FFCP PHASE1:Mm9::chr11:5050065..5050097,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140703 | |EntrezGene=140703 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=560 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=189bp_to_ENSMUST00000138551_5end | |association_with_transcript=189bp_to_ENSMUST00000138551_5end | ||
|cluster_id=chr11:5050065..5050097,- | |||
|description=CAGE_peak_4_at_Emid1_5end | |description=CAGE_peak_4_at_Emid1_5end | ||
|id=chr11:5050065..5050097,- | |id=chr11:5050065..5050097,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.06e-18,2;CL:0002612,1.42e-12,3;CL:0000710,2.01e-10,1;CL:0002077,2.01e-10,1;CL:0005014,2.01e-10,1;CL:0002315,2.01e-10,1;CL:0002490,2.01e-10,1;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23;CL:0000221,1.58e-09,44;CL:0000133,1.58e-09,44;CL:0002319,3.34e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.89e-10!102;UBERON:0000924!4.89e-10!102;UBERON:0006601!4.89e-10!102;UBERON:0000033!8.99e-08!63;UBERON:0002020!1.03e-07!34;UBERON:0001049!1.17e-07!52;UBERON:0005068!1.17e-07!52;UBERON:0006241!1.17e-07!52;UBERON:0007135!1.17e-07!52;UBERON:0002346!3.39e-07!71;UBERON:0003075!3.39e-07!71;UBERON:0007284!3.39e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.17e-28,5;UBERON:0002315,2.17e-28,5;UBERON:0002240,9.58e-24,6;UBERON:0005174,9.58e-24,6;UBERON:0001137,9.58e-24,6;UBERON:0002256,1.06e-18,2;UBERON:0002257,1.42e-12,3;UBERON:0003076,4.38e-12,12;UBERON:0003057,4.38e-12,12;UBERON:0002020,4.28e-09,34;UBERON:0000489,4.92e-07,21 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,1.14260393761521,8.61387309711293,0,0,0,0,0,0,0,0,0,0.279182999001381,1.12552522006336,0,1.17851434189467,1.99320353118744,0,2.04460721999597,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,7.18301440861071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0.2562274405697,0.749613796477831,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0.32977250588296,0,0.361877549568935,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.765153328275374,2.42650561031467,2.08681052058379 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,1.14260393761521,8.61387309711293,0,0,0,0,0,0,0,0,0,0.279182999001381,1.12552522006336,0,1.17851434189467,1.99320353118744,0,2.04460721999597,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,7.18301440861071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0.2562274405697,0.749613796477831,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0.32977250588296,0,0.361877549568935,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.765153328275374,2.42650561031467,2.08681052058379 | ||
|short_description=p4@Emid1 | |short_description=p4@Emid1 | ||
}} | }} |
Latest revision as of 15:15, 1 October 2015
Short description: | p4@Emid1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Emid1_5end |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | 189bp_to_ENSMUST00000138551_5end |
EntrezGene: | Emid1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.06e-18 | 2 |
neuron of the ventral spinal cord | 1.42e-12 | 3 |
neurecto-epithelial cell | 2.01e-10 | 1 |
ecto-epithelial cell | 2.01e-10 | 1 |
auditory epithelial support cell | 2.01e-10 | 1 |
supporting cell of cochlea | 2.01e-10 | 1 |
organ of Corti supporting cell | 2.01e-10 | 1 |
CNS neuron (sensu Vertebrata) | 1.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-09 | 23 |
ectodermal cell | 1.58e-09 | 44 |
neurectodermal cell | 1.58e-09 | 44 |
neural cell | 3.34e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 2.17e-28 | 5 |
gray matter of spinal cord | 2.17e-28 | 5 |
spinal cord | 9.58e-24 | 6 |
dorsal region element | 9.58e-24 | 6 |
dorsum | 9.58e-24 | 6 |
dorsal horn of spinal cord | 1.06e-18 | 2 |
ventral horn of spinal cord | 1.42e-12 | 3 |
posterior neural tube | 4.38e-12 | 12 |
chordal neural plate | 4.38e-12 | 12 |
gray matter | 4.28e-09 | 34 |
cavitated compound organ | 4.92e-07 | 21 |