FFCP PHASE1:Mm9::chr13:86299734..86299735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1506 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:86299734..86299735,+ | |||
|description=CAGE_peak_at_chr13:86299734..86299735,+ | |description=CAGE_peak_at_chr13:86299734..86299735,+ | ||
|id=chr13:86299734..86299735,+ | |id=chr13:86299734..86299735,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.71e-20!9;CL:0002251!1.71e-20!9;CL:0000066!6.90e-20!25;CL:0000473!2.76e-17!3;CL:0000627!2.76e-17!3;CL:0000682!2.76e-17!3;CL:0002250!1.02e-15!3;CL:0000075!2.05e-12!7;CL:0002076!3.70e-12!15;CL:0000063!1.26e-11!66;CL:0000223!5.10e-09!20;CL:0000239!1.14e-08!6;CL:0000677!1.14e-08!6;CL:0000212!1.14e-08!6;CL:0000584!1.14e-08!6;CL:0000144!1.08e-07!121;CL:0000012!1.08e-07!121;CL:0002371!8.95e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,9.11e-14,6;CL:0000677,9.11e-14,6;CL:0000584,9.11e-14,6;CL:0000066,1.06e-12,25;CL:0000473,3.13e-12,7;CL:0000075,6.80e-12,7;CL:0002563,2.18e-09,9;CL:0002251,2.18e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!6.88e-25!13;UBERON:0000060!6.88e-25!13;UBERON:0001262!6.88e-25!13;UBERON:0004786!6.88e-25!13;UBERON:0000485!1.69e-22!11;UBERON:0000344!1.83e-21!15;UBERON:0003350!1.71e-20!9;UBERON:0004808!1.71e-20!9;UBERON:0001277!1.71e-20!9;UBERON:0004923!4.31e-13!24;UBERON:0000331!5.01e-08!3;UBERON:0002116!5.01e-08!3;UBERON:0001204!5.01e-08!3;UBERON:0001168!5.01e-08!3;UBERON:0000160!6.78e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,7.89e-17,13;UBERON:0001262,7.89e-17,13;UBERON:0004786,7.89e-17,13;UBERON:0000344,1.31e-14,15;UBERON:0000331,1.86e-12,3;UBERON:0002116,1.86e-12,3;UBERON:0001204,1.86e-12,3;UBERON:0001168,1.86e-12,3;UBERON:0002108,1.40e-09,4;UBERON:0003350,2.18e-09,9;UBERON:0004808,2.18e-09,9;UBERON:0001277,2.18e-09,9;UBERON:0004923,3.58e-09,24;UBERON:0000485,8.74e-08,11;UBERON:0000160,4.14e-07,31 | |||
|phase1_expression=0,2.09385244583617,4.54999239389536,0,0,1.00727563147134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3361753540704,5.1691439539089,1.939241094173,0,1.26015064879965,1.77384408524244,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,2.3440060335714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,4.54999239389536,0,0,1.00727563147134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3361753540704,5.1691439539089,1.939241094173,0,1.26015064879965,1.77384408524244,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,2.3440060335714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:86299734..86299735,+ | |short_description=p@chr13:86299734..86299735,+ | ||
}} | }} |
Latest revision as of 09:18, 6 August 2015
Short description: | p@chr13:86299734..86299735, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:86299734..86299735, + |
Coexpression cluster: | MCL_coexpression_mm9:1506 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.37e-27 | 3 |
brush border epithelial cell | 9.11e-14 | 6 |
gut absorptive cell | 9.11e-14 | 6 |
enterocyte | 9.11e-14 | 6 |
epithelial cell | 1.06e-12 | 25 |
defensive cell | 3.13e-12 | 7 |
columnar/cuboidal epithelial cell | 6.80e-12 | 7 |
intestinal epithelial cell | 2.18e-09 | 9 |
epithelial cell of alimentary canal | 2.18e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 7.89e-17 | 13 |
wall of intestine | 7.89e-17 | 13 |
gastrointestinal system mucosa | 7.89e-17 | 13 |
mucosa | 1.31e-14 | 15 |
ileal mucosa | 1.86e-12 | 3 |
ileum | 1.86e-12 | 3 |
mucosa of small intestine | 1.86e-12 | 3 |
wall of small intestine | 1.86e-12 | 3 |
small intestine | 1.40e-09 | 4 |
epithelium of mucosa | 2.18e-09 | 9 |
gastrointestinal system epithelium | 2.18e-09 | 9 |
intestinal epithelium | 2.18e-09 | 9 |
organ component layer | 3.58e-09 | 24 |
simple columnar epithelium | 8.74e-08 | 11 |
intestine | 4.14e-07 | 31 |