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FFCP PHASE1:Mm9::chr12:76409403..76409421,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:76409403..76409421,+
|DHSsupport=NA
|short_description=p1@Rhoj
|DPIdataset=NA
|description=CAGE_peak_1_at_Rhoj_5end
|association_with_transcript=94bp_to_ENSMUST00000055390,ENSMUST00000118602,ENSMUST00000118966_5end
|EntrezGene=80837
|EntrezGene=80837
|HGNC=
|HGNC=
|MCL_coexpression_id=2043
|TSSclassifier=NA
|UniProt=Q9ER71,D3YX61,F2Z463
|UniProt=Q9ER71,D3YX61,F2Z463
|association_with_transcript=94bp_to_ENSMUST00000055390,ENSMUST00000118602,ENSMUST00000118966_5end
|cluster_id=chr12:76409403..76409421,+
|description=CAGE_peak_1_at_Rhoj_5end
|id=chr12:76409403..76409421,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!3.78e-10!23;UBERON:0001009!3.78e-10!23;UBERON:0004872!2.30e-09!33;UBERON:0007100!2.50e-09!18;UBERON:0000948!2.50e-09!18;UBERON:0005498!2.50e-09!18;UBERON:0004140!2.50e-09!18;UBERON:0009881!2.50e-09!18;UBERON:0004141!2.50e-09!18;UBERON:0003084!2.50e-09!18;UBERON:0007005!2.50e-09!18;UBERON:0004139!2.50e-09!18;UBERON:0004291!2.50e-09!18;UBERON:0005153!1.08e-07!17;UBERON:0000468!2.20e-07!333;UBERON:0002048!4.57e-07!14;UBERON:0000117!4.57e-07!14;UBERON:0000171!4.57e-07!14;UBERON:0000170!4.57e-07!14;UBERON:0005597!4.57e-07!14;UBERON:0000118!4.57e-07!14;UBERON:0000926!4.80e-07!193;UBERON:0004120!4.80e-07!193;UBERON:0006603!4.80e-07!193;UBERON:0001048!6.82e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.36e-10,23;UBERON:0001009,3.36e-10,23;UBERON:0004872,2.07e-09,33;UBERON:0007100,2.25e-09,18;UBERON:0000948,2.25e-09,18;UBERON:0005498,2.25e-09,18;UBERON:0004140,2.25e-09,18;UBERON:0009881,2.25e-09,18;UBERON:0004141,2.25e-09,18;UBERON:0003084,2.25e-09,18;UBERON:0007005,2.25e-09,18;UBERON:0004139,2.25e-09,18;UBERON:0004291,2.25e-09,18;UBERON:0005153,9.95e-08,17;UBERON:0002048,4.23e-07,14;UBERON:0000117,4.23e-07,14;UBERON:0000171,4.23e-07,14;UBERON:0000170,4.23e-07,14;UBERON:0005597,4.23e-07,14;UBERON:0000118,4.23e-07,14
|phase1_expression=32.5102159622732,0.697950815278722,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,12.6714502325094,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4494358919729,11.2528393653661,6.60768307782054,16.4302182313088,2.61630187656536,16.6961498878199,6.80504646759992,3.21968769738334,1.43752564364972,0,0,0,147.92417572067,56.1605542279963,40.2224231976405,3.43937983461316,2.11596391708813,2.53532561402472,15.2480039431109,7.11435836888911,5.39939830368839,2.96659908770092,1.4209602298922,7.78960287347852,4.99483796918021,4.56234294157302,2.29510095163874,4.41682418837902,4.57041575046086,5.07997644188711,1.22490799214954,2.39613677545591,0,1.10115880999389,0.893811366596314,0.153606533256243,2.90149833006426,2.47016637726506,5.2091337055676,1.11673199600552,2.25105044012672,1.37518422999129,2.65165726926301,3.84403538157578,2.42319279572891,5.37655972665607,6.95258352982427,64.0600520030708,11.185510400758,0,0,0,0,5.47733238513832,14.827438064291,9.61208217030615,9.18682893726885,3.38024207464033,7.69958864485907,2.54805239706646,7.11066703153331,0,0,0,4.11061966988616,9.58070169494535,6.82833839698194,12.1439728736295,6.39377504455497,8.76338889573022,10.2491395575783,11.6412820064348,10.3046604890334,11.3709685157812,25.5940861748244,8.84610551949874,25.8826959915855,11.0420759230197,7.27312879702833,1.86391761218122,2.63502717310392,2.09446706813455,4.85368404896324,0.11981512450592,0,0,1.79748767285787,0.457500602818626,2.38743269014442,2.9550134432687,1.27857728665165,1.87009240103604,1.29793010454206,28.5150218780886,12.067476149179,3.79084137650512,7.78634866779954,6.50602214813519,8.73627996847197,7.92273371143537,13.7141384230501,18.5739642683125,16.9110110776002