FFCP PHASE1:Mm9::chr13:55701416..55701496,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:55701416..55701496,+ to FFCP PHASE1:Mm9::chr13:55701416..55701496,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=218271 | |EntrezGene=218271 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R087,D3Z065,Q3TAW1 | |UniProt=Q8R087,D3Z065,Q3TAW1 | ||
|association_with_transcript=0bp_to_ENSMUST00000064701,ENSMUST00000133176,ENSMUST00000142654,NM_146045,uc007qrt.1,uc007qru.1,uc011yzw.1_5end | |||
|cluster_id=chr13:55701416..55701496,+ | |||
|description=CAGE_peak_1_at_B4galt7_5end | |||
|id=chr13:55701416..55701496,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.99e-12!50;CL:0000034!5.67e-11!97;CL:0000723!1.02e-10!91;CL:0000048!1.02e-10!91;CL:0000144!1.02e-10!121;CL:0000012!1.02e-10!121;CL:0000548!6.36e-10!115;CL:0000004!6.36e-10!115;CL:0000255!6.36e-10!115;CL:0002319!6.77e-10!43;CL:0002371!2.29e-09!118;CL:0000221!3.62e-09!44;CL:0000133!3.62e-09!44;CL:0000393!1.14e-08!39;CL:0000211!1.14e-08!39;CL:0002321!8.86e-08!70;CL:0000220!8.86e-08!70;CL:0000540!2.89e-07!33;CL:0000047!2.89e-07!33;CL:0000031!2.89e-07!33;CL:0000404!2.89e-07!33;CL:0000117!3.59e-07!23;CL:0000337!3.59e-07!23;CL:0000219!5.18e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.67e-11,97;CL:0000723,1.02e-10,91;CL:0000048,1.02e-10,91;CL:0002319,6.77e-10,43;CL:0000221,3.62e-09,44;CL:0000133,3.62e-09,44;CL:0000393,1.14e-08,39;CL:0000211,1.14e-08,39;CL:0002321,8.86e-08,70;CL:0000540,2.89e-07,33;CL:0000047,2.89e-07,33;CL:0000031,2.89e-07,33;CL:0000404,2.89e-07,33;CL:0000117,3.59e-07,23;CL:0000337,3.59e-07,23;CL:0000219,5.18e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.11e-11!75;UBERON:0001016!4.11e-11!75;UBERON:0001017!2.54e-10!73;UBERON:0005743!2.54e-10!73;UBERON:0004121!1.00e-06!102;UBERON:0000924!1.00e-06!102;UBERON:0006601!1.00e-06!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.11e-11,75;UBERON:0001017,2.54e-10,73;UBERON:0004121,1.08e-07,95;UBERON:0000924,1.08e-07,95;UBERON:0006601,1.08e-07,95;UBERON:0000073,6.74e-07,54 | |||
|phase1_expression=10.4096750618116,5.58360652222978,14.1049764210756,12.7034968748869,13.5241847085514,7.55456723603504,8.1764424208434,23.6295681898085,19.42884365693,22.9383235795554,5.65019295144166,6.78063351460359,19.5168832121575,28.0619491764982,4.99664642723494,6.88415909125408,6.29605690315332,19.7163853348899,18.373334103169,20.3707032863054,12.246233781754,20.6525178497841,21.9407822876706,11.3594620183319,9.1763712426868,12.0588712464154,7.32295393470427,9.04979177280734,11.9714754257516,9.07308467135751,15.7428662565266,11.4305521222734,14.1464901144451,0,5.77703239502549,5.98444723290572,4.49172583777212,18.4153917524239,8.5946887897618,9.42342739152837,7.64700934440319,10.2456822743767,10.6812277666854,16.2406895188495,13.3817549209759,19.8230492334616,39.119567217402,13.9536100083486,16.2567775223509,13.026803237977,17.2183298599196,14.3752564364972,13.5903910906766,7.25362142011344,12.7715643674136,24.439646423415,17.4785398362642,15.9858348606007,27.3127222160457,20.6306481916093,24.0855933332348,23.3802727127701,20.4537803105562,68.3923785133863,70.2095117422552,63.943210345149,36.8508135937638,25.7426264565442,16.3829587447395,18.3608076131099,15.984697062705,13.9968982357864,17.0068776532742,17.7611658861683,13.9934387686625,12.8690630125403,22.0231761998777,15.3224