FFCP PHASE1:Mm9::chr2:103810335..103810349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16909 | |EntrezGene=16909 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=512 | |||
|TSSclassifier=NA | |||
|UniProt=A2BHP3 | |UniProt=A2BHP3 | ||
|association_with_transcript=-30bp_to_ENSMUST00000111140_5end | |||
|cluster_id=chr2:103810335..103810349,+ | |||
|description=CAGE_peak_10_at_Lmo2_5end | |||
|id=chr2:103810335..103810349,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.88e-14,19;CL:0000557,5.23e-13,7;CL:0002320,6.39e-11,46;CL:0000134,6.39e-11,46;CL:0002092,4.02e-09,3;CL:0002540,4.02e-09,3;CL:0000988,4.20e-09,32;CL:0002032,4.20e-09,32;CL:0000037,4.20e-09,32;CL:0000837,4.20e-09,32;CL:0000763,4.51e-09,16;CL:0000219,9.25e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!8.19e-07!14;UBERON:0000117!8.19e-07!14;UBERON:0000171!8.19e-07!14;UBERON:0000170!8.19e-07!14;UBERON:0005597!8.19e-07!14;UBERON:0000118!8.19e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.80e-18,16;UBERON:0001474,2.34e-12,22;UBERON:0004765,2.34e-12,22;UBERON:0001434,2.34e-12,22;UBERON:0002048,8.75e-12,14;UBERON:0000117,8.75e-12,14;UBERON:0000171,8.75e-12,14;UBERON:0000170,8.75e-12,14;UBERON:0005597,8.75e-12,14;UBERON:0000118,8.75e-12,14;UBERON:0002384,6.39e-11,46;UBERON:0005153,1.96e-09,17;UBERON:0005178,1.96e-09,17;UBERON:0005181,1.96e-09,17;UBERON:0002224,1.96e-09,17;UBERON:0000915,1.96e-09,17;UBERON:0008947,1.96e-09,17;UBERON:0003258,1.96e-09,17;UBERON:0000310,3.01e-09,6;UBERON:0001443,3.01e-09,6;UBERON:0005157,8.61e-08,20;UBERON:0002204,9.09e-08,32 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.946386496074713,1.50825876966313,2.12194825899015,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0.257259436035947,0,0,0.404632921719196,0,0,0,0,6.74924787961049,4.94433181283487,4.9733608046227,2.39680088414724,0.384218305321555,0.518448061542388,0.270011876663381,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,0.191690942036473,0,1.10115880999389,0.383062014255563,0,0.395658863190582,0.274462930807229,0.52091337055676,0.558365998002762,0,0.45839474333043,0.589257170947335,0.142371680799103,0.372798891650601,0.075726193333184,0,1.73918693221007,0.860423876981386,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0,0,2.54805239706646,0,0,0,0,0.22836775943812,1.03575153458869,0.742210695324124,0.346970653532272,1.82679286987285,0.461230994512117,0.150722640552623,0.23517741427141,0.628332956648377,0.247194967734374,0.86759614151947,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,2.39630249011841,2.99951365496704,2.92261522268049,0.149790639404823,0,0,0.173824320192276,0,0.62336413367868,0.324482526135515,0.611036183101898,0.248813941220186,0,0,0.260240885925407,0.229902104433473,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0,2.1066395619397,1.80143534980301,3.12579849335152,0.207125772535502,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.56748166682099,0.146199987425332,0.658650345873152,0.134206418760372,0.210289948564127,0.514523061896422,0,0.264450566663544,0.213288250535234,0.696710015581316,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0.397912944082302,0.19496408711912,0,0.648414149624083,0.398282546508734,0.758671603812327,0.342745537829186,2.25415471346161,0.203651327845314,0.969762435838129,0.631222379012867,2.02356918797623,0.590440591918409,0.31399745568275,0.493588655687202,0,0,0.196558995113203,0,0,0.241177159752417,0,1.15078454980324,0,0.274561413188081,1.43768206527355,0,0,0,0,0,1.47802552133284,0.947457058852424,1.46668478797823,1.01847051465113,1.17345124144251,1.17254380209271,2.14239276797412,0,0.788175720530955,1.10732344824387,1.91345722388985,1.14704320301017,0.345369963731791,0.867894351489069,3.01582567878545,2.17562273527484,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0,0,0,1.02131881726136,0.36012218806262,0.388076051348264,0.214337035031592,0.886701168211368,0.178368817602071,0.658196082408484,0,0,0,0,0.49465875882444,0.322928853391811,0.361877549568935,0.238744688006273,0,0.291480836629851,0.18542530201051,0.512612642393558,0.206386867963223,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,10.3686842296252,10.636310376598,10.7795979567451,0,0.474503990371703,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.194915761479505,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0,0.419226325255965,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.459483751644906,0,0.463537303779422,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.679020569229309,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0.964533054905707,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0.463735671240843 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| ||
|short_description=p10@Lmo2 | |||
}} | }} |
Latest revision as of 21:55, 1 October 2015
Short description: | p10@Lmo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Lmo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:512 |
Association with transcript: | -30bp_to_ENSMUST00000111140_5end |
EntrezGene: | Lmo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.88e-14 | 19 |
granulocyte monocyte progenitor cell | 5.23e-13 | 7 |
connective tissue cell | 6.39e-11 | 46 |
mesenchymal cell | 6.39e-11 | 46 |
bone marrow cell | 4.02e-09 | 3 |
mesenchymal stem cell of the bone marrow | 4.02e-09 | 3 |
hematopoietic cell | 4.20e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.20e-09 | 32 |
hematopoietic stem cell | 4.20e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.20e-09 | 32 |
myeloid cell | 4.51e-09 | 16 |
motile cell | 9.25e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.80e-18 | 16 |
bone element | 2.34e-12 | 22 |
skeletal element | 2.34e-12 | 22 |
skeletal system | 2.34e-12 | 22 |
lung | 8.75e-12 | 14 |
respiratory tube | 8.75e-12 | 14 |
respiration organ | 8.75e-12 | 14 |
pair of lungs | 8.75e-12 | 14 |
lung primordium | 8.75e-12 | 14 |
lung bud | 8.75e-12 | 14 |
connective tissue | 6.39e-11 | 46 |
epithelial bud | 1.96e-09 | 17 |
thoracic cavity element | 1.96e-09 | 17 |
thoracic segment organ | 1.96e-09 | 17 |
thoracic cavity | 1.96e-09 | 17 |
thoracic segment of trunk | 1.96e-09 | 17 |
respiratory primordium | 1.96e-09 | 17 |
endoderm of foregut | 1.96e-09 | 17 |
breast | 3.01e-09 | 6 |
chest | 3.01e-09 | 6 |
epithelial fold | 8.61e-08 | 20 |
musculoskeletal system | 9.09e-08 | 32 |