,20.2395725049014,11.3829483125167,5.82033580918674,7.94245536704841,10.9089696981648,16.6588756644957,18.9072129473407,17.0643561595862,19.1377386859387,14.131432944113,0,0,0,11.5990432619881,11.0227248191115,13.1445304866541,13.494449928357,18.8893662477508,14.6553757243009,13.4869687955237,19.8522317035718,20.667465598989,24.0257380873681,27.580133965288,33.3192807233467,33.6259971078264,28.9806152184187,41.7381962344756,2.3131894342054,4.01327988279209,0,2.90895623329899,7.03851226766272,6.50262681209228,7.60318021800351,8.47070803418039,9.33987784148455,8.75037880117772,9.96511029243474,7.74085087202851,6.53471542880701,12.1363447945102,13.062593836981,8.08937467788799,11.4553166433588,8.56307474993779,9.86273084956025,10.3966146474853,4.50830942692322,9.36796108088446,14.5464365375719,13.3258057791605,18.3385957660346,9.00421902675573,9.73392112616524,9.37818445805684,1.1858105083486,2.50267658574141,3.73462090715086,2.69834534861824,4.46292267054706,4.58236603529592,2.5462585178142,4.31544206176216,2.59416362840057,4.3929826110093,1.43768206527355,4.46569137202204,6.86482880852033,4.2938409251009,5.74071723270119,4.3419916922703,33.2555742299888,8.14813070613084,11.8964432802679,10.0149600607361,14.0814148973101,13.9030193676707,21.6619713206272,45.2710063030093,22.8570958953977,31.8909153094236,46.0824281420138,33.2642528872948,42.1351355752785,52.9415554408332,1.50791283939272,0.54390568381871,31.4729134732183,25.1102439137307,2.56880943980467,3.7507739709505,11.639381121744,27.5193310652767,2.83957397474631,3.51394869866975,4.73931475012158,2.15071918157297,4.23317480756549,3.67999490025482,2.02405350837447,2.33804686329049,1.18586333383957,1.92792789853084,15.329529202493,29.0246933977626,23.455722146915,32.8290544715346,5.30980553359851,4.85561272309963,8.16273603804828,8.48722858901541,14.1744908582771,9.53048958626175,21.4495483329624,17.0860852854428,21.3898427030833,11.6933600436252,10.5418608574999,9.28219889233682,4.42571487479924,11.3438489239725,15.5230420539305,15.4322665222746,10.4630737848941,13.5560301377574,12.8348236069654,9.74287837166718,22.0591405579888,11.0152676849186,5.07215315526412,8.90385765883992,15.9849782428946,14.0529115082603,10.6241386162791,9.84845398470368,6.99554007911642,2.22510362412612,2.39219233116994,13.6215332855727,8.33375373163703,4.1441060541032,3.2806614653046,2.97411625168479,0,0,0,16.2294005062569,8.54107182669065,11.7925290933572,13.2846569210816,14.2180041289839,15.0670168984863,14.5653494095606,19.5062155511793,18.5846718808661,10.3691978633434,9.32008969630389,0.56369293868419,7.027277664067,8.93475848468327,16.9172533859321,15.6283386408055,14.3612706667161,12.3225100578042,11.0673727117358,4.40409246587986,1.93267296660805,3.45636007509439,0.632022241256357,10.7444364103787,7.9087437016917,3.76770386635606,3.22248052201467,2.78153896693771,1.68273629327956,1.47689527174577,2.42319479875554,0.990688486514998,0.705783295957884,1.26695244961678,0.769694733122636,1.05189211963412,9.06921534460846,0,0,0,40.56981474676,39.4133198447482,31.3189277497023,12.6477343656649,7.52358156053045,0.564751842617067,1.38097570952153,0.572895513439397,2.749650917499,0,0,0,0.900642406448441,0.906284817968409,0,5.70830411712972,3.99024873401031,9.04888110496911,11.1829089851415,7.33646069197938,10.1113929647508,5.778414922842,7.41726206060019,8.66481865897901,8.59170519996911,7.85785829659743,10.9403278003924,13.4843770756631,12.741005328569,14.5886091147258,10.9547548995107,11.8202012463753,12.3461901096771,11.9504911232959,8.39033844766065,9.25746981440622,8.16388708332953,12.1602456873134,8.86613141457204,11.5754537910857,12.3537327521848,11.1586063452391,7.10288220882176,13.3088031568945,3.92799590160417,12.4566769030383,12.5100692616966,9.82154503607254,16.4233051657124,12.1531164918119,12.9901500527732,14.0358965067245,12.0327790267047,14.3466249051633,15.6619907574856,19.7087660277358
