FFCP PHASE1:Hg19::chr10:105495808..105495820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105495808..105495820,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr10:105495808..105495820,- | |description=CAGE_peak_at_chr10:105495808..105495820,- | ||
|id=chr10:105495808..105495820,- | |id=chr10:105495808..105495820,- | ||
|ontology_enrichment_celltype=CL:0002076!6.79e-20!43;CL:0002621!4.70e-14!3;CL:0000223!1.42e-13!59;CL:0002368!9.83e-12!13;CL:0002251!1.23e-09!21;CL:0002202!3.74e-08!9;CL:0002632!3.74e-08!9;CL:0002328!6.19e-07!3;CL:0000068!6.56e-07!3;CL:0000069!6.56e-07!3;CL:0000307!6.56e-07!3;CL:0000377!6.56e-07!3;CL:0002231!7.83e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.79e-20!43;CL:0002621!4.70e-14!3;CL:0000223!1.42e-13!59;CL:0002368!9.83e-12!13;CL:0002251!1.23e-09!21;CL:0002202!3.74e-08!9;CL:0002632!3.74e-08!9;CL:0002328!6.19e-07!3;CL:0000068!6.56e-07!3;CL:0000069!6.56e-07!3;CL:0000307!6.56e-07!3;CL:0000377!6.56e-07!3;CL:0002231!7.83e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.58e-34;1!UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.70e-14!3;UBERON:0000161!6.26e-11!35;UBERON:0001004!1.41e-10!72;UBERON:0000166!1.06e-09!21;UBERON:0004119!1.70e-08!169;UBERON:0000925!1.70e-08!169;UBERON:0006595!1.70e-08!169;UBERON:0007196!6.68e-08!14;UBERON:0001558!6.68e-08!14;UBERON:0003102!2.82e-07!95;UBERON:0000165!4.96e-07!28;UBERON:0000930!4.96e-07!28;UBERON:0004815!6.19e-07!3;UBERON:0002031!6.19e-07!3;UBERON:0001007!6.78e-07!155;UBERON:0001555!6.78e-07!155;UBERON:0007026!6.78e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.61e-34;1!UBERON:0001961;3.61e-34;1!UBERON:0001744;3.61e-34;1!UBERON:0001042;3.61e-34;1!UBERON:0001735;3.61e-34;1!UBERON:0000341;5.48e-18;2!UBERON:0006562;7.67e-18;2!UBERON:0003127;1.07e-17;2!UBERON:0001043;2.07e-12;3!UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0000974;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.61e-34,1;UBERON:0001961,3.61e-34,1;UBERON:0001744,3.61e-34,1;UBERON:0001735,3.61e-34,1;UBERON:0000341,5.48e-18,2;UBERON:0003127,1.27e-17,2;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0001043,2.07e-12,3;UBERON:0009143,2.07e-12,3;UBERON:0001723,2.59e-12,3;UBERON:0001033,2.59e-12,3;UBERON:0010056,2.59e-12,3;UBERON:0001557,5.94e-08,19;UBERON:0007023,1.09e-07,114;UBERON:0000072,4.89e-07,47;UBERON:0000166,5.40e-07,22 | |||
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| ||
|short_description=p@chr10:105495808..105495820,- | |short_description=p@chr10:105495808..105495820,- | ||
}} | }} |
Latest revision as of 10:02, 23 July 2015
Short description: | p@chr10:105495808..105495820, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105495808..105495820, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 3.61e-34 | 1 |
mucosa-associated lymphoid tissue | 3.61e-34 | 1 |
lymphoid tissue | 3.61e-34 | 1 |
tonsillar ring | 3.61e-34 | 1 |
throat | 5.48e-18 | 2 |
open tracheal system trachea | 1.27e-17 | 2 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
esophagus | 2.07e-12 | 3 |
esophageal region | 2.07e-12 | 3 |
tongue | 2.59e-12 | 3 |
gustatory system | 2.59e-12 | 3 |
future tongue | 2.59e-12 | 3 |
upper respiratory tract | 5.94e-08 | 19 |
adult organism | 1.09e-07 | 114 |
segment of respiratory tract | 4.89e-07 | 47 |
oral opening | 5.40e-07 | 22 |