FFCP PHASE1:Mm9::chr3:137940606..137940623,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:137940606..137940623,+ to FFCP PHASE1:Mm9::chr3:137940606..137940623,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11522 | |EntrezGene=11522 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1457 | |||
|TSSclassifier=NA | |||
|UniProt=E0CXV3,P00329,Q3UKA4 | |UniProt=E0CXV3,P00329,Q3UKA4 | ||
|association_with_transcript=0bp_to_ENSMUST00000159159,ENSMUST00000161799,NM_007409,uc008rnf.1_5end | |||
|cluster_id=chr3:137940606..137940623,+ | |||
|description=CAGE_peak_1_at_Adh1_5end | |||
|id=chr3:137940606..137940623,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!7.12e-13!66;UBERON:0001007!2.31e-12!128;UBERON:0001555!2.31e-12!128;UBERON:0007026!2.31e-12!128;UBERON:0004119!4.05e-12!130;UBERON:0000925!4.05e-12!130;UBERON:0006595!4.05e-12!130;UBERON:0004921!2.12e-11!126;UBERON:0004185!2.12e-11!126;UBERON:0005177!1.33e-10!85;UBERON:0000466!4.65e-10!79;UBERON:0005172!1.13e-09!49;UBERON:0005173!1.13e-09!49;UBERON:0002417!1.13e-09!49;UBERON:0000916!1.13e-09!49;UBERON:0005911!6.02e-09!69;UBERON:0009854!4.57e-08!23;UBERON:0009856!4.57e-08!23;UBERON:0002107!6.40e-08!22;UBERON:0007499!6.40e-08!22;UBERON:0006925!6.40e-08!22;UBERON:0009497!6.40e-08!22;UBERON:0000015!6.40e-08!22;UBERON:0002423!6.40e-08!22;UBERON:0006235!6.40e-08!22;UBERON:0008835!6.40e-08!22;UBERON:0003894!6.40e-08!22;UBERON:0004161!6.40e-08!22;UBERON:0008836!6.40e-08!22;UBERON:0002100!7.13e-08!98;UBERON:0002365!1.44e-07!25;UBERON:0002330!1.44e-07!25;UBERON:0005256!1.54e-07!47;UBERON:0000160!2.04e-07!43;UBERON:0005157!2.28e-07!27;UBERON:0000344!3.51e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.30e-12,116;UBERON:0001555,5.30e-12,116;UBERON:0007026,5.30e-12,116;UBERON:0009569,5.56e-12,66;UBERON:0004119,9.71e-12,118;UBERON:0000925,9.71e-12,118;UBERON:0006595,9.71e-12,118;UBERON:0004921,4.96e-11,114;UBERON:0005177,6.00e-11,79;UBERON:0000160,1.02e-09,31;UBERON:0005172,4.35e-09,49;UBERON:0005173,4.35e-09,49;UBERON:0002417,4.35e-09,49;UBERON:0000916,4.35e-09,49;UBERON:0005911,1.24e-08,69;UBERON:0002100,1.45e-08,90;UBERON:0005256,3.08e-08,45;UBERON:0009854,7.59e-08,23;UBERON:0009856,7.59e-08,23;UBERON:0003104,9.12e-08,61;UBERON:0009142,9.12e-08,61;UBERON:0002107,1.08e-07,22;UBERON:0007499,1.08e-07,22;UBERON:0006925,1.08e-07,22;UBERON:0009497,1.08e-07,22;UBERON:0000015,1.08e-07,22;UBERON:0002423,1.08e-07,22;UBERON:0006235,1.08e-07,22;UBERON:0008835,1.08e-07,22;UBERON:0003894,1.08e-07,22;UBERON:0004161,1.08e-07,22;UBERON:0008836,1.08e-07,22;UBERON:0002365,2.30e-07,25;UBERON:0002330,2.30e-07,25;UBERON:0000344,2.48e-07,15 | |||
|phase1_expression=7.04654927261093,449.480325039497,573.299041630815,558.046469861101,463.829445930317,583.884107709553,464.655542144501,0.645616617207881,1.40788722151667,0.70219357896598,1.36974374580404,1.27635454392538,7.01922992717943,9.61624426608971,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,57.0640476913678,0,0,1629.20284130526,1167.92264991296,601.220866428426,1038.56717273953,829.564245840673,27.3633724017178,37.5524893342297,68.5147277924892,0,0,0,196.707953050618,225.580413751474,156.393726896975,0,0,0,0,0,0,19.7658004221656,19.2616169317078,6.24058957349717,0.782391344348039,0,0,0,1.67983705950435,0,0,6.5282592781021,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0.210324961351382,2.85650984403804,5.30084498283872,0,0,0.919218786610021,1.10115880999389,0.255374676170375,0,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.15279824777681,3.83017161115