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FFCP PHASE1:Mm9::chr12:8777846..8777868,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20969
|EntrezGene=20969
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=P18828
|UniProt=P18828
|association_with_transcript=-260bp_to_ENSMUST00000020911_5end
|association_with_transcript=-260bp_to_ENSMUST00000020911_5end
|cluster_id=chr12:8777846..8777868,+
|description=CAGE_peak_6_at_Sdc1_5end
|description=CAGE_peak_6_at_Sdc1_5end
|id=chr12:8777846..8777868,+
|id=chr12:8777846..8777868,+
|ontology_enrichment_celltype=CL:0000066!6.46e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000239,2.61e-09,6;CL:0000677,2.61e-09,6;CL:0000584,2.61e-09,6;CL:0000066,1.82e-08,25;CL:0000075,7.92e-08,7;CL:0002563,1.59e-07,9;CL:0002251,1.59e-07,9;CL:0000223,8.92e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!6.03e-12!128;UBERON:0001555!6.03e-12!128;UBERON:0007026!6.03e-12!128;UBERON:0004119!1.62e-11!130;UBERON:0000925!1.62e-11!130;UBERON:0006595!1.62e-11!130;UBERON:0004921!5.10e-11!126;UBERON:0004185!5.10e-11!126;UBERON:0000160!1.19e-09!43;UBERON:0000344!2.99e-09!15;UBERON:0009854!9.24e-09!23;UBERON:0009856!9.24e-09!23;UBERON:0002365!1.68e-08!25;UBERON:0002330!1.68e-08!25;UBERON:0002107!2.98e-08!22;UBERON:0007499!2.98e-08!22;UBERON:0006925!2.98e-08!22;UBERON:0009497!2.98e-08!22;UBERON:0000015!2.98e-08!22;UBERON:0002423!2.98e-08!22;UBERON:0006235!2.98e-08!22;UBERON:0008835!2.98e-08!22;UBERON:0003894!2.98e-08!22;UBERON:0004161!2.98e-08!22;UBERON:0008836!2.98e-08!22;UBERON:0001242!4.67e-08!13;UBERON:0000060!4.67e-08!13;UBERON:0001262!4.67e-08!13;UBERON:0004786!4.67e-08!13;UBERON:0005409!1.45e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.25e-25,31;UBERON:0001007,1.32e-22,116;UBERON:0001555,1.32e-22,116;UBERON:0007026,1.32e-22,116;UBERON:0004119,5.47e-22,118;UBERON:0000925,5.47e-22,118;UBERON:0006595,5.47e-22,118;UBERON:0005409,6.19e-22,47;UBERON:0004921,1.27e-20,114;UBERON:0000344,2.15e-15,15;UBERON:0001242,7.53e-13,13;UBERON:0001262,7.53e-13,13;UBERON:0004786,7.53e-13,13;UBERON:0009854,1.38e-10,23;UBERON:0009856,1.38e-10,23;UBERON:0002107,1.26e-09,22;UBERON:0007499,1.26e-09,22;UBERON:0006925,1.26e-09,22;UBERON:0009497,1.26e-09,22;UBERON:0000015,1.26e-09,22;UBERON:0002423,1.26e-09,22;UBERON:0006235,1.26e-09,22;UBERON:0008835,1.26e-09,22;UBERON:0003894,1.26e-09,22;UBERON:0004161,1.26e-09,22;UBERON:0008836,1.26e-09,22;UBERON:0011216,1.78e-08,194;UBERON:0004923,2.86e-08,24;UBERON:0002365,4.74e-08,25;UBERON:0002330,4.74e-08,25;UBERON:0003350,1.59e-07,9;UBERON:0004808,1.59e-07,9;UBERON:0001277,1.59e-07,9;UBERON:0002108,2.86e-07,4;UBERON:0003929,3.33e-07,55
|phase1_expression=0.80074423552397,3.48975407639361,5.45999087267443,13.3084252975005,9.5170188689806,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0.510259740906419,0,0,2.87986361028132,2.75291137280604,2.8711598205751,3.01533397311352,1.29282739611533,8.17100703662408,8.06496415231778,1.77384408524244,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,2.34717403304412,0.436050312760893,0,0.58328969722285,0.839918529752175,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0.633831403506179,0,0.889294796111139,1.3498495759221,0.988866362566974,2.1314403448383,0,0.768436610643109,0,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0.395658863190582,0.548925861614458,0,0,0,0.30559649555362,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0.289864488701678,1.72084775396277,2.719885334831,3.2382191498269,1.29955283489534,1.34408066129201,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0.823120949949934,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,3.83185582812887,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.124406970610093,0,1.68353484709179,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.384341160854549,0,0.776110112217047,0,0,0,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.116765342367169,0.493679549740441,0,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0,0,4.62586296177317,0.793351699990633,0,0,0.38660238396628,1.00841762311671,1.77902435075896,1.14135375667535,6.64340686162316,4.77626968699632,2.5133520880027,3.18330355265841,2.53453313254856,3.59527763461689,2.37751854862164,2.78797782556114,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.505892296994058,0.590440591918409,0.156998727841375,0.863780147452604,1.1858105083486,0.166845105716094,0.196558995113203,0.674586337154561,0.608580364165509,0.482354319504834,0.25462585178142,0.863088412352432,1.62135226775035,1.37280706594041,4.31304619582064,1.11642284300551,3.43241440426017,2.52578877947112,1.97337154874103,3.37710464954357,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.952174563544055,1.17080188714679,0.315270288212382,1.32878813789265,1.11618338060241,0,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.488660878060728,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0,0,0,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.658196082408484,1.2178597964584,0,0.21183207086382,1.7642271844397,0,0.161464426695906,0.120625849856312,0,0.656563598980245,6.12109756922687,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,0,0.324016022465404,0,0.436725127492355,1.21377911746339,1.48776220305605,1.30877970992015,2.59229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.269141569828427,0.167884616364078,1.73870634628971,0,0.36630324853453,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.0640251524048693,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0,0.593175090620871,0.197008964751127,1.22769312950907,0.619747364743864,0,0,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0
