:0002334!2.16e-08!12;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42;CL:0000144!4.39e-07!625;CL:0000393!8.67e-07!60;CL:0000211!8.67e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.81e-15;19!CL:0000134;4.12e-13;55!CL:0000048;1.72e-11;58!CL:0000723;4.00e-11;61!CL:0002334;1.83e-09;12!CL:0000057;1.97e-08;73!CL:0002320;3.51e-08;188!CL:0000034;5.91e-08;69!CL:0002620;7.54e-07;23!CL:0000499;9.27e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.28e-23,76;CL:0000349,5.46e-15,19;CL:0000048,3.84e-14,427;CL:0000723,2.53e-13,433;CL:0000034,1.29e-12,441;CL:0002334,1.69e-09,12;CL:0002320,1.75e-08,361;CL:0000134,1.87e-08,354;CL:0000680,2.22e-08,58;CL:0000056,2.22e-08,58;CL:0000355,2.22e-08,58;CL:0000219,1.24e-07,386;CL:0000187,2.11e-07,55;CL:0002620,7.50e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.36e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.78e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.15e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.31e-09!61;UBERON:0002036!1.31e-09!61;UBERON:0003082!1.31e-09!61;UBERON:0000478!1.43e-09!24;UBERON:0004872!1.66e-09!84;UBERON:0002385!2.60e-09!63;UBERON:0001015!2.60e-09!63;UBERON:0000383!2.60e-09!63;UBERON:0000914!2.85e-09!83;UBERON:0002329!2.85e-09!83;UBERON:0003077!2.85e-09!83;UBERON:0003059!2.85e-09!83;UBERON:0007282!2.85e-09!83;UBERON:0009618!2.85e-09!83;UBERON:0007285!2.85e-09!83;UBERON:0004290!8.81e-09!70;UBERON:0005631!1.13e-08!14;UBERON:0000158!1.13e-08!14;UBERON:0002049!9.98e-08!79;UBERON:0007798!9.98e-08!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.79e-12;24!UBERON:0005631;1.19e-08;10!UBERON:0000158;1.19e-08;10!UBERON:0002384;1.34e-07;198!UBERON:0004457;3.28e-07;9!UBERON:0000042;3.28e-07;9!UBERON:0003688;4.05e-07;6!UBERON:0002358;4.05e-07;6!UBERON:0003684;4.05e-07;6!UBERON:0001178;4.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.36e-12,24;UBERON:0005631,6.05e-10,14;UBERON:0000158,6.05e-10,14;UBERON:0001134,8.61e-09,62;UBERON:0002036,8.61e-09,62;UBERON:0003082,8.61e-09,62;UBERON:0002384,1.61e-08,371;UBERON:0002385,3.42e-08,64;UBERON:0001015,3.42e-08,64;UBERON:0000383,3.42e-08,64;UBERON:0007503,6.01e-08,78;UBERON:0007524,8.64e-08,73;UBERON:0002329,1.39e-07,71;UBERON:0003059,1.39e-07,71;UBERON:0007282,1.39e-07,71;UBERON:0004290,1.39e-07,71;UBERON:0009618,1.39e-07,71;UBERON:0003077,2.46e-07,72;UBERON:0007285,2.46e-07,72;UBERON:0003688,4.55e-07,6;UBERON:0002358,4.55e-07,6;UBERON:0003684,4.55e-07,6;UBERON:0001178,4.55e-07,6;UBERON:0004872,7.36e-07,83 | |||
|phase1_expression=5.63202975738726,19.9113487218614,12.1220787522535,9.00659685178174,13.4088328328186,23.55314015071,7.59899634504932,0,0.522371256399677,0,2.09340350391728,3.71350332621293,5.80287352102598,0.247532705920093,0.994192127183747,6.05092631806598,4.82155622419182,2.19093027116212,0.975865597581014,0.738726348460727,6.5280221198161,4.38836610069323,0.572471974262113,1.09499540058307,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,1.40648818027883,3.2529523714611,3.50936537445123,3.18662341713812,3.1811437882044,17.0322204605923,0.378139268656271,1.77383517970051,2.28370442802128,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,3.35599548967925,2.75118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,9.72170337458112,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,14.4121865991642,4.05217637326655,1.98613771219828,38.1492705595922,2.4826786753885,7.28880880184999,6.4049397437823,12.0867098724408,1.55605517699883,4.58016285036939,2.61539044981534,5.2975099675726,3.45705554687999,0.234321431833797,0,0,0.298897361103602,0.704606991862589,0,0.140450806702248,0.204154171254893,0.61417158655884,1.85986406116378,4.75201142912821,6.67620709052104,2.73048408581408,8.62341770179486,0.168336113954066,1.00094815897571,0,3.95079858792754,5.21029252858333,2.85452311922534,1.47461838108027,16.862625754753,4.27114777637135,2.11931901159562,11.1033705551229,6.59536187126009,11.0785432219621,6.32797311527405,11.1392379279236,16.661727882565,10.0973509697646,4.60249493211497,15.8413135682436,23.4306331060965,6.2466300901137,1.86516651541536,0,0,0,0,0.132529768321485,1.16193942869518,0.310983165046111,0,0.36497735907583,1.56449532329816,8.36213219650751,0,1.85747171212792,2.88751792667834,1.30137480043828,2.86593973132773,0.482022059766964,1.43382164552112,1.52515610864684,0.71181185733329,1.34831308160164,0.98110732562673,0.38474715694639,0.738155