768,3.70166370077668,0.372798891650601,0.605809546665472,0.151143120213571,15.6526823898906,2065.01730475533,1104.95341727509,1836.07025795185,1863.55876523991,1900.0820281798,807.414971337441,3.40860645156115,2.85764605063156,2.47337702157238,0.14084341977668,32.0816193535795,15.2883143823987,0,0.649473123033642,0.253359865475099,0.505524445014783,940.646801125616,17.0899003207133,409.997188097046,688.042805954495,1754.02562055625,1889.43276901889,2305.60423253347,1563.3418613692,1945.06750060072,7.91023896749996,104.834533766936,1.76922110389975,3.72063754879041,11.9254419968613,4.363877278217,74.5567044872489,1.46390398505774,0.83778682725382,261.07711042318,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0.83115217823824,0.324482526135515,41.0412636316775,25.5034289750691,55.5990068554084,196.552693397967,0.650602214813519,2.29902104433473,6.30217454318722,27.1268672104287,12.5187158438443,8.71173297936978,9.65127762965207,72.6956471776634,0.215567992932842,2.64748512234947,1.93546236580344,2.19195732427575,6.95118123063995,42.1385121491822,60.0883838311195,12.5391588095651,0,0,0,0.621377317606506,2.11073453982987,0.540186184383045,9.70653415899362,0.787056926989615,2.1597395804233,2.32533944750408,5.36546802799238,4.2035523252181,1.31647879930784,4.43252153013557,10.5389452409612,13.3041988557052,6.58650345873152,27.780728683397,0.630869845692382,0.411618449517138,653.568352741952,656.895207592244,1.06644125267617,6.0381534683714,49.6139726090059,239.801710777154,219.487129274887,154.272982777285,231.570182033722,87.7845428678978,49.7643713424534,44.1683367931355,35.8733920299181,143.811105384675,234.942060213793,412.22243563654,12.5180814629034,70.6055807928124,24.7957018480777,21.5870407516033,26.7654432291324,38.7851083993462,70.4455023564226,59.7821099317389,65.1544720541705,58.737050026777,4292.33758759483,0.333690211432188,0.982794975566015,3.59779379815766,13.7944882544182,56.676632541818,262.773879038425,755.77775308328,162.459497228585,524.137737776048,238.655222835409,534.022259904302,931.120416573849,2635.15543362222,3306.47372862236,2036.39410367477,70.9452250239762,17.6227012946551,201.261745905902,267.009019924371,376.208468006469,454.611982697088,418.480720677612,108.689441856794,336.708667810824,422.111698470565,266.448918426661,96.5154923675697,144.364644839889,82.4499633914616,0,0,7.86822836830458,21.2471294654644,1.9266070798535,1.17211686592203,0,72.2066851804507,1.57754109708128,0,0,0,0.668396022247182,1.13230612315533,0.809621403349789,1.16902343164525,0,1.60660658210904,169.760341909089,57.6932555881907,48.8660878060728,82.9799718551853,19.9117707509944,0.485561272309963,3.62788268357701,4.90373207365335,6.79194353625777,11.6825356218692,30.2361103006819,8.72480950746013,7.48644494607915,21.4904995396355,4.21674434299995,10.3135543248187,5.10659408630682,0,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,2.63278432963394,19.790221692449,2.3467170806371,4.44847348814022,147.09244150266,14.8397627647332,74.4351007068124,20.3857686257167,14.8021706563889,8.042904087508,153.901881740561,2.78137953015765,0.170870880797853,4.74689796315412,2.59272338317596,0.188368457004691,0.820165366326151,0.915112692826091,0,0.139951452323658,0,65.8722726430428,0.474503990371703,6.91286188231286,24.1931963440835,18.3997700492732,54.5906409365444,38.1666100269043,70.4207442779862,49.7336289769656,35.2552727353677,34.7950015328678,9.01908701894705,58.6104860492397,75.1181546675223,97.0311429836798,167.520291050617,199.199271953627,134.960824442617