|phase1_expression=0.80074423552397,3.48975407639361,5.45999087267443,13.3084252975005,9.5170188689806,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0.510259740906419,0,0,2.87986361028132,2.75291137280604,2.8711598205751,3.01533397311352,1.29282739611533,8.17100703662408,8.06496415231778,1.77384408524244,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,2.34717403304412,0.436050312760893,0,0.58328969722285,0.839918529752175,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0.633831403506179,0,0.889294796111139,1.3498495759221,0.988866362566974,2.1314403448383,0,0.768436610643109,0,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0.395658863190582,0.548925861614458,0,0,0,0.30559649555362,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0.289864488701678,1.72084775396277,2.719885334831,3.2382191498269,1.29955283489534,1.34408066129201,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0.823120949949934,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,3.83185582812887,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.124406970610093,0,1.68353484709179,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.384341160854549,0,0.776110112217047,0,0,0,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.116765342367169,0.493679549740441,0,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0,0,4.62586296177317,0.793351699990633,0,0,0.38660238396628,1.00841762311671,1.77902435075896,1.14135375667535,6.64340686162316,4.77626968699632,2.5133520880027,3.18330355265841,2.53453313254856,3.59527763461689,2.37751854862164,2.78797782556114,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.505892296994058,0.590440591918409,0.156998727841375,0.863780147452604,1.1858105083486,0.166845105716094,0.196558995113203,0.674586337154561,0.608580364165509,0.482354319504834,0.25462585178142,0.863088412352432,1.62135226775035,1.37280706594041,4.31304619582064,1.11642284300551,3.43241440426017,2.52578877947112,1.97337154874103,3.37710464954357,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.952174563544055,1.17080188714679,0.315270288212382,1.32878813789265,1.11618338060241,0,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.488660878060728,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0,0,0,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.658196082408484,1.2178597964584,0,0.21183207086382,1.7642271844397,0,0.161464426695906,0.120625849856312,0,0.656563598980245,6.12109756922687,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,0,0.324016022465404,0,0.436725127492355,1.21377911746339,1.48776220305605,1.30877970992015,2.59229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.269141569828427,0.167884616364078,1.73870634628971,0,0.36630324853453,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.0640251524048693,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0,0.593175090620871,0.197008964751127,1.22769312950907,0.619747364743864,0,0,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0
|short_description=p6@Sdc1
|short_description=p6@Sdc1
}}
}}

Latest revision as of 23:08, 26 September 2015

Short description:p6@Sdc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Sdc1_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -260bp_to_ENSMUST00000020911_5end
EntrezGene:Sdc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Sdc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.25e-2531
digestive system1.32e-22116
digestive tract1.32e-22116
primitive gut1.32e-22116
endoderm-derived structure5.47e-22118
endoderm5.47e-22118
presumptive endoderm5.47e-22118
gastrointestinal system6.19e-2247
subdivision of digestive tract1.27e-20114
mucosa2.15e-1515
intestinal mucosa7.53e-1313
wall of intestine7.53e-1313
gastrointestinal system mucosa7.53e-1313
digestive tract diverticulum1.38e-1023
sac1.38e-1023
liver1.26e-0922
epithelial sac1.26e-0922
digestive gland1.26e-0922
epithelium of foregut-midgut junction1.26e-0922
anatomical boundary1.26e-0922
hepatobiliary system1.26e-0922
foregut-midgut junction1.26e-0922
hepatic diverticulum1.26e-0922
liver primordium1.26e-0922
septum transversum1.26e-0922
liver bud1.26e-0922
organ system subdivision1.78e-08194
organ component layer2.86e-0824
exocrine gland4.74e-0825
exocrine system4.74e-0825
epithelium of mucosa1.59e-079
gastrointestinal system epithelium1.59e-079
intestinal epithelium1.59e-079
small intestine2.86e-074
gut epithelium3.33e-0755
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