FFCP PHASE1:Mm9::chr12:77896303..77896342,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:77896303..77896342,- | |||
|description=CAGE_peak_at_chr12:77896303..77896342,- | |description=CAGE_peak_at_chr12:77896303..77896342,- | ||
|id=chr12:77896303..77896342,- | |id=chr12:77896303..77896342,- | ||
|ontology_enrichment_celltype=CL:0000066!6.43e-16!25;CL:0002076!5.72e-15!15;CL:0002563!7.85e-14!9;CL:0002251!7.85e-14!9;CL:0000223!1.41e-10!20;CL:0000239!1.51e-08!6;CL:0000677!1.51e-08!6;CL:0000212!1.51e-08!6;CL:0000584!1.51e-08!6;CL:0000473!8.00e-08!3;CL:0000627!8.00e-08!3;CL:0000682!8.00e-08!3;CL:0000075!2.95e-07!7;CL:0000068!3.73e-07!3;CL:0002202!3.73e-07!3;CL:0000069!3.73e-07!3;CL:0002632!3.73e-07!3;CL:0002368!3.73e-07!3;CL:0000307!3.73e-07!3;CL:0000377!3.73e-07!3;CL:0002250!5.40e-07!3 | |ontology_enrichment_celltype=CL:0000066!6.43e-16!25;CL:0002076!5.72e-15!15;CL:0002563!7.85e-14!9;CL:0002251!7.85e-14!9;CL:0000223!1.41e-10!20;CL:0000239!1.51e-08!6;CL:0000677!1.51e-08!6;CL:0000212!1.51e-08!6;CL:0000584!1.51e-08!6;CL:0000473!8.00e-08!3;CL:0000627!8.00e-08!3;CL:0000682!8.00e-08!3;CL:0000075!2.95e-07!7;CL:0000068!3.73e-07!3;CL:0002202!3.73e-07!3;CL:0000069!3.73e-07!3;CL:0002632!3.73e-07!3;CL:0002368!3.73e-07!3;CL:0000307!3.73e-07!3;CL:0000377!3.73e-07!3;CL:0002250!5.40e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.95e-24,15;CL:0000066,1.07e-23,25;CL:0002563,6.38e-22,9;CL:0002251,6.38e-22,9;CL:0000223,7.78e-18,20;CL:0000239,2.99e-13,6;CL:0000677,2.99e-13,6;CL:0000584,2.99e-13,6;CL:0000682,8.29e-12,3;CL:0000075,2.49e-11,7;CL:0000068,1.02e-10,3;CL:0002202,1.02e-10,3;CL:0000069,1.02e-10,3;CL:0002632,1.02e-10,3;CL:0002368,1.02e-10,3;CL:0000307,1.02e-10,3;CL:0000377,1.02e-10,3;CL:0002250,1.86e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.89e-25!15;UBERON:0001242!2.39e-21!13;UBERON:0000060!2.39e-21!13;UBERON:0001262!2.39e-21!13;UBERON:0004786!2.39e-21!13;UBERON:0005409!5.07e-20!59;UBERON:0004923!2.80e-14!24;UBERON:0001007!3.69e-14!128;UBERON:0001555!3.69e-14!128;UBERON:0007026!3.69e-14!128;UBERON:0000160!4.54e-14!43;UBERON:0003350!7.85e-14!9;UBERON:0004808!7.85e-14!9;UBERON:0001277!7.85e-14!9;UBERON:0004119!8.39e-14!130;UBERON:0000925!8.39e-14!130;UBERON:0006595!8.39e-14!130;UBERON:0000485!9.90e-14!11;UBERON:0004921!2.57e-12!126;UBERON:0004185!2.57e-12!126;UBERON:0000331!1.13e-07!3;UBERON:0002116!1.13e-07!3;UBERON:0001204!1.13e-07!3;UBERON:0001168!1.13e-07!3;UBERON:0003126!3.73e-07!3;UBERON:0001005!3.73e-07!3;UBERON:0007196!3.73e-07!3;UBERON:0001558!3.73e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.82e-35,15;UBERON:0001242,3.46e-29,13;UBERON:0001262,3.46e-29,13;UBERON:0004786,3.46e-29,13;UBERON:0003350,6.38e-22,9;UBERON:0004808,6.38e-22,9;UBERON:0001277,6.38e-22,9;UBERON:0004923,4.94e-21,24;UBERON:0000160,5.33e-21,31;UBERON:0005409,3.14e-19,47;UBERON:0000485,9.82e-18,11;UBERON:0001007,3.32e-12,116;UBERON:0001555,3.32e-12,116;UBERON:0007026,3.32e-12,116;UBERON:0004119,6.36e-12,118;UBERON:0000925,6.36e-12,118;UBERON:0006595,6.36e-12,118;UBERON:0000331,1.45e-11,3;UBERON:0002116,1.45e-11,3;UBERON:0001204,1.45e-11,3;UBERON:0001168,1.45e-11,3;UBERON:0003126,1.02e-10,3;UBERON:0001005,1.02e-10,3;UBERON:0007196,1.02e-10,3;UBERON:0001558,1.02e-10,3;UBERON:0004921,5.48e-10,114;UBERON:0002108,8.97e-09,4;UBERON:0001962,1.56e-07,2;UBERON:0001961,1.56e-07,2;UBERON:0001744,1.56e-07,2;UBERON:0001155,2.27e-07,2;UBERON:0000059,2.27e-07,2 | |||
