FFCP PHASE1:Hg19::chrX:107288164..107288174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=340547 | |EntrezGene=340547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28675 | |HGNC=28675 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4P2,Q86XK7 | |UniProt=C9J4P2,Q86XK7 | ||
|association_with_transcript=-25bp_to_ENST00000415430,NM_001170553,NM_182607,uc004eno.2,uc011msk.1_5end | |||
|cluster_id=chrX:107288164..107288174,+ | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_6_at_VSIG1_5end | |||
|id=chrX:107288164..107288174,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.99e-30;1!UBERON:0009117;2.74e-12;10!UBERON:0005564;2.74e-12;10!UBERON:0004161;2.36e-11;11!UBERON:0009497;9.30e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001255!2.87e-08!2;UBERON:0001556!2.87e-08!2;UBERON:0003127!3.08e-08!2;UBERON:0000473!3.63e-08!8;UBERON:0000945!3.63e-08!8;UBERON:0010039!3.63e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.28e-23;5!UBERON:0010039;1.28e-23;5!UBERON:0000473;4.22e-15;8!UBERON:0003135;2.90e-11;11!UBERON:0002110;7.42e-11;3!UBERON:0001041;4.21e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.79e-15,8;UBERON:0000945,3.79e-15,8;UBERON:0010039,3.79e-15,8;UBERON:0003135,2.68e-11,11;UBERON:0002110,7.42e-11,3;UBERON:0006242,7.42e-11,3 | |||
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|short_description=p6@VSIG1 | |||
}} | }} |
Latest revision as of 23:10, 18 September 2015
Short description: | p6@VSIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VSIG1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | -25bp_to_ENST00000415430, NM_001170553, NM_182607, uc004eno.2, uc011msk.1_5end |
EntrezGene: | VSIG1 |
HGNC: | 28675 |
UniProt: | C9J4P2Q86XK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.79e-15 | 8 |
stomach | 3.79e-15 | 8 |
food storage organ | 3.79e-15 | 8 |
male reproductive organ | 2.68e-11 | 11 |
gallbladder | 7.42e-11 | 3 |
gall bladder primordium | 7.42e-11 | 3 |