FFCP PHASE1:Hg19::chr9:88715044..88715071,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:88715044..88715071,- to FFCP PHASE1:Hg19::chr9:88715044..88715071,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51280 | |EntrezGene=51280 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15451 | |HGNC=15451 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBJ4,C9J941 | |UniProt=Q8NBJ4,C9J941 | ||
|association_with_transcript=0bp_to_ENST00000388711,ENST00000466178_5end | |||
|cluster_id=chr9:88715044..88715071,- | |||
|description=CAGE_peak_3_at_GOLM1_5end | |||
|id=chr9:88715044..88715071,- | |||
|ontology_enrichment_celltype=CL:0000055!1.91e-08!180;CL:0000057!9.86e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.57e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.56e-12!448;UBERON:0004120!4.56e-12!448;UBERON:0006603!4.56e-12!448;UBERON:0000468!6.86e-12!659;UBERON:0005409!4.76e-09!35;UBERON:0000467!1.45e-08!625;UBERON:0000480!1.52e-08!626;UBERON:0000160!2.05e-08!27;UBERON:0000922!3.53e-08!612;UBERON:0002100!4.20e-08!216;UBERON:0003886!1.24e-07!63;UBERON:0000062!2.05e-07!511;UBERON:0003104!2.41e-07!238;UBERON:0009142!2.41e-07!238;UBERON:0004458!3.01e-07!49;UBERON:0002050!3.30e-07!605;UBERON:0005423!3.30e-07!605;UBERON:0002553!4.38e-07!70;UBERON:0000923!4.75e-07!604;UBERON:0005291!4.75e-07!604;UBERON:0006598!4.75e-07!604;UBERON:0002532!4.75e-07!604;UBERON:0000464!5.37e-07!104;UBERON:0002323!8.33e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.78e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004458,1.82e-07,49;UBERON:0002100,2.65e-07,199;UBERON:0005409,4.32e-07,25;UBERON:0002323,4.35e-07,46;UBERON:0003886,5.47e-07,54 | |||
|phase1_expression=5.08699461957559,1.92690471501885,5.77913056793482,10.007329835313,1.34088328328186,3.48935409640147,2.53299878168311,1.26343974685366,2.61185628199839,1.96587149201207,2.79120467188971,4.58726881473362,4.22027165165526,4.57935505952172,5.63375538737457,4.70627602516243,3.01347264011988,5.11217063271161,3.41552959153355,0.492484232307152,0.204000691244253,0.626909442956176,1.14494394852423,1.09499540058307,3.01302335027527,0,0,0,0,1.91914699048606,0.154816123316076,0.919421224478927,1.204823675113,0.739508020333575,0,0,0.293600439334847,0.553995408531877,2.20598892217156,1.95309783644267,0,0.647787332037959,0.257575567634187,0.726991193897824,0.755751887377619,0.970336244751265,0.697287110717054,0.822335776043652,1.54853185447552,3.45230870786581,3.58624989140741,1.6553756092201,1.37898272294647,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,0.898893937780338,0.918251677112708,0.962787081228281,0.639337125799041,2.96866170168044,2.19410023383795,0.852449501065388,0.580418477257168,2.8369261234557,0.622822248995575,1.25624332628372,0,2.38907729175628,8.47559303686716,1.47311054395026,2.53169909952708,1.69004229049553,1.27562579979026,0.209658645508376,1.79725809834392,1.35159203557356,1.28580469357664,1.42506371870624,1.19350006319454,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0.451725357233318,0.383959833463255,0,0.947109008176067,0,1.20964045934839,1.87208137048455,1.30341963494519,0,6.03630773733273,5.24236503558474,20.6020316859203,4.51204119572301,23.3202895526926,24.6538643585841,21.8985691636186,1.51255707462509,1.10864698731282,1.84453049955565,1.96468613246569,0,0.370784442784429,0.324547393654683,0,0.531831842075461,0,0,0,0.79504962946682,3.4409383804245,3.47140501607594,1.69592382577203,1.67799774483962,4.40188867104108,1.67195973229448,5.16833518338658,3.5576626268671,1.33888245105868,0.805658634218294,0,1.70843440283719,6.98559852657151,2.43042584364528,6