,36.7176365259939,18.140666585648,7.48910774560619,8.64090018773596,2.21207784439725,0.202725215290164,1.1298205288131,1.81889152168913,2.14832034800978,1.98681354781265,1.68273629327956,1.62458479892035,1.61546319917036,0.762068066549998,1.00826185136841,1.26695244961678,1.25075394132428,1.98690733708667,15.8711268530648,0,0,0,288.43206389006,36.2227177620781,170.697313817091,61.738093174771,196.616264781862,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,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|phase1_expression=7.04654927261093,449.480325039497,573.299041630815,558.046469861101,463.829445930317,583.884107709553,464.655542144501,0.645616617207881,1.40788722151667,0.70219357896598,1.36974374580404,1.27635454392538,7.01922992717943,9.61624426608971,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,57.0640476913678,0,0,1629.20284130526,1167.92264991296,601.220866428426,1038.56717273953,829.564245840673,27.3633724017178,37.5524893342297,68.5147277924892,0,0,0,196.707953050618,225.580413751474,156.393726896975,0,0,0,0,0,0,19.7658004221656,19.2616169317078,6.24058957349717,0.782391344348039,0,0,0,1.67983705950435,0,0,6.5282592781021,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0.210324961351382,2.85650984403804,5.30084498283872,0,0,0.919218786610021,1.10115880999389,0.255374676170375,0,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.15279824777681,3.83017161115768,3.70166370077668,0.372798891650601,0.605809546665472,0.151143120213571,15.6526823898906,2065.01730475533,1104.95341727509,1836.07025795185,1863.55876523991,1900.0820281798,807.414971337441,3.40860645156115,2.85764605063156,2.47337702157238,0.14084341977668,32.0816193535795,15.2883143823987,0,0.649473123033642,0.253359865475099,0.505524445014783,940.646801125616,17.0899003207133,409.997188097046,688.042805954495,1754.02562055625,1889.43276901889,2305.60423253347,1563.3418613692,1945.06750060072,7.91023896749996,104.834533766936,1.76922110389975,3.72063754879041,11.9254419968613,4.363877278217,74.5567044872489,1.46390398505774,0.83778682725382,261.07711042318,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0.83115217823824,0.324482526135515,41.0412636316775,25.5034289750691,55.5990068554084,196.552693397967,0.650602214813519,2.29902104433473,6.30217454318722,27.1268672104287,12.5187158438443,8.71173297936978,9.65127762965207,72.6956471776634,0.215567992932842,2.64748512234947,1.93546236580344,2.19195732427575,6.95118123063995,42.1385121491822,60.0883838311195,12.5391588095651,0,0,0,0.621377317606506,2.11073453982987,0.540186184383045,9.70653415899362,0.787056926989615,2.1597395804233,2.32533944750408,5.36546802799238,4.2035523252181,1.31647879930784,4.43252153013557,10.5389452409612,13.3041988557052,6.58650345873152,27.780728683397,0.630869845692382,0.411618449517138,653.568352741952,656.895207592244,1.06644125267617,6.0381534683714,49.6139726090059,239.801710777154,219.487129274887,154.272982777285,231.570182033722,87.7845428678978,49.7643713424534,44.1683367931355,35.8733920299181,143.811105384675,234.942060213793,412.22243563654,12.5180814629034,70.6055807928124,24.7957018480777,21.5870407516033,26.7654432291324,38.7851083993462,70.4455023564226,59.7821099317389,65.1544720541705,58.737050026777,4292.33758759483,0.333690211432188,0.982794975566015,3.59779379815766,13.7944882544182,56.676632541818,262.773879038425,755.77775308328,162.459497228585,524.137737776048,238.655222835409,534.022259904302,931.120416573849,2635.15543362222,3306.47372862236,2036.39410367477,70.9452