FFCP PHASE1:Mm9::chr10:28864024..28864035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67412 | |EntrezGene=67412 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NZL0 | |UniProt=Q6NZL0 | ||
|association_with_transcript=222bp_to_ENSMUST00000092629,NM_026138,uc007est.1,uc007esu.1_5end | |association_with_transcript=222bp_to_ENSMUST00000092629,NM_026138,uc007est.1,uc007esu.1_5end | ||
|cluster_id=chr10:28864024..28864035,+ | |||
|description=CAGE_peak_8_at_6330407J23Rik_5end | |description=CAGE_peak_8_at_6330407J23Rik_5end | ||
|id=chr10:28864024..28864035,+ | |id=chr10:28864024..28864035,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.33e-23!23;CL:0000337!4.33e-23!23;CL:0000540!3.07e-20!33;CL:0000047!3.07e-20!33;CL:0000031!3.07e-20!33;CL:0000404!3.07e-20!33;CL:0000393!3.33e-16!39;CL:0000211!3.33e-16!39;CL:0002319!1.64e-15!43;CL:0000221!5.10e-15!44;CL:0000133!5.10e-15!44;CL:0000055!1.72e-12!50;CL:0002609!3.51e-08!6;CL:0002321!2.75e-07!70;CL:0000220!2.75e-07!70;CL:0000120!4.57e-07!3;CL:0002613!8.36e-07!3 | |ontology_enrichment_celltype=CL:0000117!4.33e-23!23;CL:0000337!4.33e-23!23;CL:0000540!3.07e-20!33;CL:0000047!3.07e-20!33;CL:0000031!3.07e-20!33;CL:0000404!3.07e-20!33;CL:0000393!3.33e-16!39;CL:0000211!3.33e-16!39;CL:0002319!1.64e-15!43;CL:0000221!5.10e-15!44;CL:0000133!5.10e-15!44;CL:0000055!1.72e-12!50;CL:0002609!3.51e-08!6;CL:0002321!2.75e-07!70;CL:0000220!2.75e-07!70;CL:0000120!4.57e-07!3;CL:0002613!8.36e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,6.64e-38,3;CL:0000117,1.21e-19,23;CL:0000337,1.21e-19,23;CL:0002613,2.33e-17,3;CL:0000540,8.80e-14,33;CL:0000047,8.80e-14,33;CL:0000031,8.80e-14,33;CL:0000404,8.80e-14,33;CL:0000393,1.07e-11,39;CL:0000211,1.07e-11,39;CL:0002319,1.25e-10,43;CL:0000221,2.16e-10,44;CL:0000133,2.16e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.72e-14!102;UBERON:0000924!3.72e-14!102;UBERON:0006601!3.72e-14!102;UBERON:0000073!4.37e-13!75;UBERON:0001016!4.37e-13!75;UBERON:0001017!1.24e-12!73;UBERON:0005743!1.24e-12!73;UBERON:0002346!9.54e-12!71;UBERON:0003075!9.54e-12!71;UBERON:0007284!9.54e-12!71;UBERON:0000033!2.52e-11!63;UBERON:0003056!7.09e-10!49;UBERON:0002020!2.74e-09!34;UBERON:0001049!4.01e-09!52;UBERON:0005068!4.01e-09!52;UBERON:0006241!4.01e-09!52;UBERON:0007135!4.01e-09!52;UBERON:0002616!1.63e-08!49;UBERON:0000955!3.00e-08!50;UBERON:0006238!3.00e-08!50;UBERON:0002420!4.75e-08!8;UBERON:0007245!4.75e-08!8;UBERON:0010009!4.75e-08!8;UBERON:0010011!4.75e-08!8;UBERON:0000454!4.75e-08!8;UBERON:0002791!5.09e-07!29;UBERON:0003528!5.09e-07!29;UBERON:0001893!5.09e-07!29;UBERON:0003080!7.45e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.88e-11,5;UBERON:0002435,7.88e-11,5;UBERON:0000204,7.88e-11,5;UBERON:0010082,7.88e-11,5;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0003528,2.33e-07,29;UBERON:0002791,2.33e-07,29;UBERON:0001893,2.33e-07,29;UBERON:0002420,4.05e-07,8;UBERON:0007245,4.05e-07,8;UBERON:0010009,4.05e-07,8;UBERON:0010011,4.05e-07,8;UBERON:0000454,4.05e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,1.26194976810829,0,0,0.367472397644862,0.862609239164127,0,0,0.127687338085188,0.307213066512487,1.05509030184155,0.457438218012048,1.04182674111352,0.558365998002762,0,0.15279824777681,0.883885756421003,0.427115042397309,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0.540186389416048,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.320125762024346,0.17230640686684,0.476293691283074,0,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0.237270036248348,0,0,0.464810523557898,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,1.26194976810829,0,0,0.367472397644862,0.862609239164127,0,0,0.127687338085188,0.307213066512487,1.05509030184155,0.457438218012048,1.04182674111352,0.558365998002762,0,0.15279824777681,0.883885756421003,0.427115042397309,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0.540186389416048,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.320125762024346,0.17230640686684,0.476293691283074,0,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0.237270036248348,0,0,0.464810523557898,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p8@6330407J23Rik | |short_description=p8@6330407J23Rik | ||
}} | }} |
Latest revision as of 22:42, 25 September 2015
Short description: | p8@6330407J23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_6330407J23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 222bp_to_ENSMUST00000092629, NM_026138, uc007est.1, uc007esu.1_5end |
EntrezGene: | 6330407J23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 6.64e-38 | 3 |
CNS neuron (sensu Vertebrata) | 1.21e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-19 | 23 |
striatum neuron | 2.33e-17 | 3 |
neuron | 8.80e-14 | 33 |
neuronal stem cell | 8.80e-14 | 33 |
neuroblast | 8.80e-14 | 33 |
electrically signaling cell | 8.80e-14 | 33 |
electrically responsive cell | 1.07e-11 | 39 |
electrically active cell | 1.07e-11 | 39 |
neural cell | 1.25e-10 | 43 |
ectodermal cell | 2.16e-10 | 44 |
neurectodermal cell | 2.16e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.88e-11 | 5 |
striatum | 7.88e-11 | 5 |
ventral part of telencephalon | 7.88e-11 | 5 |
future corpus striatum | 7.88e-11 | 5 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
brain grey matter | 2.33e-07 | 29 |
regional part of telencephalon | 2.33e-07 | 29 |
telencephalon | 2.33e-07 | 29 |
basal ganglion | 4.05e-07 | 8 |
nuclear complex of neuraxis | 4.05e-07 | 8 |
aggregate regional part of brain | 4.05e-07 | 8 |
collection of basal ganglia | 4.05e-07 | 8 |
cerebral subcortex | 4.05e-07 | 8 |