Personal tools

FFCP PHASE1:Mm9::chr10:4795805..4795832,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=64009
|EntrezGene=64009
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q6ZWR6,Q6ZWR1,Q6ZWR5,Q80T95
|UniProt=Q6ZWR6,Q6ZWR1,Q6ZWR5,Q80T95
|association_with_transcript=-16bp_to_ENSMUST00000041639,NM_153399,uc007egn.1_5end
|association_with_transcript=-16bp_to_ENSMUST00000041639,NM_153399,uc007egn.1_5end
|cluster_id=chr10:4795805..4795832,+
|description=CAGE_peak_4_at_Syne1_5end
|description=CAGE_peak_4_at_Syne1_5end
|id=chr10:4795805..4795832,+
|id=chr10:4795805..4795832,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!1.01e-10!114;UBERON:0004111!2.06e-10!122
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.82e-12,114;UBERON:0004111,1.82e-11,122;UBERON:0000073,1.74e-09,54;UBERON:0001049,1.38e-08,52;UBERON:0005068,1.38e-08,52;UBERON:0006241,1.38e-08,52;UBERON:0007135,1.38e-08,52;UBERON:0002021,3.06e-08,10;UBERON:0000411,3.06e-08,10;UBERON:0001950,3.06e-08,10;UBERON:0000955,1.82e-07,47;UBERON:0006238,1.82e-07,47;UBERON:0002616,6.95e-07,46
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0.607425802169478,2.79824751251259,0.788655413395594,0.548457734422955,0,5.52781385981954,0,0,0,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,104.632907684227,56.2561448057136,79.5756090840173,93.5288065969313,111.336414048227,101.957174136542,1.00717454380462,1.21652317463417,2.9367480345869,0,0,0,0,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,1.99955689082663,1.54607978666129,0,0,0,5.50579404996943,4.21368215681119,4.30098293117482,0.791317726381163,0.640413505216868,0.52091337055676,3.35019598801657,5.6276261003168,5.65353516774197,4.71405736757868,3.41692033917847,0.372798891650601,0.681535739998656,0.377857800533928,31.3053647797812,3.44169550792555,0,0.539703191637817,0.649776417447669,0.448026887097336,2.10666630197628,0,0,0,0.704217098883403,0,0,0,0,0,0,1.1418387971906,0.776813650941515,3.56261133755579,0.173485326766136,0.304465478312141,0.922461989024234,0.904335843315735,0.823120949949934,0.879666139307728,0.247194967734374,1.73519228303894,10.6153266233985,0.808834249737046,3.75430581382669,2.90925151881133,1.86391761218122,9.36898550436951,8.79676168616511,0.255457055208591,0.479260498023681,0,0.635351135365324,9.28701964309901,7.77751024791665,1.7591609295801,6.25767552692195,7.67146371990992,7.2725815595846,5.51620294430376,0.305518091550949,4.60305791257344,0.252722758433675,2.94618598241064,0.130120442962704,0.459804208866946,0,0.452114453507145,0.272145996605311,1.2811372028485,0.749613796477831,3.10444044886819,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0.51469581422943,1.42081749697796,0.207125772535502,0.703578179943289,0,0,0,0.462801338662135,0.232533944750408,1.07309360559848,1.05088808130453,0.493679549740441,2.62667942526552,4.86412857275134,3.65499968563331,1.75640092232841,3.62357330653004,6.72927835405207,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,2.84717436926707,0.494096864172033,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,2.37751854862164,1.59313018603494,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.210407459670956,1.13825766823663,2.06654207171443,1.09899109488962,1.60416313098341,1.77871576252289,0.667380422864376,1.17935397067922,0.224862112384854,1.82574109249653,3.61765739628625,2.29163266603278,4.60313819921297,2.59416362840057,0.549122826376163,1.43768206527355,1.48856379067401,2.18426371180192,0.757736633841335,1.61457672169721,0.964887042726734,9.05290631816363,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,2.53673742215138,1.41871629695572,1.55025282754142,4.9430978283821,8.52089236521838,5.52591941970866,10.4147322178688,0,0,0.983528546038072,0,6.10092241953609,7.61875962849321,0,0.757412781613119,0,0,0,0,0,0,0,0,0.395287777946524,17.0300297703558,1.70328102249922,0,0.162886959353576,2.47455184