|phase1_expression=32.5102159622732,0.697950815278722,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,12.6714502325094,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4494358919729,11.2528393653661,6.60768307782054,16.4302182313088,2.61630187656536,16.6961498878199,6.80504646759992,3.21968769738334,1.43752564364972,0,0,0,147.92417572067,56.1605542279963,40.2224231976405,3.43937983461316,2.11596391708813,2.53532561402472,15.2480039431109,7.11435836888911,5.39939830368839,2.96659908770092,1.4209602298922,7.78960287347852,4.99483796918021,4.56234294157302,2.29510095163874,4.41682418837902,4.57041575046086,5.07997644188711,1.22490799214954,2.39613677545591,0,1.10115880999389,0.893811366596314,0.153606533256243,2.90149833006426,2.47016637726506,5.2091337055676,1.11673199600552,2.25105044012672,1.37518422999129,2.65165726926301,3.84403538157578,2.42319279572891,5.37655972665607,6.95258352982427,64.0600520030708,11.185510400758,0,0,0,0,5.47733238513832,14.827438064291,9.61208217030615,9.18682893726885,3.38024207464033,7.69958864485907,2.54805239706646,7.11066703153331,0,0,0,4.11061966988616,9.58070169494535,6.82833839698194,12.1439728736295,6.39377504455497,8.76338889573022,10.2491395575783,11.6412820064348,10.3046604890334,11.3709685157812,25.5940861748244,8.84610551949874,25.8826959915855,11.0420759230197,7.27312879702833,1.86391761218122,2.63502717310392,2.09446706813455,4.85368404896324,0.11981512450592,0,0,1.79748767285787,0.457500602818626,2.38743269014442,2.9550134432687,1.27857728665165,1.87009240103604,1.29793010454206,28.5150218780886,12.067476149179,3.79084137650512,7.78634866779954,6.50602214813519,8.73627996847197,7.92273371143537,13.7141384230501,18.5739642683125,16.9110110776002,20.2395725049014,11.3829483125167,5.82033580918674,7.94245536704841,10.9089696981648,16.6588756644957,18.9072129473407,17.0643561595862,19.1377386859387,14.131432944113,0,0,0,11.5990432619881,11.0227248191115,13.1445304866541,13.494449928357,18.8893662477508,14.6553757243009,13.4869687955237,19.8522317035718,20.667465598989,24.0257380873681,27.580133965288,33.3192807233467,33.6259971078264,28.9806152184187,41.7381962344756,2.3131894342054,4.01327988279209,0,2.90895623329899,7.03851226766272,6.50262681209228,7.60318021800351,8.47070803418039,9.33987784148455,8.75037880117772,9.96511029243474,7.74085087202851,6.53471542880701,12.1363447945102,13.062593836981,8.08937467788799,11.4553166433588,8.56307474993779,9.86273084956025,10.3966146474853,4.50830942692322,9.36796108088446,14.5464365375719,13.3258057791605,18.3385957660346,9.00421902675573,9.73392112616524,9.37818445805684,1.1858105083486,2.50267658574141,3.73462090715086,2.69834534861824,4.46292267054706,4.58236603529592,2.5462585178142,4.31544206176216,2.59416362840057,4.3929826110093,1.43768206527355,4.46569137202204,6.86482880852033,4.2938409251009,5.74071723270119,4.3419916922703,33.2555742299888,8.14813070613084,11.8964432802679,10.0149600607361,14.0814148973101,13.9030193676707,21.6619713206272,45.2710063030093,22.8570958953977,31.8909153094236,46.0824281420138,33.2642528872948,42.1351355752785,52.9415554408332,1.50791283939272,0.54390568381871,31.4729134732183,25.1102439137307,2.56880943980467,3.7507739709505,11.639381121744,27.5193310652767,2.83957397474631,3.51394869866975,4.73931475012158,2.15071918157297,4.23317480756549,3.67999490025482,2.02405350837447,2.33804686329049,1.18586333383957,1.92792789853084,15.329529202493,29.0246933977626,23.455722146915,32.8290544715346,5.30980553359851,4.85561272309963,8.16273603804828,8.48722858901541,14.1744908582771