FFCP PHASE1:Mm9::chr9:77899745..77899755,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14531 | |EntrezGene=14531 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=P70348,Q3UQD1 | |UniProt=P70348,Q3UQD1 | ||
|association_with_transcript=-9bp_to_ENSMUST00000024104,NM_008103,uc009qto.1_5end | |||
|cluster_id=chr9:77899745..77899755,+ | |||
|description=CAGE_peak_1_at_Gcm1_5end | |||
|id=chr9:77899745..77899755,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!5.37e-20!14;UBERON:0003918!5.37e-20!14;UBERON:0005095!5.37e-20!14;UBERON:0007687!5.37e-20!14;UBERON:0006554!2.26e-17!16;UBERON:0001008!2.72e-16!17;UBERON:0000489!5.40e-13!21;UBERON:0001987!1.07e-10!2;UBERON:0003124!1.07e-10!2;UBERON:0004340!1.07e-10!2;UBERON:0005631!2.12e-07!3;UBERON:0000478!2.12e-07!3;UBERON:0000158!2.12e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.43e-30,2;UBERON:0003124,2.43e-30,2;UBERON:0004340,2.43e-30,2;UBERON:0006554,1.05e-20,18;UBERON:0005631,1.27e-20,3;UBERON:0000478,1.27e-20,3;UBERON:0000158,1.27e-20,3;UBERON:0001008,1.21e-19,19;UBERON:0005795,9.55e-16,4;UBERON:0000995,9.55e-16,4;UBERON:0003975,8.26e-13,5;UBERON:0002113,4.39e-10,14;UBERON:0003918,4.39e-10,14;UBERON:0011143,4.39e-10,14;UBERON:0005095,4.39e-10,14;UBERON:0007687,4.39e-10,14;UBERON:0003134,2.25e-08,8;UBERON:0004175,1.51e-07,9;UBERON:0000474,1.51e-07,9;UBERON:0000489,5.98e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.350679099451593,1.83385957660346,2.21415221969403,1.41298855057237,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,9.32061111800809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,1.33191572024439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.350679099451593,1.83385957660346,2.21415221969403,1.41298855057237,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,9.32061111800809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,1.33191572024439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Gcm1 | |||
}} | }} |
Latest revision as of 04:10, 27 September 2015
Short description: | p1@Gcm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gcm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | -9bp_to_ENSMUST00000024104, NM_008103, uc009qto.1_5end |
EntrezGene: | Gcm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 2.43e-30 | 2 |
chorion | 2.43e-30 | 2 |
allantois | 2.43e-30 | 2 |
urinary system structure | 1.05e-20 | 18 |
extraembryonic membrane | 1.27e-20 | 3 |
extraembryonic structure | 1.27e-20 | 3 |
membranous layer | 1.27e-20 | 3 |
renal system | 1.21e-19 | 19 |
embryonic uterus | 9.55e-16 | 4 |
uterus | 9.55e-16 | 4 |
internal female genitalia | 8.26e-13 | 5 |
kidney | 4.39e-10 | 14 |
kidney mesenchyme | 4.39e-10 | 14 |
upper urinary tract | 4.39e-10 | 14 |
kidney rudiment | 4.39e-10 | 14 |
kidney field | 4.39e-10 | 14 |
female reproductive organ | 2.25e-08 | 8 |
internal genitalia | 1.51e-07 | 9 |
female reproductive system | 1.51e-07 | 9 |
cavitated compound organ | 5.98e-07 | 21 |