FFCP PHASE1:Mm9::chr5:3270374..3270385,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:3270374..3270385,+ to FFCP PHASE1:Mm9::chr5:3270374..3270385,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:3270374..3270385,+ | |||
|description=CAGE_peak_at_chr5:3270374..3270385,+ | |||
|id=chr5:3270374..3270385,+ | |||
|ontology_enrichment_celltype=CL:0002250!1.90e-17!3;CL:0002563!5.12e-10!9;CL:0002251!5.12e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.33e-65,3;CL:0002563,1.19e-22,9;CL:0002251,1.19e-22,9;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.19e-17!15;UBERON:0001242!1.06e-14!13;UBERON:0000060!1.06e-14!13;UBERON:0001262!1.06e-14!13;UBERON:0004786!1.06e-14!13;UBERON:0000160!4.12e-11!43;UBERON:0004923!2.71e-10!24;UBERON:0003350!5.12e-10!9;UBERON:0004808!5.12e-10!9;UBERON:0001277!5.12e-10!9;UBERON:0005409!1.77e-09!59;UBERON:0000485!3.21e-08!11;UBERON:0000331!5.01e-08!3;UBERON:0002116!5.01e-08!3;UBERON:0001204!5.01e-08!3;UBERON:0001168!5.01e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.19e-22,9;UBERON:0004808,1.19e-22,9;UBERON:0001277,1.19e-22,9;UBERON:0000485,1.00e-18,11;UBERON:0001242,5.32e-16,13;UBERON:0001262,5.32e-16,13;UBERON:0004786,5.32e-16,13;UBERON:0000344,5.35e-14,15;UBERON:0004923,4.35e-09,24;UBERON:0005409,3.12e-08,47;UBERON:0000160,3.20e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,7.22129049378186,6.81562045969819,8.16677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,7.22129049378186,6.81562045969819,8.16677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:3270374..3270385,+ | |||
}} | }} |
Latest revision as of 07:40, 4 August 2015
Short description: | p@chr5:3270374..3270385, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:3270374..3270385, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.33e-65 | 3 |
intestinal epithelial cell | 1.19e-22 | 9 |
epithelial cell of alimentary canal | 1.19e-22 | 9 |
endo-epithelial cell | 5.35e-14 | 15 |
endodermal cell | 9.91e-11 | 20 |
epithelial cell | 9.29e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.19e-22 | 9 |
gastrointestinal system epithelium | 1.19e-22 | 9 |
intestinal epithelium | 1.19e-22 | 9 |
simple columnar epithelium | 1.00e-18 | 11 |
intestinal mucosa | 5.32e-16 | 13 |
wall of intestine | 5.32e-16 | 13 |
gastrointestinal system mucosa | 5.32e-16 | 13 |
mucosa | 5.35e-14 | 15 |
organ component layer | 4.35e-09 | 24 |
gastrointestinal system | 3.12e-08 | 47 |
intestine | 3.20e-07 | 31 |