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FFCP PHASE1:Mm9::chr1:20608073..20608170,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:20608073..20608170,-
|DHSsupport=NA
|short_description=p1@Pkhd1
|DPIdataset=NA
|description=CAGE_peak_1_at_Pkhd1_5end
|association_with_transcript=0bp_to_ENSMUST00000060305,ENSMUST00000088448,ENSMUST00000128051,ENSMUST00000147480,NM_153179,uc007akv.1,uc007akw.1,uc007akx.1_5end
|EntrezGene=241035
|EntrezGene=241035
|HGNC=
|HGNC=
|MCL_coexpression_id=479
|TSSclassifier=NA
|UniProt=E9Q8U0,E9PZ36,Q6T3A5,Q8CIS7,Q3UNU5
|UniProt=E9Q8U0,E9PZ36,Q6T3A5,Q8CIS7,Q3UNU5
|association_with_transcript=0bp_to_ENSMUST00000060305,ENSMUST00000088448,ENSMUST00000128051,ENSMUST00000147480,NM_153179,uc007akv.1,uc007akw.1,uc007akx.1_5end
|cluster_id=chr1:20608073..20608170,-
|description=CAGE_peak_1_at_Pkhd1_5end
|id=chr1:20608073..20608170,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!1.66e-18!85;UBERON:0001007!1.02e-14!128;UBERON:0001555!1.02e-14!128;UBERON:0007026!1.02e-14!128;UBERON:0004119!1.13e-14!130;UBERON:0000925!1.13e-14!130;UBERON:0006595!1.13e-14!130;UBERON:0000466!1.67e-14!79;UBERON:0004921!1.85e-14!126;UBERON:0004185!1.85e-14!126;UBERON:0009569!1.18e-13!66;UBERON:0002100!9.13e-13!98;UBERON:0005409!1.10e-11!59;UBERON:0005172!2.51e-11!49;UBERON:0005173!2.51e-11!49;UBERON:0002417!2.51e-11!49;UBERON:0000916!2.51e-11!49;UBERON:0000160!6.26e-10!43;UBERON:0006554!7.33e-10!16;UBERON:0000077!7.66e-10!97;UBERON:0001008!8.32e-10!17;UBERON:0003104!9.88e-10!131;UBERON:0009142!9.88e-10!131;UBERON:0009854!2.55e-09!23;UBERON:0009856!2.55e-09!23;UBERON:0002113!2.64e-09!14;UBERON:0003918!2.64e-09!14;UBERON:0005095!2.64e-09!14;UBERON:0007687!2.64e-09!14;UBERON:0001041!3.51e-09!92;UBERON:0001045!4.76e-09!13;UBERON:0002108!4.89e-09!16;UBERON:0002107!6.42e-09!22;UBERON:0007499!6.42e-09!22;UBERON:0006925!6.42e-09!22;UBERON:0009497!6.42e-09!22;UBERON:0000015!6.42e-09!22;UBERON:0002423!6.42e-09!22;UBERON:0006235!6.42e-09!22;UBERON:0008835!6.42e-09!22;UBERON:0003894!6.42e-09!22;UBERON:0004161!6.42e-09!22;UBERON:0008836!6.42e-09!22;UBERON:0001264!1.12e-08!12;UBERON:0003922!1.12e-08!12;UBERON:0002114!1.12e-08!12;UBERON:0003923!1.12e-08!12;UBERON:0003924!1.12e-08!12;UBERON:0003921!1.12e-08!12;UBERON:0002365!1.75e-08!25;UBERON:0002330!1.75e-08!25;UBERON:0000464!4.51e-07!57
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.06e-22,79;UBERON:0002100,1.29e-17,90;UBERON:0009569,8.08e-14,66;UBERON:0005172,9.20e-12,49;UBERON:0005173,9.20e-12,49;UBERON:0002417,9.20e-12,49;UBERON:0000916,9.20e-12,49;UBERON:0009854,5.40e-10,23;UBERON:0009856,5.40e-10,23;UBERON:0002113,5.62e-10,14;UBERON:0003918,5.62e-10,14;UBERON:0011143,5.62e-10,14;UBERON:0005095,5.62e-10,14;UBERON:0007687,5.62e-10,14;UBERON:0006554,9.55e-10,18;UBERON:0001008,9.65e-10,19;UBERON:0002107,1.48e-09,22;UBERON:0007499,1.48e-09,22;UBERON:0006925,1.48e-09,22;UBERON:0009497,1.48e-09,22;UBERON:0000015,1.48e-09,22;UBERON:0002423,1.48e-09,22;UBERON:0006235,1.48e-09,22;UBERON:0008835,1.48e-09,22;UBERON:0003894,1.48e-09,22;UBERON:0004161,1.48e-09,22;UBERON:0008836,1.48e-09,22;UBERON:0001264,2.70e-09,12;UBERON:0002365,4.39e-09,25;UBERON:0002330,4.39e-09,25;UBERON:0001007,1.53e-08,116;UBERON:0001555,1.53e-08,116;UBERON:0007026,1.53e-08,116;UBERON:0004119,1.60e-08,118;UBERON:0000925,1.60e-08,118;UBERON:0006595,1.60e-08,118;UBERON:0004921,2.51e-08,114;UBERON:0003104,1.03e-07,61;UBERON:0009142,1.03e-07,61