805702225,17.2039317246993,22.0250100509424,21.5910838901687,17.1901412283731,17.0301629390842,16.8828783009504,16.8078072554491,19.1508580557884,15.233769845504,24.0455285114638,24.3838342532853,18.1371744256285,10.1452571045587,20.6501730475533,21.0791113449403,21.0484244738749,13.6453047664011,13.4408066129201,14.7466641138339,11.4188316127299,13.2490862347463,13.4269038313929,9.15482228548423,19.2489716121477,25.4805239706646,28.4426681261332,14.9378818297738,13.4280728701802,14.6602089054287,10.2765491747154,17.6077760880077,10.5393918736026,14.5727674483554,12.1786191324856,10.8389283710347,13.1128697280782,13.6402900277418,10.8073268543521,17.0564527736718,11.2787498397531,9.73071607144862,17.1472860944254,11.2629174414801,14.0613823409214,22.3670113461747,13.1751358655196,15.9179497178226,12.2619386500124,28.6358147569149,37.7938720525847,20.9665874670557,18.1246673679835,11.4375150704657,13.9476330845279,18.251553620189,16.8772201838018,15.584103341967,15.5751612545047,14.2575109390443,12.5651040316194,14.6579199891531,8.41767423545896,12.1012011955314,19.5416788768452,13.1445354757905,14.1662528765572,12.1104968489364,11.0177799444971,14.4300655821982,11.6416516832557,12.287375597172,11.7245769704048,14.7798944297717,19.070028721199,16.9608822027615,19.5021213252413,15.6394423670037,13.9323986772945,19.6619692447706,25.4774428043568,18.4706274607135,9.32065976409758,9.14651633926275,10.6236616261999,11.1270025725049,8.65762619688577,11.8785676923281,12.556833016522,14.4867636755794,10.7424114977796,12.341988743511,11.984224877774,10.9442892886905,10.8187990694746,14.9294078397914,10.468100663309,12.6173969138476,14.6124549578584,13.5471701023357,10.8424732332053,10.4511242762265,12.0763069367428,10.1805294444454,10.8909103296605,12.6755484991576,13.8864707062168,10.4396393539793,10.2113351928887,11.8127548136127,11.5394753783867,12.6726656627428,6.29173586057955,11.8875927431082,8.56307474993779,15.9321036800589,11.7675967988021,6.76246414038483,13.6446389656361,12.8008641530633,10.6606446233284,10.6237382368752,7.38050739898011,10.2049173096894,9.87177311374404,22.8268522857105,6.50695912292767,7.46924181430171,6.2961391467759,6.08580364165509,9.40590923034426,9.93040821947537,11.7955416354832,10.5387897403773,10.158772287959,10.0637744569148,8.18710084870708,11.5453939052387,10.3557339958316,12.7372163600558,13.0259750768109,14.4107488329952,14.0223644710159,12.87423313892,11.5426658327128,11.0304416695596,14.573044397438,14.7587057349329,18.1474292507753,12.1379060961767,12.4020226203314,16.9022054776936,16.3863314715738,16.0597033135283,14.6095549167327,46.7452980211744,38.0733978673097,17.2117495556663,14.9005843004556,17.9816660786327,18.0505997351993,7.37707254195039,10.6037789425837,16.0909191902291,8.19921363022941,17.0184484208911,16.4888470587261,16.0415045339324,15.8522857241746,21.4549671887694,15.7818163272108,14.6256477840214,14.1381379225595,11.9229671574946,19.2310851960636,13.845391545054,12.8676695918578,13.2745138339963,10.6823479908192,11.4882951646605,10.7504895460862,14.1744908582771,15.6791925451403,12.9214146584111,9.08834323693764,10.6949213515416,12.009396801561,15.8127912862498,9.28219889233682,16.6815406819356,14.9450708045987,15.264324686365,14.1462443120851,15.4286003268778,18.3719882130133,16.4549020602121,19.4857567433344,27.2219181353904,36.8587803303