FFCP PHASE1:Mm9::chr2:6134081..6134090,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:6134081..6134090,- to FFCP PHASE1:Mm9::chr2:6134081..6134090,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67856 | |EntrezGene=67856 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D7J9 | |UniProt=Q9D7J9 | ||
|association_with_transcript=-2bp_to_ENSMUST00000042658_5end | |||
|cluster_id=chr2:6134081..6134090,- | |||
|description=CAGE_peak_3_at_Echdc3_5end | |||
|id=chr2:6134081..6134090,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.92e-12!47;UBERON:0005172!1.29e-07!49;UBERON:0005173!1.29e-07!49;UBERON:0002417!1.29e-07!49;UBERON:0000916!1.29e-07!49;UBERON:0005256!1.29e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.70e-13,47;UBERON:0005172,2.05e-10,49;UBERON:0005173,2.05e-10,49;UBERON:0002417,2.05e-10,49;UBERON:0000916,2.05e-10,49;UBERON:0005256,2.77e-09,45;UBERON:0003104,2.86e-09,61;UBERON:0009142,2.86e-09,61;UBERON:0002107,9.41e-08,22;UBERON:0007499,9.41e-08,22;UBERON:0006925,9.41e-08,22;UBERON:0009497,9.41e-08,22;UBERON:0000015,9.41e-08,22;UBERON:0002423,9.41e-08,22;UBERON:0006235,9.41e-08,22;UBERON:0008835,9.41e-08,22;UBERON:0003894,9.41e-08,22;UBERON:0004161,9.41e-08,22;UBERON:0008836,9.41e-08,22;UBERON:0009854,2.65e-07,23;UBERON:0009856,2.65e-07,23 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.380046838912748,0.504060259519861,0,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.183546752161682,0.782391344348039,0,1.31811709640683,0.388859798148567,0.699932108126813,5.75010257459886,0,0,0,0.257259436035947,1.43266719969378,1.54701627683233,0.404632921719196,0.528990979272033,0,0.677689064138264,0.889294796111139,0,0,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.263772575460388,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,2.58127163094416,0.679971333707751,5.93673510801599,0.649776417447669,3.13618820968135,1.12355536105401,0.852151612890289,0.519572009205738,1.41335829804136,0.845060518660083,0,0,0,0,0.253359865475099,0,1.48439043634778,0,2.67195850316685,0.173485326766136,0.608930956624282,0.461230994512117,1.20578112442098,1.41106448562846,3.26733137457156,0.247194967734374,2.4581890676385,0,0.647067399789637,0.441683036920787,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0.381210681219194,0,0.457500602818626,0,0,0,0.41557608911912,0.486723789203273,0.305518091550949,0.497627882440372,1.0108910337347,0.631325567659422,0.520481771850815,0.459804208866946,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.0937017245597288,1.29351685369508,0.431135985865684,0.189106080167819,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,1.18372367792605,0.590292695242212,0.308534225774757,0.465067889500816,0.804820204198858,1.5179494507732,1.81015834904829,1.47750717671186,2.02672023864639,0.730999937126662,2.19550115291051,1.61047702512446,0.210289948564127,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0,0.667134131534611,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0,0.398282546508734,0.758671603812327,0.342745537829186,0,0.814605311381257,1.35766741017338,0.420814919341911,1.13825766823663,1.62371162777562,3.1399745568275,0.987177311374404,1.48226313543574,0.333690211432188,0,0.224862112384854,1.21716072833102,0.72353147925725,1.2731292589071,1.15078454980324,0.972811360650212,2.19649130550465,0,0.744281895337007,2.18426371180192,0.505157755894224,1.61457672169721,4.82443521363367,0,0,0.651859905768103,0.509235257325564,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.637819074629948,0.491589944147214,0.690739927463582,0,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,1.41940085208269,0.890328018336276,0.325773918707152,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.516856586336442,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,2.06271086496374,2.04263763452273,1.08036656418786,0.517434735131018,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0.913394847343798,0.469343416127421,0.63549621259146,0.441056796109924,0.65954501176592,0.322928853391811,0.301564624640779,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.632671987162271,1.82987520414164,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0.785267825952089,0.259229946583586,0,0,0.598066184175915,0.165458490457098,1.16670713006429,0.904118764344118,0.337912250981556,0.704143431874524,1.0416350787516,0.524296722128554,0.966336483304024,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,1.00314420807073,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0,0,1.10306105070008,0.888986911206461,1.03017528619447,1.60459604795908,1.26348605881899,0,0.565879024158229,0.842773567228942,0.768301828858431,0.459483751644906,1.42888107384922,0.927074607558844,1.54327376370964,0.824171801606613,0.294397840268795,0,0.354951612318675,0.476872379894642,0.726732083161643,0.941093804153306,1.35383372626682,0.365855945745545,1.05227884575137,0.135804113845862,0.561142271657738,0.949080144993393,0.394017929502254,0.818462086339379,1.08455788830176,0.964533054905707,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,1.32354851471709,0.695603506861264 | |phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.380046838912748,0.504060259519861,0,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.183546752161682,0.782391344348039,0,1.31811709640683,0.388859798148567,0.699932108126813,5.75010257459886,0,0,0,0.257259436035947,1.43266719969378,1.54701627683233,0.404632921719196,0.528990979272033,0,0.677689064138264,0.889294796111139,0,0,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.263772575460388,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,2.58127163094416,0.679971333707751,5.93673510801599,0.649776417447669,3.13618820968135,1.12355536105401,0.852151612890289,0.519572009205738,1.41335829804136,0.845060518660083,0,0,0,0,0.253359865475099,0,1.48439043634778,0,2.67195850316685,0.173485326766136,0.608930956624282,0.461230994512117,1.20578112442098,1.41106448562846,3.26733137457156,0.247194967734374,2.4581890676385,0,0.647067399789637,0.441683036920787,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0.381210681219194,0,0.457500602818626,0,0,0,0.41557608911912,0.486723789203273,0.305518091550949,0.497627882440372,1.0108910337347,0.631325567659422,0.520481771850815,0.459804208866946,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.0937017245597288,1.29351685369508,0.431135985865684,0.189106080167819,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,1.18372367792605,0.590292695242212,0.308534225774757,0.465067889500816,0.804820204198858,1.5179494507732,1.81015834904829,1.47750717671186,2.02672023864639,0.730999937126662,2.19550115291051,1.61047702512446,0.210289948564127,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0,0.667134131534611,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0,0.398282546508734,0.758671603812327,0.342745537829186,0,0.814605311381257,1.35766741017338,0.420814919341911,1.13825766823663,1.62371162777562,3.1399745568275,0.987177311374404,1.48226313543574,0.333690211432188,0,0.224862112384854,1.21716072833102,0.72353147925725,1.2731292589071,1.15078454980324,0.972811360650212,2.19649130550465,0,0.744281895337007,2.18426371180192,0.505157755894224,1.61457672169721,4.82443521363367,0,0,0.651859905768103,0.509235257325564,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.637819074629948,0.491589944147214,0.690739927463582,0,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,1.41940085208269,0.890328018336276,0.325773918707152,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0.922305443831782,0.516856586336442,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,2.06271086496374,2.04263763452273,1.08036656418786,0.517434735131018,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0.913394847343798,0.469343416127421,0.63549621259146,0.441056796109924,0.65954501176592,0.322928853391811,0.301564624640779,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.632671987162271,1.82987520414164,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0.785267825952089,0.259229946583586,0,0,0.598066184175915,0.165458490457098,1.16670713006429,0.904118764344118,0.337912250981556,0.704143431874524,1.0416350787516,0.524296722128554,0.966336483304024,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,1.00314420807073,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0,0,1.10306105070008,0.888986911206461,1.03017528619447,1.60459604795908,1.26348605881899,0,0.565879024158229,0.842773567228942,0.768301828858431,0.459483751644906,1.42888107384922,0.927074607558844,1.54327376370964,0.824171801606613,0.294397840268795,0,0.354951612318675,0.476872379894642,0.726732083161643,0.941093804153306,1.35383372626682,0.365855945745545,1.05227884575137,0.135804113845862,0.561142271657738,0.949080144993393,0.394017929502254,0.818462086339379,1.08455788830176,0.964533054905707,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,1.32354851471709,0.695603506861264 | ||
|short_description=p3@Echdc3 | |||
}} | }} |
Latest revision as of 19:56, 26 September 2015
Short description: | p3@Echdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Echdc3_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENSMUST00000042658_5end |
EntrezGene: | Echdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 8.70e-13 | 47 |
abdomen element | 2.05e-10 | 49 |
abdominal segment element | 2.05e-10 | 49 |
abdominal segment of trunk | 2.05e-10 | 49 |
abdomen | 2.05e-10 | 49 |
trunk mesenchyme | 2.77e-09 | 45 |
mesenchyme | 2.86e-09 | 61 |
entire embryonic mesenchyme | 2.86e-09 | 61 |
liver | 9.41e-08 | 22 |
epithelial sac | 9.41e-08 | 22 |
digestive gland | 9.41e-08 | 22 |
epithelium of foregut-midgut junction | 9.41e-08 | 22 |
anatomical boundary | 9.41e-08 | 22 |
hepatobiliary system | 9.41e-08 | 22 |
foregut-midgut junction | 9.41e-08 | 22 |
hepatic diverticulum | 9.41e-08 | 22 |
liver primordium | 9.41e-08 | 22 |
septum transversum | 9.41e-08 | 22 |
liver bud | 9.41e-08 | 22 |
digestive tract diverticulum | 2.65e-07 | 23 |
sac | 2.65e-07 | 23 |