458803,1.32745138339963,0,0,0.188605079755898,0,0,1.03371317267288,0,0.712994756769443,1.26414703174326,0,1.03135543248187,2.04263763452273,0,0,0.214337035031592,0,0,1.15184314421485,1.2178597964584,0.23467170806371,0,0.441056796109924,0.98931751764888,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,2.33184669303881,8.15871328846243,1.19609616558497,1.857481811669,1.66675074632741,3.39063222608444,0.820165366326151,0.228778173206523,1.18984900995699,1.81936888020755,2.21119958087078,0,0,0.609958401380546,0.324016022465404,1.04544148007234,0.436725127492355,0.269728692769641,0.743881101528023,1.30877970992015,0.518459893167171,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.469428954583016,0.2604087696879,0.629156066554265,0.724752362478018,0,0,0,0,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.577271049841977,0.467507608726276,3.17422537061296,0,0,0,1.35232715822533,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,4.51801474093653,4.60325236507177,4.58316410751517,4.81188910562325,4.11049511862385,4.5323633843382,4.72515750162264,8.55610286126019,7.70342095273148,7.7664046762773,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,1.23621034343337,0,0.505394423527595,1.01391719956096,1.32038438970253,1.31098110457835,0.832326981263301,1.32101578597911,0.952587382566147,1.15884325944855,1.92909220463705,0.412085900803307,0.441596760403192,0.342869252385415,1.59728225543404,2.62279808942053,0.726732083161643,1.12931256498397,1.18460451048347,0.914639864363863,1.05227884575137,1.08643291076689,0,1.30498519936592,0.394017929502254,1.63692417267876,1.70430525304563,1.73615949883027,0.749431733813838,0.467863216890817,1.71896843238639,0.191288332068843,1.98532277207564,1.62307484934295
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0.607425802169478,2.79824751251259,0.788655413395594,0.548457734422955,0,5.52781385981954,0,0,0,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,104.632907684227,56.2561448057136,79.5756090840173,93.5288065969313,111.336414048227,101.957174136542,1.00717454380462,1.21652317463417,2.9367480345869,0,0,0,0,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,1.99955689082663,1.54607978666129,0,0,0,5.50579404996943,4.21368215681119,4.30098293117482,0.791317726381163,0.640413505216868,0.52091337055676,3.35019598801657,5.6276261003168,5.65353516774197,4.71405736757868,3.41692033917847,0.372798891650601,0.681535739998656,0.377857800533928,31.3053647797812,3.44169550792555,0,0.539703191637817,0.649776417447669,0.448026887097336,2.10666630197628,0,0,0,0.704217098883403,0,0,0,0,0,0,1.1418387971906,0.776813650941515,3.56261133755579,0.173485326766136,0.304465478312141,0.922461989024234,0.904335843315735,0.823120949949934,0.879666139307728,0.247194967734374,1.73519228303894,10.6153266233985,0.808834249737046,3.75430581382669,2.90925151881133,1.86391761218122,9.36898550436951,8.79676168616511,0.255457055208591,0.479260498023681,0,0.635351135365324,9.28701964309901,7.77751024791665,1.7591609295801,6.25767552692195,7.67146371990992,7.2725815595846,5.51620294430376,0.305518091550949,4.60305791257344,0.252722758433675,2.94618598241064,0.130120442962704,0.459804208866946,0,0.452114453507145,0.272145996605311,1.2811372028485,0.749613796477831,3.10444044886819,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0.51469581422943,1.42081749697796,0.207125772535502,0.703578179943289,0,0,0,0.462801338662135,0.232533944750408,1.07309360559848,1.05088808130453,0.493679549740441,2.62667942526552,4.86412857275134,3.65499968563331,1.75640092232841,3.62357330653004,6.72927835405207,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,2.84717436926707,0.494096864172033,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,2.37751854862164,1.59313018603494,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.210407459670956,1.13825766823663,2.06654207171443,1.09899109488962