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|phase1_expression=0,1.39590163055744,0.909998478779072,2.41971369045464,1.00179145989269,1.6787927191189,3.27057696833736,0.387369970324729,0,0.468129052643987,0.513653904676515,0.239316476986009,0.684802919724823,0.262261207256992,0.333109761815663,0,0,0.315462165358238,0.411343300817216,0,14.4573593256819,0.397163804803541,0.522399578277871,3.19984845586813,1.60586496747019,2.8711598205751,0.86152399231815,2.15471232685889,15.771943814879,7.30887376303799,1.77384408524244,1.27006134691926,2.46025915033828,15.8481681015439,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.709638518536602,1.10128051297009,0.782391344348039,0.436050312760893,0.439372365468944,0.388859798148567,0.699932108126813,1.43752564364972,0.335565212115473,0,1.00828139742739,0,0.286533439938757,1.54701627683233,1.01158230429799,0,0.633831403506179,0.677689064138264,3.55717918444456,0.899899717281399,0,2.1314403448383,1.19840044207362,1.15265491596466,0.414758449233911,0.270011876663381,0.420649922702764,0.856952953211411,1.10434270475807,0.122490799214954,0.191690942036473,1.83843757322004,0,0.383062014255563,0.614426133024974,0.395658863190582,0,3.12548022334056,0.837548997004143,1.68828783009504,0.15279824777681,0,0.142371680799103,0.559198337475902,0.227178579999552,0.226714680320357,202.035548625069,6.0229671388697,2.719885334831,3.2382191498269,17.5439632710871,10.3046184032387,6.74133216632409,0.340860645156116,0.259786004602869,0,0,1.28326477414318,0,14.2213340630666,3.68034769719064,3.54703811665138,4.54972000513305,13.7020655662872,1.55362730188303,0.593768556259299,1.90833859442749,2.13125834818499,2.07553947530453,0.301445281105245,1.17588707135705,0.376999773989026,1.97755974187499,1.01219549843938,0,0.485300549842228,0.883366073841574,0.484875253135222,7.45567044872489,1.17112318804619,0.83778682725382,6.64188343542338,0,0,0,1.64769703345305,2.74500361691176,0.251308704225729,0.869121600961382,0.255715457330331,1.87009240103604,0.486723789203273,12.220723662038,11.9430691785689,52.819056512638,1.26265113531884,0.130120442962704,1.37941262660084,1.0803727788321,0.753524089178575,0.340182495756639,0,0.374806898238915,1.29351685369508,0.215567992932842,1.32374256117473,0.703804496655795,1.31517439456545,0.278047249225598,0.348252166522167,0,8.35943920637671,0,0,0.284163499395593,1.24275463521301,0,0.36012412292203,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,1.07309360559848,0.350296027101508,0.658239399653922,0.820837320395476,0.56748166682099,1.16959989940266,1.09775057645525,0.939444931322602,1.26173969138476,0.308713837137853,5.94753809370836,2.11560453330835,2.13288250535234,2.78684006232526,5.28356591420583,7.05892336181699,2.44615848229357,4.56541502670142,3.79623249235609,2.30578536613615,5.7807098024062,5.76973768919337,7.01870713628832,1.79763881730844,3.24207074812041,4.38110801159608,7.01771233526402,20.1077382193123,41.7018621990398,55.3931611739255,66.1377981241604,57.6516439498419,181.046205786749,188.645769117932,222.153199895545,147.459610886552,20.4552