FFCP PHASE1:Mm9::chr9:31019390..31019409,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:31019390..31019409,- to FFCP PHASE1:Mm9::chr9:31019390..31019409,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11804 | |EntrezGene=11804 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q61482,Q60709,Q06335,E9PUY3,E9Q2B5,Q3TPZ7,Q3UDL6,Q64348,Q9CYS4 | |UniProt=Q61482,Q60709,Q06335,E9PUY3,E9Q2B5,Q3TPZ7,Q3UDL6,Q64348,Q9CYS4 | ||
|association_with_transcript=0bp_to_ENSMUST00000071125,ENSMUST00000072634,ENSMUST00000079758,ENSMUST00000166733,ENSMUST00000170340,NM_001102455,NM_001102456,NM_009691,uc009orl.1,uc009orm.1,uc009orn.1,uc012gpu.1_5end | |||
|cluster_id=chr9:31019390..31019409,- | |||
|description=CAGE_peak_1_at_Aplp2_5end | |||
|id=chr9:31019390..31019409,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.39e-16!122;UBERON:0000025!3.02e-16!114;UBERON:0000483!1.32e-11!181;UBERON:0000062!1.48e-11!269;UBERON:0000119!8.52e-11!183;UBERON:0000480!2.49e-09!308;UBERON:0000467!2.49e-09!308;UBERON:0000477!7.44e-09!154;UBERON:0009569!1.01e-07!66;UBERON:0003914!1.72e-07!47;UBERON:0002100!2.11e-07!98;UBERON:0005177!2.26e-07!85;UBERON:0004121!3.50e-07!102;UBERON:0000924!3.50e-07!102;UBERON:0006601!3.50e-07!102;UBERON:0000475!4.42e-07!200;UBERON:0000923!9.72e-07!314;UBERON:0005291!9.72e-07!314;UBERON:0006598!9.72e-07!314;UBERON:0002532!9.72e-07!314 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.39e-16,122;UBERON:0000025,3.02e-16,114;UBERON:0000483,6.56e-10,174;UBERON:0000119,3.64e-09,176;UBERON:0010314,2.03e-08,92;UBERON:0009569,1.01e-07,66;UBERON:0005423,1.15e-07,304;UBERON:0003914,1.72e-07,47;UBERON:0000923,5.10e-07,291;UBERON:0010316,5.10e-07,291;UBERON:0005291,5.10e-07,291;UBERON:0006598,5.10e-07,291;UBERON:0010317,5.10e-07,291;UBERON:0002532,5.10e-07,291 | |||
|phase1_expression=197.143230786001,301.165776792769,323.50445920596,212.329876337395,201.860979168378,134.974934617159,137.597845310765,40.8029702075381,146.701848482037,132.012392845604,32.0177600581694,26.564128945447,25.8513102196121,29.3732552127831,101.265367591961,93.5435735340996,125.221576184938,23.9751245672261,23.8579114473985,24.1902101524877,191.262359549756,12.113496046508,11.7539905112521,157.432544028712,172.286370081445,263.572471528794,220.550142033446,191.122983392384,107.93330225122,126.015064879965,110.643524816997,24.131165591466,22.1423323530445,47.5445043046316,68.1689822613008,58.5145951661893,70.4384279105173,19.6709866446347,30.4720784364282,24.0820922227947,23.5292595212406,23.9065919735456,22.3334762394331,278.987348633879,244.41978117025,131.052381043441,107.187614175681,101.817748029669,304.045676904509,196.957487762249,109.749354554284,143.752564364972,23.3217822420254,54.4021606508508,27.559691529682,203.74947334047,283.954638979308,267.118143799715,100.75359750808,126.428844046016,102.680687368001,50.4878352783007,56.9148669511129,137.684656744054,126.574894408573,138.54362241449,110.252840670773,106.428470574071,79.8410014775278,69.1230404258256,83.70933461785,280.223615700131,284.478680745678,67.1249579697948,64.6956929373095,51.4762520501612,328.145325378178,393.404688640463,371.881417013365,109.465618816061,115.182943295434,100.536280517455,335.857147798661,280.255779795777,298.109381412557,242.773954430302,261.963892670349,202.243398720451,122.373528426425,174.494732286568,397.983942987404,219.408088630254,220.310712121311,272.01040858546,423.004447758433,409.496574806965,153.786640044268,203.152944513045,157.430318789338,158.649468955143,227.180436099786,173.240744509329,224.228610941848,248.873346103666,241.171019686493,269.574896865505,226.980475811638,185.662988423192,85.1905637199195,253.390731383656,116.582139586843,144.012171241643,211.935641978318,195.637987437304,268.807784512221,413.945751839951,132.002112770156,611.655279771226,76.9611180196391,124.560474459505,121.683676671677,114.915434993048,145.385573750135,286.925181071316,426.852388485821,97.3291380344733,19.8893106679828,10.1983464268879,18.6793233797405,255.692621464032,220.972791161397,125.528697760752,217.106575920153,318.877175290922,264.30639267976,309.394088670214,145.630290305952,156.877189939327,74.0477682210667,286.200924005605,71.6963640724497,78.6265197162477,100.114544171774,106.246896574179,147.843312655835,153.73646434182,173.910400782857,330.881611175201