454624648,8.41450642820675,2.057870056657,10.2906097969879,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,0,0,0.115930404975077,1.17408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,1.17587489739202,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0.300343057843917,0,0.784917590417525,1.30788020649984,1.0267360014933,8.91974838728667,0,3.381211010224,2.92531928243358,3.12022310734098,0.514414748524284,0,0.266422179016099,5.14720777169331,29.3015666911379,4.11620168390384,0,6.04166312862328,1.58390374586686,0.301439377059586,1.74306691720059,2.49932477955143,0,0,0,2.39624855491583,6.89171615004683,0,2.31650090668127,3.28762116080613,1.25342674267927,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.858840442033979,0,0.542530047399471,12.4782516918484,22.6604815772395,12.143085957613,6.2084949946138,3.00946099727719,13.6444502433591,0,1.99267679560631,2.21243002250044,0.868836144680828,2.93701736194111,12.3531632571908,0,0,0,3.33440328590885,6.65741758041988,17.5386370131215,16.3751153160393,15.9600452219585,34.8018517097011,17.1706460002639,8.18731598506726,10.4555048743345,10.3892646511494,3.70103265126373,7.28003073783821,0.9033987161519,2.59627214591811,5.22946703069817,0,0.601519410909855,0,3.09999010044438,3.09554985611419,1.57349297951309,0,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,0,1.72732732881711,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,3.38807019827871,0.742585499285292,0.574265537996172,1.95018073810956,0,0.193341436584244,1.23238893691716,1.68854042198743,1.10269257987624,1.93356440762893,3.48040065394148,0.511359764496605,1.95870478422822,0.330569830721956,0.192190067365106,0.893288987462089,0.6069466851333,3.253918845081,39.9811680474913,0,1.54016790088044,0,0,1.11194531462352,1.00187420719394,1.116475108079,1.89827654831236,2.47819252100972,0.767693373934002,0,0.95460974377781,1.56989728039846,1.07923474549989,5.21620356498504,2.35624804691373,0.202182481573316,0,1.68503382495592,0,1.94970791705028,1.05650146756755,1.77449884830381,13.7163268995101,3.39024349860728,0,3.3171948762061,2.19225442626881,0.578775534266688,1.9676842561399,0.811641507850816,2.78841148289775,3.09865162785466,1.72093622644862,5.1089501326823,0.35667105148125,0.354761064070598,5.06658324714394,4.61012850143863,0.379473173765715,2.44954304171488,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,7.40107902686839,6.83018765915069,9.21482106297696,0,0.140669416410513,0.111308705022906,0,0,0.996239941255349,0.552567831062295,0,1.43176155503017,0,4.0435146396035,0,0,0,0.394573622547734,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0.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| ||
|short_description=p@chr9:137591918..137591938,+ | |||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137591918..137591938, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137591918..137591938, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.28e-23 | 76 |
extraembryonic cell | 5.46e-15 | 19 |
multi fate stem cell | 3.84e-14 | 427 |
somatic stem cell | 2.53e-13 | 433 |
stem cell | 1.29e-12 | 441 |
preadipocyte | 1.69e-09 | 12 |
connective tissue cell | 1.75e-08 | 361 |
mesenchymal cell | 1.87e-08 | 354 |
muscle precursor cell | 2.22e-08 | 58 |
myoblast | 2.22e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.22e-08 | 58 |
motile cell | 1.24e-07 | 386 |
muscle cell | 2.11e-07 | 55 |
skin fibroblast | 7.50e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.36e-12 | 24 |
extraembryonic membrane | 6.05e-10 | 14 |
membranous layer | 6.05e-10 | 14 |
skeletal muscle tissue | 8.61e-09 | 62 |
striated muscle tissue | 8.61e-09 | 62 |
myotome | 8.61e-09 | 62 |
connective tissue | 1.61e-08 | 371 |
muscle tissue | 3.42e-08 | 64 |
musculature | 3.42e-08 | 64 |
musculature of body | 3.42e-08 | 64 |
epithelial vesicle | 6.01e-08 | 78 |
dense mesenchyme tissue | 8.64e-08 | 73 |
somite | 1.39e-07 | 71 |
presomitic mesoderm | 1.39e-07 | 71 |
presumptive segmental plate | 1.39e-07 | 71 |
dermomyotome | 1.39e-07 | 71 |
trunk paraxial mesoderm | 1.39e-07 | 71 |
paraxial mesoderm | 2.46e-07 | 72 |
presumptive paraxial mesoderm | 2.46e-07 | 72 |
omentum | 4.55e-07 | 6 |
peritoneum | 4.55e-07 | 6 |
abdominal cavity | 4.55e-07 | 6 |
visceral peritoneum | 4.55e-07 | 6 |
splanchnic layer of lateral plate mesoderm | 7.36e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.15e-09 | 14 |