047,16.3191014560672,8.57408515295696,9.68786560175433,8.38349656501366,12.4147237763262,10.5050175836839,11.9507143018239,17.4299783889879,10.2522528478712,15.4790150972417,8.51894825900674,4.89757988212197,6.28793447516716,11.8964650067392,28.7263546689615,32.0488825821177,34.6881934249104,13.3653886522116,13.91878371757,13.622404297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| |phase1_expression=10.4096750618116,5.58360652222978,14.1049764210756,12.7034968748869,13.5241847085514,7.55456723603504,8.1764424208434,23.6295681898085,19.42884365693,22.9383235795554,5.65019295144166,6.78063351460359,19.5168832121575,28.0619491764982,4.99664642723494,6.88415909125408,6.29605690315332,19.7163853348899,18.373334103169,20.3707032863054,12.246233781754,20.6525178497841,21.9407822876706,11.3594620183319,9.1763712426868,12.0588712464154,7.32295393470427,9.04979177280734,11.9714754257516,9.07308467135751,15.7428662565266,11.4305521222734,14.1464901144451,0,5.77703239502549,5.98444723290572,4.49172583777212,18.4153917524239,8.5946887897618,9.42342739152837,7.64700934440319,10.2456822743767,10.6812277666854,16.2406895188495,13.3817549209759,19.8230492334616,39.119567217402,13.9536100083486,16.2567775223509,13.026803237977,17.2183298599196,14.3752564364972,13.5903910906766,7.25362142011344,12.7715643674136,24.439646423415,17.4785398362642,15.9858348606007,27.3127222160457,20.6306481916093,24.0855933332348,23.3802727127701,20.4537803105562,68.3923785133863,70.2095117422552,63.943210345149,36.8508135937638,25.7426264565442,16.3829587447395,18.3608076131099,15.984697062705,13.9968982357864,17.0068776532742,17.7611658861683,13.9934387686625,12.8690630125403,22.0231761998777,15.3224805702225,17.2039317246993,22.0250100509424,21.5910838901687,17.1901412283731,17.0301629390842,16.8828783009504,16.8078072554491,19.1508580557884,15.233769845504,24.0455285114638,24.3838342532853,18.1371744256285,10.1452571045587,20.6501730475533,21.0791113449403,21.0484244738749,13.6453047664011,13.4408066129201,14.7466641138339,11.4188316127299,13.2490862347463,13.4269038313929,9.15482228548423,19.2489716121477,25.4805239706646,28.4426681261332,14.9378818297738,13.4280728701802,14.6602089054287,10.2765491747154,17.6077760880077,10.5393918736026,14.5727674483554,12.1786191324856,10.8389283710347,13.1128697280782,13.6402900277418,10.8073268543521,17.0564527736718,11.2787498397531,9.73071607144862,17.1472860944254,11.2629174414801,14.0613823409214,22.3670113461747,13.1751358655196,15.9179497178226,12.2619386500124,28.6358147569149,37.7938720525847,20.9665874670557,18.1246673679835,11.4375150704657,13.9476330845279,18.251553620189,16.8772201838018,15.584103341967,15.5751612545047,14.2575109390443,12.5651040316194,14.6579199891531,8.41767423545896,12.1012011955314,19.5416788768452,13.1445354757905,14.1662528765572,12.1104968489364,11.0177799444971,14.4300655821982,11.6416516832557,12.287375597172,11.7245769704048,14.7798944297717,19.070028721199,16.9608822027615,19.5021213252413,15.6394423670037,13.9323986772945,19.6619692447706,25.4774428043568,18.4706274607135,9.32065976409758,9.14651633926275,10.6236616261999,11.1270025725049,8.65762619688577,11.8785676923281,12.556833016522,14.4867636755794,10.7424114977796,12.341988743511,11.984224877774,10.9442892886905,10.8187990694746,14.9294078397914,10.468100663309,12.6173969138476,14