,9.53048958626175,21.4495483329624,17.0860852854428,21.3898427030833,11.6933600436252,10.5418608574999,9.28219889233682,4.42571487479924,11.3438489239725,15.5230420539305,15.4322665222746,10.4630737848941,13.5560301377574,12.8348236069654,9.74287837166718,22.0591405579888,11.0152676849186,5.07215315526412,8.90385765883992,15.9849782428946,14.0529115082603,10.6241386162791,9.84845398470368,6.99554007911642,2.22510362412612,2.39219233116994,13.6215332855727,8.33375373163703,4.1441060541032,3.2806614653046,2.97411625168479,0,0,0,16.2294005062569,8.54107182669065,11.7925290933572,13.2846569210816,14.2180041289839,15.0670168984863,14.5653494095606,19.5062155511793,18.5846718808661,10.3691978633434,9.32008969630389,0.56369293868419,7.027277664067,8.93475848468327,16.9172533859321,15.6283386408055,14.3612706667161,12.3225100578042,11.0673727117358,4.40409246587986,1.93267296660805,3.45636007509439,0.632022241256357,10.7444364103787,7.9087437016917,3.76770386635606,3.22248052201467,2.78153896693771,1.68273629327956,1.47689527174577,2.42319479875554,0.990688486514998,0.705783295957884,1.26695244961678,0.769694733122636,1.05189211963412,9.06921534460846,0,0,0,40.56981474676,39.4133198447482,31.3189277497023,12.6477343656649,7.52358156053045,0.564751842617067,1.38097570952153,0.572895513439397,2.74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|short_description=p1@Rhoj
}}
}}

Latest revision as of 19:05, 26 September 2015

Short description:p1@Rhoj
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rhoj_5end
Coexpression cluster:MCL_coexpression_mm9:2043
Association with transcript: 94bp_to_ENSMUST00000055390, ENSMUST00000118602, ENSMUST00000118966_5end
EntrezGene:Rhoj
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rhoj

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.51
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.70
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1147.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E156.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C540.22
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.25
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F96.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G364.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C512.14
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F510.25
adrenal gland, neonate N00.CNhs11191.1311-23C111.64
adrenal gland, neonate N25.CNhs11223.1377-27I310.30
amnion, adult pregnant day17.5.CNhs10488.583-22A811.37
aorta, adult.CNhs10498.46-23H125.59
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F525.88
bone (os femoris), neonate N16.CNhs11225.1525-43A611.04
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.07
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C618.57
eyeball, neonate N01.CNhs11140.1532-43E716.91
eyeball, neonate N02.CNhs11205.1551-44G820.24
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E210.91
forelimb, embryo E14.CNhs10577.413-26A816.66
forelimb, embryo E15.CNhs11007.437-20E718.91
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B519.14
gonad, embryo E13.CNhs11044.1564-45I614.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E911.60
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D413.49
heart, embryo E15.CNhs11017.431-16C818.89
heart, embryo E16.CNhs11021.457-17C614.66
heart, embryo E17.CNhs11025.479-18E513.49
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E320.67
heart, neonate N03.CNhs11221.1349-25I224.03
heart, neonate N10.CNhs11118.749-24G127.58
heart, neonate N16.CNhs11209.782-15G133.32
heart, neonate N20.CNhs11127.821-26I633.63
heart, neonate N25.CNhs11196.1351-25D328.98
heart, neonate N30.CNhs11202.1390-42D241.74
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A513.06