312690133,2.8363667971736,2.35870794135844,2.47348323623339,3.65148218499305,4.82354319504834,6.3656462945355,5.75392274901621,5.5125977103512,6.86403532970204,27.3159592401974,16.7463426450827,27.4593152340813,22.9846778931872,20.9894973820637,16.8855232477179,3.69506380333209,2.84237117655727,4.4000543639347,3.39490171550376,7.04070744865506,4.18765643604539,3.33261097240419,1.95133647857799,3.62560831444239,3.98636441367795,1.91345722388985,0.983179888294428,0.518054945597687,1.44649058581512,1.50791283939272,1.08781136763742,2.45882136509518,1.65562047782839,0.160550589987792,0.937693492737625,0.655739781506702,1.00988370881749,0.315508219416257,0,0.430846795465598,0.716906393857656,1.11399337041197,0.566153061577665,0.404810701674894,0.584511715822624,1.58115111178609,0.642642632843614,2.83880170416537,2.49291845134157,3.4206261464251,5.27904393512113,94.2490482213736,17.7229864393136,17.2324427469908,36.4007803928883,25.986566573508,47.9598830792527,38.2473873888967,73.4338133544561,69.1604914066359,56.8866164284469,55.8718625447493,53.6304824890572,1.02131881726136,0.540183282093931,0.517434735131018,0.214337035031592,1.59606210278046,0,0.493647061806363,0.913394847343798,1.40803024838226,1.27099242518292,2.8668691747145,0.32977250588296,0.645857706783622,0.180938774784468,0.119372344003136,0.492422699235184,2.04036585640896,1.29797711407357,0.512612642393558,2.27025554759545,1.29636169158798,0.376736914009382,0.27338845544205,0.686334519619568,0,0.139951452323658,0,14.3200592702267,3.00519193902079,11.9958485604841,7.77638453916969,9.61806161666556,12.8833912610245,9.17077555416781,9.4224939526883,8.37619014348895,6.99920855775682,1.24267862617385,1.69107881605257,0.897099276263873,0.66183396182839,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,4.03633593016245,0.524296722128554,0.483168241652012,2.59227005632079,0.948033361884535,0.202725215290164,0.513554785824136,0.51968329191118,0.179026695667481,1.19208812868759,0.360586348559907,1.03382669022204,0.403865799792591,0.0762068066549998,0.705783295957884,0.682205165178267,0.577271049841977,0.233753804363138,0.453460767230423,1.55390167361845,0.0897138566094757,0.503653849092235,38.6379188064381,15.2022805115457,19.2309205480628,2.78678892802786,5.01572104035363,0,0.920650473014354,0.572895513439397,0.515559547031063,1.37016503954128,0,2.02506750069542,0.900642406448441,1.35942722695261,3.10656187051092,0.31136204275253,1.59609949360412,1.53660245178721,1.70174701947806,1.25767897576789,1.2869045591501,3.77819437262746,2.88449080134452,4.81378814387723,3.79045817645696,4.81610669791456,4.14977951049368,3.55837728385553,2.17685518176556,2.29741875822453,3.33405583898152,3.47652977834566,3.08654752741928,2.88460130562315,3.38557516309114,5.82877729055206,2.66213709239006,2.86123427936785,2.90692833264657,3.57615645578256,2.96151127620868,2.19513567447327,3.94604567156764,3.12349461845482,3.92799590160417,2.60997039873183,1.67457620038458,1.63692417267876,2.32405261778949,3.47231899766054,1.24905288968973,3.50897412668113,3.65280791882107,0.956441660344217,0,0.231867835620421
|short_description=p1@Pkhd1
}}
}}

Latest revision as of 00:56, 27 September 2015

Short description:p1@Pkhd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pkhd1_5end