,49.7962063674866,51.8150659659825,58.0638709741031,58.9636520230176,68.9557178079483,88.4560502966303,90.7499221559031,91.1576942028699,7.72434506044558,9.26452465612975,15.344828967362,108.533904808603,102.253362151758,122.802325916412,146.544991327245,131.241742575518,142.697079420825,136.72995951324,167.134329071963,229.210367066754,197.14270019635,219.656066937829,238.26123125527,222.808780836206,247.652530048305,290.691103034965,198.093131547408,143.449029656723,181.730330641089,69.0215978991851,59.7207101498655,63.8650847616206,72.8101156469827,71.5976512412866,66.4910351096162,82.3676961067381,119.581323509217,104.913234159195,123.656922729733,133.300836267571,129.456153847096,123.138258985628,112.391785934841,139.398891278057,79.4708504993412,100.995685147,116.088967743273,97.3453347100602,107.8375828652,180.108785478338,233.026639302888,245.623286238058,274.433776266723,306.888746673518,230.343691246715,92.7658787781483,87.2721938302621,115.579125765815,122.527513318656,121.312111355466,120.692653744393,135.217184601881,139.922700706856,169.678953350234,260.220453814512,286.176388757079,265.856097493606,278.847081253611,264.61118494482,344.947117774808,286.73695113857,72.5752107080957,114.401413462302,117.293854270655,134.242822021023,171.693913877861,201.622963830454,332.312602301831,281.221097085445,292.333390336383,329.911916352341,309.210074868598,340.534784239546,345.277302834068,248.805618499799,122.922684543028,134.251646534197,156.456135154783,282.08738660855,364.645556988344,78.6887737808042,226.466421702323,91.8128918501307,113.227235846025,121.283372923566,80.0545473141049,84.6634961513098,82.6583469903391,97.9641898053244,116.902343164525,123.725074497262,245.810807062682,245.414407325096,130.344021884431,133.89308058864,149.62790153609,58.4078608695836,89.5860547411881,98.8598031274736,88.2671773257603,102.469756829628,109.139477520094,122.495010961737,126.509737858172,125.843574569807,94.494990622809,113.852097260999,91.7906334908863,98.3870460628447,69.1434601080231,77.48585158587,106.954180480765,110.660305792779,132.528031478338,136.411138079158,140.662806490945,93.6340115174204,213.526727430731,116.659522571075,235.787341706316,170.183505737484,249.936760902278,322.544073496475,386.551818899619,134.955627359621,326.163106236486,69.544448484726,117.846901607,120.006053735573,142.783290409556,118.923978117292,103.865290635761,68.3313288575298,58.3597556189654,54.5889896527474,184.251429276917,79.7166703824461,97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| |phase1_expression=197.143230786001,301.165776792769,323.50445920596,212.329876337395,201.860979168378,134.974934617159,137.597845310765,40.8029702075381,146.701848482037,132.012392845604,32.0177600581694,26.564128945447,25.8513102196121,29.3732552127831,101.265367591961,93.5435735340996,125.221576184938,23.9751245672261,23.8579114473985,24.1902101524877,191.262359549756,12.113496046508,11.7539905112521,157.432544028712,172.286370081445,263.572471528794,220.550142033446,191.122983392384,107.93330225122,126.015064879965,110.643524816997,24.131165591466,22.1423323530445,47.5445043046316,68.1689822613008,58.5145951661893,70.4384279105173,19.6709866446347,30.4720784364282,24.0820922227947,23.5292595212406,23.9065919735456,22.3334762394331,278.987348633879,244.41978117025,131.052381043441,107.187614175681,101.817748029669,304.045676904509,196.957487762249,109.749354554284,143.752564364972,23.3217822420254,54.4021606508508,27.559691529682,203.74947334047,283.954638979308,267.118143799715,100.75359750808,126.428844046016,102.680687368001,50.4878352783007,56.9148669511129,137.684656744054,126.574894408573,138.54362241449,110.252840670773,106.428470574071,79.8410014775278,69.1230404258256,83.70933461785,280.223615700131,284.478680745678,67.1249579697948,64.6956929373095,51.4762520501612,328.145325378178,393.404688640463,371.881417013365,109.465618816061,115.182943295434,100.536280517455,335.857147798661,280.255779795777,298.109381412557,242.773954430302,261.963892670349,202.243398720451,122.373528426425,174.494732286568,397.983942987404,219.408088630254,220.310712121311,272.01040858546,423.004447758433,409.496574806965,153.786640044268,203.152944513045,157.430318789338,158.649468955143,227.180436099786,173.240744509329,224.228610941848,248.873346103666,241.171