,1.60416313098341,1.77871576252289,0.667380422864376,1.17935397067922,0.224862112384854,1.82574109249653,3.61765739628625,2.29163266603278,4.60313819921297,2.59416362840057,0.549122826376163,1.43768206527355,1.48856379067401,2.18426371180192,0.757736633841335,1.61457672169721,0.964887042726734,9.05290631816363,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,2.53673742215138,1.41871629695572,1.55025282754142,4.9430978283821,8.52089236521838,5.52591941970866,10.4147322178688,0,0,0.983528546038072,0,6.10092241953609,7.61875962849321,0,0.757412781613119,0,0,0,0,0,0,0,0,0.395287777946524,17.0300297703558,1.70328102249922,0,0.162886959353576,2.47455184458803,1.32745138339963,0,0,0.188605079755898,0,0,1.03371317267288,0,0.712994756769443,1.26414703174326,0,1.03135543248187,2.04263763452273,0,0,0.214337035031592,0,0,1.15184314421485,1.2178597964584,0.23467170806371,0,0.441056796109924,0.98931751764888,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,2.33184669303881,8.15871328846243,1.19609616558497,1.857481811669,1.66675074632741,3.39063222608444,0.820165366326151,0.228778173206523,1.18984900995699,1.81936888020755,2.21119958087078,0,0,0.609958401380546,0.324016022465404,1.04544148007234,0.436725127492355,0.269728692769641,0.743881101528023,1.30877970992015,0.518459893167171,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.469428954583016,0.2604087696879,0.629156066554265,0.724752362478018,0,0,0,0,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.577271049841977,0.467507608726276,3.17422537061296,0,0,0,1.35232715822533,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,4.51801474093653,4.60325236507177,4.58316410751517,4.81188910562325,4.11049511862385,4.5323633843382,4.72515750162264,8.55610286126019,7.70342095273148,7.7664046762773,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,1.23621034343337,0,0.505394423527595,1.01391719956096,1.32038438970253,1.31098110457835,0.832326981263301,1.32101578597911,0.952587382566147,1.15884325944855,1.92909220463705,0.412085900803307,0.441596760403192,0.342869252385415,1.59728225543404,2.62279808942053,0.726732083161643,1.12931256498397,1.18460451048347,0.914639864363863,1.05227884575137,1.08643291076689,0,1.30498519936592,0.394017929502254,1.63692417267876,1.70430525304563,1.73615949883027,0.749431733813838,0.467863216890817,1.71896843238639,0.191288332068843,1.98532277207564,1.62307484934295
|short_description=p4@Syne1
|short_description=p4@Syne1
}}
}}

Latest revision as of 01:23, 26 September 2015

Short description:p4@Syne1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Syne1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: -16bp_to_ENSMUST00000041639, NM_153399, uc007egn.1_5end
EntrezGene:Syne1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Syne1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8104.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H156.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H379.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G993.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2111.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4101.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.31
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A49.29
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.60
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A48.52
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A37.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube1.82e-12114
anatomical conduit1.82e-11122
regional part of nervous system1.74e-0954
neural tube1.38e-0852
neural rod1.38e-0852
future spinal cord1.38e-0852
neural keel1.38e-0852
occipital lobe3.06e-0810
visual cortex3.06e-0810
neocortex3.06e-0810
brain1.82e-0747
future brain1.82e-0747
regional part of brain6.95e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:4795805..4795832,%2B&oldid=4225313"