.69747962130598,3.14341121676638,4.50445921933289,3.06633274931766,0.949265659568129,1.64881569537367,0,0,0.872188104285069,3.47880366186723,2.02608818663328,2.25095607382472,12.6208113129478,7.09336764396714,5.04609840128076,5.33744978648525,0.74000264525148,4.97937656639626,3.90660949002095,8.3365570587864,2.8757911252537,4.60940739583999,1.40592859100278,1.24864030732128,3.4228309292667,0.747243402759005,5.16711794032565,5.34180716414834,6.03938468819669,1.63323337003915,3.4393608847295,1.75653827998801,4.75201142912821,1.97813543422845,0,0,1.85169725349473,3.87867411603089,2.77064115484183,8.77955241761676,6.43624371177941,3.45547535485173,5.44474479168101,13.9923915837312,2.98980344345994,2.96704661623387,9.30282397861647,5.15262646192194,3.60696756063881,5.21127197728451,11.3080142601648,7.1129013767675,8.07788077581166,3.58994604704967,3.23292113637624,10.2952781829818,8.2616720546665,3.22165125389926,1.93260853163297,2.72746120590835,1.72082757233402,2.80539524098069,3.18071443971565,3.02104251460748,3.93912009058408,3.78481276313443,0.72995471815166,0,7.07565032012174,1.38134921352481,1.85747171212792,2.16563844500876,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,2.95262181849859,4.20725321410337,2.057870056657,0,0,0.982827216677626,0,0,5.78045661152634,1.54411029268673,2.63400684980701,0,0.904760751704678,0.925884451585296,0.651616610620649,2.07986957055916,0,1.39116485970092,2.11335649624479,0.866198686566443,1.38895653772983,0.951270761172991,0,0,0.246217006087397,0.234004265139238,0.445893486866185,1.87467667973554,6.55130299975552,3.40260233381728,0.716468181622786,0.871901815541886,0.383382679165211,18.2285398021499,0.880484340132261,3.31724984865235,2.16179930125442,5.30218220390796,5.01633364908135,1.14596527667483,1.17217447210047,0,6.68378702571603,6.60754727256618,9.1464458441785,6.05507855464948,3.92364061949952,14.3743040209062,3.23179289394444,7.15312891703765,2.535908257668,1.86156681609409,6.24044621468197,2.57207374262142,2.83698264046557,3.72991050622539,2.57360388584666,0.542621605391443,2.46972101034231,2.93162565864362,3.19852753868291,3.95975936466715,2.71295439353627,1.74306691720059,6.69819040919782,0,0,0,4.0736225433569,5.7430967917057,2.85273810081437,3.61953266668948,3.49309748335652,6.08807275015645,1.12085143993527,3.94061520403854,6.90008239550455,2.69520376187472,9.14740647200868,2.60279707715243,0.773288812777695,2.51274398001523,3.82763250991898,0,0,0,8.34302143690151,4.50153468953709,7.05289061619313,2.28767947683888,3.03329280955175,1.89242898040722,1.63997980989798,4.51419149591578,4.5481500811197,1.03473071292505,4.64957918974806,4.05612170791747,2.08520674723399,1.56640925970192,1.71571711905428,0.413536052245775,1.50999940573032,0.320182673410333,5.45629628603267,14.9791895559447,6.65258645325297,5.21026396419431,2.76231551918512,5.89386198309454,7.04765320906355,4.60536524160033,3.69964018630297,1.48418066444991,3.70103265126373,2.1307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| ||
|short_description=p3@GOLM1 | |||
}} | }} |
Latest revision as of 02:28, 18 September 2015
Short description: | p3@GOLM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GOLM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000388711, ENST00000466178_5end |
EntrezGene: | GOLM1 |
HGNC: | 15451 |
UniProt: | Q8NBJ4C9J941 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.57e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
body cavity or lining | 1.82e-07 | 49 |
trunk | 2.65e-07 | 199 |
gastrointestinal system | 4.32e-07 | 25 |
body cavity | 4.35e-07 | 46 |
body cavity precursor | 5.47e-07 | 54 |