FFCP PHASE1:Mm9::chr11:58200289..58200308,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1913 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58200289..58200308,+ | |||
|description=CAGE_peak_at_chr11:58200289..58200308,+ | |description=CAGE_peak_at_chr11:58200289..58200308,+ | ||
|id=chr11:58200289..58200308,+ | |id=chr11:58200289..58200308,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.20e-14!9;CL:0002251!8.20e-14!9;CL:0000239!2.76e-10!6;CL:0000677!2.76e-10!6;CL:0000212!2.76e-10!6;CL:0000584!2.76e-10!6;CL:0000075!1.19e-08!7;CL:0002076!2.07e-07!15;CL:0000066!5.86e-07!25 | |ontology_enrichment_celltype=CL:0002563!8.20e-14!9;CL:0002251!8.20e-14!9;CL:0000239!2.76e-10!6;CL:0000677!2.76e-10!6;CL:0000212!2.76e-10!6;CL:0000584!2.76e-10!6;CL:0000075!1.19e-08!7;CL:0002076!2.07e-07!15;CL:0000066!5.86e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.32e-20,9;CL:0002251,8.32e-20,9;CL:0000239,1.50e-14,6;CL:0000677,1.50e-14,6;CL:0000584,1.50e-14,6;CL:0000075,2.34e-12,7;CL:0002076,3.51e-11,15;CL:0000066,4.09e-11,25;CL:0000223,5.88e-08,20;CL:0000682,8.62e-08,3;CL:0002250,7.32e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.03e-27!59;UBERON:0000160!2.81e-24!43;UBERON:0000344!5.65e-23!15;UBERON:0001242!9.60e-20!13;UBERON:0000060!9.60e-20!13;UBERON:0001262!9.60e-20!13;UBERON:0004786!9.60e-20!13;UBERON:0004923!2.74e-14!24;UBERON:0003350!8.20e-14!9;UBERON:0004808!8.20e-14!9;UBERON:0001277!8.20e-14!9;UBERON:0000485!6.85e-11!11;UBERON:0001007!7.58e-09!128;UBERON:0001555!7.58e-09!128;UBERON:0007026!7.58e-09!128;UBERON:0004119!1.49e-08!130;UBERON:0000925!1.49e-08!130;UBERON:0006595!1.49e-08!130;UBERON:0004921!1.58e-07!126;UBERON:0004185!1.58e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.89e-48,31;UBERON:0005409,8.04e-41,47;UBERON:0000344,1.72e-33,15;UBERON:0001242,1.16e-28,13;UBERON:0001262,1.16e-28,13;UBERON:0004786,1.16e-28,13;UBERON:0003350,8.32e-20,9;UBERON:0004808,8.32e-20,9;UBERON:0001277,8.32e-20,9;UBERON:0004923,1.55e-19,24;UBERON:0000485,6.96e-16,11;UBERON:0001007,6.72e-15,116;UBERON:0001555,6.72e-15,116;UBERON:0007026,6.72e-15,116;UBERON:0004119,1.60e-14,118;UBERON:0000925,1.60e-14,118;UBERON:0006595,1.60e-14,118;UBERON:0004921,1.07e-12,114;UBERON:0002108,1.70e-10,4;UBERON:0000331,9.65e-09,3;UBERON:0002116,9.65e-09,3;UBERON:0001204,9.65e-09,3;UBERON:0001168,9.65e-09,3 | |||
|phase1_expression=0,5.58360652222978,5.0049916332849,7.25914107136392,6.01074875935617,5.03637815735669,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,19.0390983124154,9.40578052375397,2.8711598205751,4.30761996159075,16.3758136841276,29.453630015738,11.8454160987167,17.2949798311138,0,0,0,1.73310971850765,2.82598897109437,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,5.05445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,2.11560453330835,0,0,0.128867461322093,1.4117846723634,1.11189021922435,1.33157938278791,3.32170343081158,2.9645811850322,4.27269854960458,0.596869416123452,2.33956904542944,6.29173586057955,4.53889904736858,4.97853183135918,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,8.59203556213602,0,0,0.324016022465404,0.209088296014469,0.436725127492355,1.88810084938749,0.661227645802687,1.57053565190418,14.387262035389,0,1.12738587736838,0,0,0,0,0,0,0,0,1.20792060413003,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.644613162144895,0,0,0 | |phase1_expression=0,5.58360652222978,5.0049916332849,7.25914107136392,6.01074875935617,5.03637815735669,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,19.0390983124154,9.40578052375397,2.8711598205751,4.30761996159075,16.3758136841276,29.453630015738,11.8454160987167,17.2949798311138,0,0,0,1.73310971850765,2.82598897109437,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,5.05445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,2.11560453330835,0,0,0.128867461322093,1.4117846723634,1.11189021922435,1.33157938278791,3.32170343081158,2.9645811850322,4.27269854960458,0.596869416123452,2.33956904542944,6.29173586057955,4.53889904736858,4.97853183135918,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,8.59203556213602,0,0,0.324016022465404,0.209088296014469,0.436725127492355,1.88810084938749,0.661227645802687,1.57053565190418,14.387262035389,0,1.12738587736838,0,0,0,0,0,0,0,0,1.20792060413003,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.644613162144895,0,0,0 | ||
|short_description=p@chr11:58200289..58200308,+ | |short_description=p@chr11:58200289..58200308,+ | ||
}} | }} |
Latest revision as of 04:10, 6 August 2015
Short description: | p@chr11:58200289..58200308, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58200289..58200308, + |
Coexpression cluster: | MCL_coexpression_mm9:1913 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.32e-20 | 9 |
epithelial cell of alimentary canal | 8.32e-20 | 9 |
brush border epithelial cell | 1.50e-14 | 6 |
gut absorptive cell | 1.50e-14 | 6 |
enterocyte | 1.50e-14 | 6 |
columnar/cuboidal epithelial cell | 2.34e-12 | 7 |
endo-epithelial cell | 3.51e-11 | 15 |
epithelial cell | 4.09e-11 | 25 |
endodermal cell | 5.88e-08 | 20 |
M cell of gut | 8.62e-08 | 3 |
intestinal crypt stem cell | 7.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.89e-48 | 31 |
gastrointestinal system | 8.04e-41 | 47 |
mucosa | 1.72e-33 | 15 |
intestinal mucosa | 1.16e-28 | 13 |
wall of intestine | 1.16e-28 | 13 |
gastrointestinal system mucosa | 1.16e-28 | 13 |
epithelium of mucosa | 8.32e-20 | 9 |
gastrointestinal system epithelium | 8.32e-20 | 9 |
intestinal epithelium | 8.32e-20 | 9 |
organ component layer | 1.55e-19 | 24 |
simple columnar epithelium | 6.96e-16 | 11 |
digestive system | 6.72e-15 | 116 |
digestive tract | 6.72e-15 | 116 |
primitive gut | 6.72e-15 | 116 |
endoderm-derived structure | 1.60e-14 | 118 |
endoderm | 1.60e-14 | 118 |
presumptive endoderm | 1.60e-14 | 118 |
subdivision of digestive tract | 1.07e-12 | 114 |
small intestine | 1.70e-10 | 4 |
ileal mucosa | 9.65e-09 | 3 |
ileum | 9.65e-09 | 3 |
mucosa of small intestine | 9.65e-09 | 3 |
wall of small intestine | 9.65e-09 | 3 |