.6124549578584,13.5471701023357,10.8424732332053,10.4511242762265,12.0763069367428,10.1805294444454,10.8909103296605,12.6755484991576,13.8864707062168,10.4396393539793,10.2113351928887,11.8127548136127,11.5394753783867,12.6726656627428,6.29173586057955,11.8875927431082,8.56307474993779,15.9321036800589,11.7675967988021,6.76246414038483,13.6446389656361,12.8008641530633,10.6606446233284,10.6237382368752,7.38050739898011,10.2049173096894,9.87177311374404,22.8268522857105,6.50695912292767,7.46924181430171,6.2961391467759,6.08580364165509,9.40590923034426,9.93040821947537,11.7955416354832,10.5387897403773,10.158772287959,10.0637744569148,8.18710084870708,11.5453939052387,10.3557339958316,12.7372163600558,13.0259750768109,14.4107488329952,14.0223644710159,12.87423313892,11.5426658327128,11.0304416695596,14.573044397438,14.7587057349329,18.1474292507753,12.1379060961767,12.4020226203314,16.9022054776936,16.3863314715738,16.0597033135283,14.6095549167327,46.7452980211744,38.0733978673097,17.2117495556663,14.9005843004556,17.9816660786327,18.0505997351993,7.37707254195039,10.6037789425837,16.0909191902291,8.19921363022941,17.0184484208911,16.4888470587261,16.0415045339324,15.8522857241746,21.4549671887694,15.7818163272108,14.6256477840214,14.1381379225595,11.9229671574946,19.2310851960636,13.845391545054,12.8676695918578,13.2745138339963,10.6823479908192,11.4882951646605,10.7504895460862,14.1744908582771,15.6791925451403,12.9214146584111,9.08834323693764,10.6949213515416,12.009396801561,15.8127912862498,9.28219889233682,16.6815406819356,14.9450708045987,15.264324686365,14.1462443120851,15.4286003268778,18.3719882130133,16.4549020602121,19.4857567433344,27.2219181353904,36.8587803303047,16.3191014560672,8.57408515295696,9.68786560175433,8.38349656501366,12.4147237763262,10.5050175836839,11.9507143018239,17.4299783889879,10.2522528478712,15.4790150972417,8.51894825900674,4.89757988212197,6.28793447516716,11.8964650067392,28.7263546689615,32.0488825821177,34.6881934249104,13.3653886522116,13.91878371757,13.622404297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| ||
|short_description=p1@B4galt7 | |||
}} | }} |
Latest revision as of 18:54, 1 October 2015
Short description: | p1@B4galt7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B4galt7_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000064701, ENSMUST00000133176, ENSMUST00000142654, NM_146045, uc007qrt.1, uc007qru.1, uc011yzw.1_5end |
EntrezGene: | B4galt7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.67e-11 | 97 |
somatic stem cell | 1.02e-10 | 91 |
multi fate stem cell | 1.02e-10 | 91 |
neural cell | 6.77e-10 | 43 |
ectodermal cell | 3.62e-09 | 44 |
neurectodermal cell | 3.62e-09 | 44 |
electrically responsive cell | 1.14e-08 | 39 |
electrically active cell | 1.14e-08 | 39 |
embryonic cell | 8.86e-08 | 70 |
neuron | 2.89e-07 | 33 |
neuronal stem cell | 2.89e-07 | 33 |
neuroblast | 2.89e-07 | 33 |
electrically signaling cell | 2.89e-07 | 33 |
CNS neuron (sensu Vertebrata) | 3.59e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-07 | 23 |
motile cell | 5.18e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.11e-11 | 75 |
central nervous system | 2.54e-10 | 73 |
ectoderm-derived structure | 1.08e-07 | 95 |
ectoderm | 1.08e-07 | 95 |
presumptive ectoderm | 1.08e-07 | 95 |
regional part of nervous system | 6.74e-07 | 54 |