FFCP PHASE1:Mm9::chr2:122126867..122126886,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:122126867..122126886,+ to FFCP PHASE1:Mm9::chr2:122126867..122126886,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:122126867..122126886,+ | |||
|description=CAGE_peak_at_chr2:122126867..122126886,+ | |||
|id=chr2:122126867..122126886,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.49e-18!9;CL:0002251!8.49e-18!9;CL:0000239!5.56e-13!6;CL:0000677!5.56e-13!6;CL:0000212!5.56e-13!6;CL:0000584!5.56e-13!6;CL:0000075!5.32e-11!7;CL:0000066!6.09e-10!25;CL:0002076!6.38e-10!15;CL:0000473!1.29e-07!3;CL:0000627!1.29e-07!3;CL:0000682!1.29e-07!3;CL:0000223!5.47e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.70e-19,9;CL:0002251,9.70e-19,9;CL:0000239,2.06e-15,6;CL:0000677,2.06e-15,6;CL:0000584,2.06e-15,6;CL:0000075,3.53e-13,7;CL:0000066,6.49e-13,25;CL:0000682,5.33e-12,3;CL:0002076,6.51e-11,15;CL:0000223,5.69e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.98e-30!15;UBERON:0000160!2.03e-29!43;UBERON:0005409!8.97e-27!59;UBERON:0001242!3.30e-26!13;UBERON:0000060!3.30e-26!13;UBERON:0001262!3.30e-26!13;UBERON:0004786!3.30e-26!13;UBERON:0003350!8.49e-18!9;UBERON:0004808!8.49e-18!9;UBERON:0001277!8.49e-18!9;UBERON:0004923!2.87e-17!24;UBERON:0000485!3.26e-14!11;UBERON:0001007!8.19e-12!128;UBERON:0001555!8.19e-12!128;UBERON:0007026!8.19e-12!128;UBERON:0004119!1.67e-11!130;UBERON:0000925!1.67e-11!130;UBERON:0006595!1.67e-11!130;UBERON:0004921!3.98e-10!126;UBERON:0004185!3.98e-10!126;UBERON:0000331!5.25e-08!3;UBERON:0002116!5.25e-08!3;UBERON:0001204!5.25e-08!3;UBERON:0001168!5.25e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.29e-39,15;UBERON:0000160,1.03e-38,31;UBERON:0001242,1.54e-32,13;UBERON:0001262,1.54e-32,13;UBERON:0004786,1.54e-32,13;UBERON:0005409,2.30e-24,47;UBERON:0004923,1.77e-23,24;UBERON:0003350,9.70e-19,9;UBERON:0004808,9.70e-19,9;UBERON:0001277,9.70e-19,9;UBERON:0002108,1.36e-15,4;UBERON:0000485,3.48e-15,11;UBERON:0000331,1.15e-12,3;UBERON:0002116,1.15e-12,3;UBERON:0001204,1.15e-12,3;UBERON:0001168,1.15e-12,3;UBERON:0001007,5.34e-10,116;UBERON:0001555,5.34e-10,116;UBERON:0007026,5.34e-10,116;UBERON:0004119,9.19e-10,118;UBERON:0000925,9.19e-10,118;UBERON:0006595,9.19e-10,118;UBERON:0001962,5.25e-08,2;UBERON:0001961,5.25e-08,2;UBERON:0001744,5.25e-08,2;UBERON:0004921,6.02e-08,114 | |||
|phase1_expression=0,5.23463111459042,5.0049916332849,0.60492842261366,4.00716583957078,2.85394762250213,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,2.2940928106717,4.01962374880514,6.03066794622705,4.95583835177545,12.5415456841207,8.82105454159758,7.76056787293567,0,0,0,1.44425809875637,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,7.40461586657924,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,2.37264530772256,0.164698954724011,1.50801125280162,0.994782360205754,0.19496408711912,1.79763881730844,2.16138049874694,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.41326727862668,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.23463111459042,5.0049916332849,0.60492842261366,4.00716583957078,2.85394762250213,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,2.2940928106717,4.01962374880514,6.03066794622705,4.95583835177545,12.5415456841207,8.82105454159758,7.76056787293567,0,0,0,1.44425809875637,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,7.40461586657924,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,2.37264530772256,0.164698954724011,1.50801125280162,0.994782360205754,0.19496408711912,1.79763881730844,2.16138049874694,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.41326727862668,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:122126867..122126886,+ | |||
}} | }} |
Latest revision as of 22:18, 3 August 2015
Short description: | p@chr2:122126867..122126886, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:122126867..122126886, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.70e-19 | 9 |
epithelial cell of alimentary canal | 9.70e-19 | 9 |
brush border epithelial cell | 2.06e-15 | 6 |
gut absorptive cell | 2.06e-15 | 6 |
enterocyte | 2.06e-15 | 6 |
columnar/cuboidal epithelial cell | 3.53e-13 | 7 |
epithelial cell | 6.49e-13 | 25 |
M cell of gut | 5.33e-12 | 3 |
endo-epithelial cell | 6.51e-11 | 15 |
endodermal cell | 5.69e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.29e-39 | 15 |
intestine | 1.03e-38 | 31 |
intestinal mucosa | 1.54e-32 | 13 |
wall of intestine | 1.54e-32 | 13 |
gastrointestinal system mucosa | 1.54e-32 | 13 |
gastrointestinal system | 2.30e-24 | 47 |
organ component layer | 1.77e-23 | 24 |
epithelium of mucosa | 9.70e-19 | 9 |
gastrointestinal system epithelium | 9.70e-19 | 9 |
intestinal epithelium | 9.70e-19 | 9 |
small intestine | 1.36e-15 | 4 |
simple columnar epithelium | 3.48e-15 | 11 |
ileal mucosa | 1.15e-12 | 3 |
ileum | 1.15e-12 | 3 |
mucosa of small intestine | 1.15e-12 | 3 |
wall of small intestine | 1.15e-12 | 3 |
digestive system | 5.34e-10 | 116 |
digestive tract | 5.34e-10 | 116 |
primitive gut | 5.34e-10 | 116 |
endoderm-derived structure | 9.19e-10 | 118 |
endoderm | 9.19e-10 | 118 |
presumptive endoderm | 9.19e-10 | 118 |
gut-associated lymphoid tissue | 5.25e-08 | 2 |
mucosa-associated lymphoid tissue | 5.25e-08 | 2 |
lymphoid tissue | 5.25e-08 | 2 |
subdivision of digestive tract | 6.02e-08 | 114 |