250239762,17.6227012946551,201.261745905902,267.009019924371,376.208468006469,454.611982697088,418.480720677612,108.689441856794,336.708667810824,422.111698470565,266.448918426661,96.5154923675697,144.364644839889,82.4499633914616,0,0,7.86822836830458,21.2471294654644,1.9266070798535,1.17211686592203,0,72.2066851804507,1.57754109708128,0,0,0,0.668396022247182,1.13230612315533,0.809621403349789,1.16902343164525,0,1.60660658210904,169.760341909089,57.6932555881907,48.8660878060728,82.9799718551853,19.9117707509944,0.485561272309963,3.62788268357701,4.90373207365335,6.79194353625777,11.6825356218692,30.2361103006819,8.72480950746013,7.48644494607915,21.4904995396355,4.21674434299995,10.3135543248187,5.10659408630682,0,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,2.63278432963394,19.790221692449,2.3467170806371,4.44847348814022,147.09244150266,14.8397627647332,74.4351007068124,20.3857686257167,14.8021706563889,8.042904087508,153.901881740561,2.78137953015765,0.170870880797853,4.74689796315412,2.59272338317596,0.188368457004691,0.820165366326151,0.915112692826091,0,0.139951452323658,0,65.8722726430428,0.474503990371703,6.91286188231286,24.1931963440835,18.3997700492732,54.5906409365444,38.1666100269043,70.4207442779862,49.7336289769656,35.2552727353677,34.7950015328678,9.01908701894705,58.6104860492397,75.1181546675223,97.0311429836798,167.520291050617,199.199271953627,134.960824442617,36.7176365259939,18.140666585648,7.48910774560619,8.64090018773596,2.21207784439725,0.202725215290164,1.1298205288131,1.81889152168913,2.14832034800978,1.98681354781265,1.68273629327956,1.62458479892035,1.61546319917036,0.762068066549998,1.00826185136841,1.26695244961678,1.25075394132428,1.98690733708667,15.8711268530648,0,0,0,288.43206389006,36.2227177620781,170.697313817091,61.738093174771,196.616264781862,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,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| ||
|short_description=p1@Adh1 | |||
}} | }} |
Latest revision as of 16:45, 1 October 2015
Short description: | p1@Adh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1457 |
Association with transcript: | 0bp_to_ENSMUST00000159159, ENSMUST00000161799, NM_007409, uc008rnf.1_5end |
EntrezGene: | Adh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 5.30e-12 | 116 |
digestive tract | 5.30e-12 | 116 |
primitive gut | 5.30e-12 | 116 |
subdivision of trunk | 5.56e-12 | 66 |
endoderm-derived structure | 9.71e-12 | 118 |
endoderm | 9.71e-12 | 118 |
presumptive endoderm | 9.71e-12 | 118 |
subdivision of digestive tract | 4.96e-11 | 114 |
trunk region element | 6.00e-11 | 79 |
intestine | 1.02e-09 | 31 |
abdomen element | 4.35e-09 | 49 |
abdominal segment element | 4.35e-09 | 49 |
abdominal segment of trunk | 4.35e-09 | 49 |
abdomen | 4.35e-09 | 49 |
endo-epithelium | 1.24e-08 | 69 |
trunk | 1.45e-08 | 90 |
trunk mesenchyme | 3.08e-08 | 45 |
digestive tract diverticulum | 7.59e-08 | 23 |
sac | 7.59e-08 | 23 |
mesenchyme | 9.12e-08 | 61 |
entire embryonic mesenchyme | 9.12e-08 | 61 |
liver | 1.08e-07 | 22 |
epithelial sac | 1.08e-07 | 22 |
digestive gland | 1.08e-07 | 22 |
epithelium of foregut-midgut junction | 1.08e-07 | 22 |
anatomical boundary | 1.08e-07 | 22 |
hepatobiliary system | 1.08e-07 | 22 |
foregut-midgut junction | 1.08e-07 | 22 |
hepatic diverticulum | 1.08e-07 | 22 |
liver primordium | 1.08e-07 | 22 |
septum transversum | 1.08e-07 | 22 |
liver bud | 1.08e-07 | 22 |
exocrine gland | 2.30e-07 | 25 |
exocrine system | 2.30e-07 | 25 |
mucosa | 2.48e-07 | 15 |