FFCP PHASE1:Mm9::chr16:30055801..30055806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30055801..30055806,+ | |||
|description=CAGE_peak_at_chr16:30055801..30055806,+ | |description=CAGE_peak_at_chr16:30055801..30055806,+ | ||
|id=chr16:30055801..30055806,+ | |id=chr16:30055801..30055806,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.10e-21!9;CL:0002251!3.10e-21!9;CL:0002076!4.61e-21!15;CL:0000066!1.47e-18!25;CL:0000223!4.81e-15!20;CL:0000239!1.57e-14!6;CL:0000677!1.57e-14!6;CL:0000212!1.57e-14!6;CL:0000584!1.57e-14!6;CL:0000075!2.52e-12!7;CL:0002250!2.81e-08!3;CL:0000473!6.49e-08!3;CL:0000627!6.49e-08!3;CL:0000682!6.49e-08!3;CL:0000068!2.30e-07!3;CL:0002202!2.30e-07!3;CL:0000069!2.30e-07!3;CL:0002632!2.30e-07!3;CL:0002368!2.30e-07!3;CL:0000307!2.30e-07!3;CL:0000377!2.30e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.47e-50,9;CL:0002251,3.47e-50,9;CL:0002076,2.04e-36,15;CL:0000066,2.41e-36,25;CL:0000239,1.54e-33,6;CL:0000677,1.54e-33,6;CL:0000584,1.54e-33,6;CL:0000075,1.02e-28,7;CL:0000223,4.94e-27,20;CL:0002250,4.28e-18,3;CL:0000682,3.35e-17,3;CL:0000473,1.10e-07,7;CL:0002321,8.41e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.17e-28!15;UBERON:0001242!5.88e-25!13;UBERON:0000060!5.88e-25!13;UBERON:0001262!5.88e-25!13;UBERON:0004786!5.88e-25!13;UBERON:0005409!9.28e-25!59;UBERON:0000160!1.37e-24!43;UBERON:0003350!3.10e-21!9;UBERON:0004808!3.10e-21!9;UBERON:0001277!3.10e-21!9;UBERON:0004923!6.23e-19!24;UBERON:0000485!5.29e-17!11;UBERON:0001007!2.42e-12!128;UBERON:0001555!2.42e-12!128;UBERON:0007026!2.42e-12!128;UBERON:0004119!4.96e-12!130;UBERON:0000925!4.96e-12!130;UBERON:0006595!4.96e-12!130;UBERON:0004921!1.22e-10!126;UBERON:0004185!1.22e-10!126;UBERON:0000331!1.47e-07!3;UBERON:0002116!1.47e-07!3;UBERON:0001204!1.47e-07!3;UBERON:0001168!1.47e-07!3;UBERON:0003126!2.30e-07!3;UBERON:0001005!2.30e-07!3;UBERON:0007196!2.30e-07!3;UBERON:0001558!2.30e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.83e-60,13;UBERON:0001262,3.83e-60,13;UBERON:0004786,3.83e-60,13;UBERON:0000344,5.92e-52,15;UBERON:0003350,3.47e-50,9;UBERON:0004808,3.47e-50,9;UBERON:0001277,3.47e-50,9;UBERON:0000485,6.63e-41,11;UBERON:0004923,5.79e-32,24;UBERON:0000160,2.01e-24,31;UBERON:0000331,2.48e-16,3;UBERON:0002116,2.48e-16,3;UBERON:0001204,2.48e-16,3;UBERON:0001168,2.48e-16,3;UBERON:0005409,1.36e-15,47;UBERON:0002108,2.09e-12,4;UBERON:0003929,2.54e-07,55 | |||
|phase1_expression=0,3.83872948403297,5.0049916332849,4.23449895829562,4.50806156951712,9.06548068324205,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.45881856213434,2.8711598205751,4.30761996159075,4.95583835177545,1.14014051673824,1.00812051903972,1.55211357458713,0,0,0,21.9527231010969,4.3221007793208,29.8087260143059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.83872948403297,5.0049916332849,4.23449895829562,4.50806156951712,9.06548068324205,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.45881856213434,2.8711598205751,4.30761996159075,4.95583835177545,1.14014051673824,1.00812051903972,1.55211357458713,0,0,0,21.9527231010969,4.3221007793208,29.8087260143059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:30055801..30055806,+ | |short_description=p@chr16:30055801..30055806,+ | ||
}} | }} |
Latest revision as of 06:50, 6 August 2015
Short description: | p@chr16:30055801..30055806, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:30055801..30055806, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.47e-50 | 9 |
epithelial cell of alimentary canal | 3.47e-50 | 9 |
endo-epithelial cell | 2.04e-36 | 15 |
epithelial cell | 2.41e-36 | 25 |
brush border epithelial cell | 1.54e-33 | 6 |
gut absorptive cell | 1.54e-33 | 6 |
enterocyte | 1.54e-33 | 6 |
columnar/cuboidal epithelial cell | 1.02e-28 | 7 |
endodermal cell | 4.94e-27 | 20 |
intestinal crypt stem cell | 4.28e-18 | 3 |
M cell of gut | 3.35e-17 | 3 |
defensive cell | 1.10e-07 | 7 |
embryonic cell | 8.41e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.83e-60 | 13 |
wall of intestine | 3.83e-60 | 13 |
gastrointestinal system mucosa | 3.83e-60 | 13 |
mucosa | 5.92e-52 | 15 |
epithelium of mucosa | 3.47e-50 | 9 |
gastrointestinal system epithelium | 3.47e-50 | 9 |
intestinal epithelium | 3.47e-50 | 9 |
simple columnar epithelium | 6.63e-41 | 11 |
organ component layer | 5.79e-32 | 24 |
intestine | 2.01e-24 | 31 |
ileal mucosa | 2.48e-16 | 3 |
ileum | 2.48e-16 | 3 |
mucosa of small intestine | 2.48e-16 | 3 |
wall of small intestine | 2.48e-16 | 3 |
gastrointestinal system | 1.36e-15 | 47 |
small intestine | 2.09e-12 | 4 |
gut epithelium | 2.54e-07 | 55 |