Coexpression cluster:MCL_coexpression_mm9:479
Association with transcript: 0bp_to_ENSMUST00000060305, ENSMUST00000088448, ENSMUST00000128051, ENSMUST00000147480, NM_153179, uc007akv.1, uc007akw.1, uc007akx.1_5end
EntrezGene:Pkhd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pkhd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B915.77
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3202.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.70
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.94
epididymis, adult.CNhs10490.58-23B252.82
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I68.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F820.11
kidney, embryo E16.CNhs10584.464-22A541.70
kidney, embryo E17.CNhs11028.483-18I255.39
kidney, embryo E18.CNhs11001.1288-20C766.14
kidney, neonate N00.CNhs11214.646-21G757.65
kidney, neonate N10.CNhs11206.758-6D5181.05
kidney, neonate N20.CNhs11113.832-19I1188.65
kidney, neonate N25.CNhs11122.1353-25F3222.15
kidney, neonate N30.CNhs11203.1385-42H1147.46
liver, adult pregnant day01.CNhs10466.508-5B220.46
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B927.46
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H120.99
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E494.25
pancreas, embryo E14.CNhs11012.405-44F417.72
pancreas, embryo E15.CNhs11042.1556-45F217.23
pancreas, embryo E16.CNhs11003.460-26E536.40
pancreas, embryo E17.CNhs10599.1558-45G325.99
pancreas, embryo E18.CNhs10580.1535-43I747.96
pancreas, neonate N00.CNhs11105.645-26G938.25
pancreas, neonate N01.CNhs11138.1531-43D773.43
pancreas, neonate N02.CNhs11139.1539-43D869.16
pancreas, neonate N16.CNhs11136.787-43B656.89
pancreas, neonate N25.CNhs11094.1555-45E255.87
pancreas, neonate N30.CNhs11182.1548-44H553.63
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G812.00
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C612.88
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E438.64
uterus, adult pregnant day19.CNhs10497.590-15F515.20
uterus, adult.CNhs10509.92-27E519.23
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element4.06e-2279
trunk1.29e-1790
subdivision of trunk8.08e-1466
abdomen element9.20e-1249
abdominal segment element9.20e-1249
abdominal segment of trunk9.20e-1249
abdomen9.20e-1249
digestive tract diverticulum5.40e-1023
sac5.40e-1023
kidney5.62e-1014
kidney mesenchyme5.62e-1014
upper urinary tract5.62e-1014
kidney rudiment5.62e-1014
kidney field5.62e-1014
urinary system structure9.55e-1018
renal system9.65e-1019
liver1.48e-0922
epithelial sac1.48e-0922
digestive gland1.48e-0922
epithelium of foregut-midgut junction1.48e-0922
anatomical boundary1.48e-0922
hepatobiliary system1.48e-0922
foregut-midgut junction1.48e-0922
hepatic diverticulum1.48e-0922
liver primordium1.48e-0922
septum transversum1.48e-0922
liver bud1.48e-0922
pancreas2.70e-0912
exocrine gland4.39e-0925
exocrine system4.39e-0925
digestive system1.53e-08116
digestive tract1.53e-08116
primitive gut1.53e-08116
endoderm-derived structure1.60e-08118
endoderm1.60e-08118
presumptive endoderm1.60e-08118
subdivision of digestive tract2.51e-08114
mesenchyme1.03e-0761
entire embryonic mesenchyme1.03e-0761
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