019686493,269.574896865505,226.980475811638,185.662988423192,85.1905637199195,253.390731383656,116.582139586843,144.012171241643,211.935641978318,195.637987437304,268.807784512221,413.945751839951,132.002112770156,611.655279771226,76.9611180196391,124.560474459505,121.683676671677,114.915434993048,145.385573750135,286.925181071316,426.852388485821,97.3291380344733,19.8893106679828,10.1983464268879,18.6793233797405,255.692621464032,220.972791161397,125.528697760752,217.106575920153,318.877175290922,264.30639267976,309.394088670214,145.630290305952,156.877189939327,74.0477682210667,286.200924005605,71.6963640724497,78.6265197162477,100.114544171774,106.246896574179,147.843312655835,153.73646434182,173.910400782857,330.881611175201,49.7962063674866,51.8150659659825,58.0638709741031,58.9636520230176,68.9557178079483,88.4560502966303,90.7499221559031,91.1576942028699,7.72434506044558,9.26452465612975,15.344828967362,108.533904808603,102.253362151758,122.802325916412,146.544991327245,131.241742575518,142.697079420825,136.72995951324,167.134329071963,229.210367066754,197.14270019635,219.656066937829,238.26123125527,222.808780836206,247.652530048305,290.691103034965,198.093131547408,143.449029656723,181.730330641089,69.0215978991851,59.7207101498655,63.8650847616206,72.8101156469827,71.5976512412866,66.4910351096162,82.3676961067381,119.581323509217,104.913234159195,123.656922729733,133.300836267571,129.456153847096,123.138258985628,112.391785934841,139.398891278057,79.4708504993412,100.995685147,116.088967743273,97.3453347100602,107.8375828652,180.108785478338,233.026639302888,245.623286238058,274.433776266723,306.888746673518,230.343691246715,92.7658787781483,87.2721938302621,115.579125765815,122.527513318656,121.312111355466,120.692653744393,135.217184601881,139.922700706856,169.678953350234,260.220453814512,286.176388757079,265.856097493606,278.847081253611,264.61118494482,344.947117774808,286.73695113857,72.5752107080957,114.401413462302,117.293854270655,134.242822021023,171.693913877861,201.622963830454,332.312602301831,281.221097085445,292.333390336383,329.911916352341,309.210074868598,340.534784239546,345.277302834068,248.805618499799,122.922684543028,134.251646534197,156.456135154783,282.08738660855,364.645556988344,78.6887737808042,226.466421702323,91.8128918501307,113.227235846025,121.283372923566,80.0545473141049,84.6634961513098,82.6583469903391,97.9641898053244,116.902343164525,123.725074497262,245.810807062682,245.414407325096,130.344021884431,133.89308058864,149.62790153609,58.4078608695836,89.5860547411881,98.8598031274736,88.2671773257603,102.469756829628,109.139477520094,122.495010961737,126.509737858172,125.843574569807,94.494990622809,113.852097260999,91.7906334908863,98.3870460628447,69.1434601080231,77.48585158587,106.954180480765,110.660305792779,132.528031478338,136.411138079158,140.662806490945,93.6340115174204,213.526727430731,116.659522571075,235.787341706316,170.183505737484,249.936760902278,322.544073496475,386.551818899619,134.955627359621,326.163106236486,69.544448484726,117.846901607,120.006053735573,142.783290409556,118.923978117292,103.865290635761,68.3313288575298,58.3597556189654,54.5889896527474,184.251429276917,79.7166703824461,97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| ||
|short_description=p1@Aplp2 | |||
}} | }} |
Latest revision as of 13:22, 26 September 2015
Short description: | p1@Aplp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aplp2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000071125, ENSMUST00000072634, ENSMUST00000079758, ENSMUST00000166733, ENSMUST00000170340, NM_001102455, NM_001102456, NM_009691, uc009orl.1, uc009orm.1, uc009orn.1, uc012gpu.1_5end |
EntrezGene: | Aplp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.39e-16 | 122 |
tube | 3.02e-16 | 114 |
epithelium | 6.56e-10 | 174 |
cell layer | 3.64e-09 | 176 |
structure with developmental contribution from neural crest | 2.03e-08 | 92 |
subdivision of trunk | 1.01e-07 | 66 |
developing anatomical structure | 1.15e-07 | 304 |
epithelial tube | 1.72e-07 | 47 |
germ layer | 5.10e-07 | 291 |
germ layer / neural crest | 5.10e-07 | 291 |
embryonic tissue | 5.10e-07 | 291 |
presumptive structure | 5.10e-07 | 291 |
germ layer / neural crest derived structure | 5.10e-07 | 291 |
epiblast (generic) | 5.10e-07 | 291 |