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E311.46
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I99.86
kidney, embryo E15.CNhs10997.434-16F810.40
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C714.55
kidney, neonate N00.CNhs11214.646-21G713.33
kidney, neonate N10.CNhs11206.758-6D518.34
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H19.38
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B133.26
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F811.90
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A613.90
lung, embryo E18.CNhs10583.1287-20I621.66
lung, neonate N00.CNhs11224.640-42C645.27
lung, neonate N06.CNhs11212.683-20E522.86
lung, neonate N07.CNhs11111.715-19A331.89
lung, neonate N10.CNhs11219.750-23E646.08
lung, neonate N20.CNhs11109.822-18A433.26
lung, neonate N25.CNhs11119.1359-25C742.14
lung, neonate N30.CNhs11133.1394-42H252.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H225.11
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I715.33
ovary, embryo E18.CNhs11040.505-44H729.02
ovary, neonate N00.CNhs11217.1299-22I423.46
oviduct, adult pregnant day01.CNhs10500.988-6G632.83
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E58.49
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G921.45
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D821.39
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C715.52
pituitary gland, embryo E14.CNhs11037.398-44A515.43
pituitary gland, embryo E15.CNhs10592.427-16B910.46
pituitary gland, embryo E16.CNhs11036.449-43F613.56
pituitary gland, embryo E17.CNhs11039.1265-44F512.83
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I722.06
placenta, adult pregnant day17.CNhs10464.577-18G311.02
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G415.98
skin, neonate N03.CNhs11215.662-22H314.05
skin, neonate N06.CNhs11097.693-20I510.62
skin, neonate N10.CNhs11108.762-6C49.85
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C113.62
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G811.79
stomach, embryo E16.CNhs11022.459-17D413.28
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B814.57
stomach, neonate N07.CNhs11210.718-18A919.51
stomach, neonate N25.CNhs11104.1355-25E418.58
stomach, neonate N30.CNhs11134.1386-42I110.37
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F57.03
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G516.92
testis, embryo E17.CNhs11029.486-18I515.63
testis, embryo E18.CNhs11027.503-18G514.36
testis, neonate N00.CNhs11189.1300-22B712.32
testis, neonate N07.CNhs11222.726-26I411.07
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I410.74
thymus, embryo E15.CNhs11005.430-45I27.91
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B49.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E440.57
uterus, adult pregnant day19.CNhs10497.590-15F539.41
uterus, adult.CNhs10509.92-27E531.32
vagina, adult.CNhs10502.89-27D512.65
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.42
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D115.66
whole body, neonate N10.CNhs10518.761-6B419.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system3.36e-1023
circulatory system3.36e-1023
splanchnic layer of lateral plate mesoderm2.07e-0933
primary circulatory organ2.25e-0918
heart2.25e-0918
primitive heart tube2.25e-0918
primary heart field2.25e-0918
anterior lateral plate mesoderm2.25e-0918
heart tube2.25e-0918
heart primordium2.25e-0918
cardiac mesoderm2.25e-0918
cardiogenic plate2.25e-0918
heart rudiment2.25e-0918
epithelial bud9.95e-0817
lung4.23e-0714
respiratory tube4.23e-0714
respiration organ4.23e-0714
pair of lungs4.23e-0714
lung primordium4.23e-0714
lung bud4.23e-0714
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