|phase1_expression=0.320297694209588,4.18770489167233,5.0049916332849,0,1.00179145989269,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.67054849707472,6.89078356938024,6.8921919385452,6.46413698057667,4.3705386474966,6.04872311423834,22.6165120868411,0,0,0,4.04392267651784,3.32469290716985,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,4.11332977921307,1.77351905832569,5.56076889516262,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,2.16138049874694,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0.540026704109006,0.209088296014469,0.218362563746178,0.944050424693745,0.330613822901344,1.30877970992015,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21479882314986,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,4.18770489167233,5.0049916332849,0,1.00179145989269,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.67054849707472,6.89078356938024,6.8921919385452,6.46413698057667,4.3705386474966,6.04872311423834,22.6165120868411,0,0,0,4.04392267651784,3.32469290716985,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,4.11332977921307,1.77351905832569,5.56076889516262,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,2.16138049874694,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0.540026704109006,0.209088296014469,0.218362563746178,0.944050424693745,0.330613822901344,1.30877970992015,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21479882314986,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:77896303..77896342,- | |short_description=p@chr12:77896303..77896342,- | ||
}} | }} |
Latest revision as of 06:32, 5 August 2015
Short description: | p@chr12:77896303..77896342, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:77896303..77896342, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.95e-24 | 15 |
epithelial cell | 1.07e-23 | 25 |
intestinal epithelial cell | 6.38e-22 | 9 |
epithelial cell of alimentary canal | 6.38e-22 | 9 |
endodermal cell | 7.78e-18 | 20 |
brush border epithelial cell | 2.99e-13 | 6 |
gut absorptive cell | 2.99e-13 | 6 |
enterocyte | 2.99e-13 | 6 |
M cell of gut | 8.29e-12 | 3 |
columnar/cuboidal epithelial cell | 2.49e-11 | 7 |
duct epithelial cell | 1.02e-10 | 3 |
epithelial cell of tracheobronchial tree | 1.02e-10 | 3 |
branched duct epithelial cell | 1.02e-10 | 3 |
epithelial cell of lower respiratory tract | 1.02e-10 | 3 |
respiratory epithelial cell | 1.02e-10 | 3 |
tracheal epithelial cell | 1.02e-10 | 3 |
tracheoblast | 1.02e-10 | 3 |
intestinal crypt stem cell | 1.86e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.82e-35 | 15 |
intestinal mucosa | 3.46e-29 | 13 |
wall of intestine | 3.46e-29 | 13 |
gastrointestinal system mucosa | 3.46e-29 | 13 |
epithelium of mucosa | 6.38e-22 | 9 |
gastrointestinal system epithelium | 6.38e-22 | 9 |
intestinal epithelium | 6.38e-22 | 9 |
organ component layer | 4.94e-21 | 24 |
intestine | 5.33e-21 | 31 |
gastrointestinal system | 3.14e-19 | 47 |
simple columnar epithelium | 9.82e-18 | 11 |
digestive system | 3.32e-12 | 116 |
digestive tract | 3.32e-12 | 116 |
primitive gut | 3.32e-12 | 116 |
endoderm-derived structure | 6.36e-12 | 118 |
endoderm | 6.36e-12 | 118 |
presumptive endoderm | 6.36e-12 | 118 |
ileal mucosa | 1.45e-11 | 3 |
ileum | 1.45e-11 | 3 |
mucosa of small intestine | 1.45e-11 | 3 |
wall of small intestine | 1.45e-11 | 3 |
trachea | 1.02e-10 | 3 |
respiratory airway | 1.02e-10 | 3 |
tracheobronchial tree | 1.02e-10 | 3 |
lower respiratory tract | 1.02e-10 | 3 |
subdivision of digestive tract | 5.48e-10 | 114 |
small intestine | 8.97e-09 | 4 |
gut-associated lymphoid tissue | 1.56e-07 | 2 |
mucosa-associated lymphoid tissue | 1.56e-07 | 2 |
lymphoid tissue | 1.56e-07 | 2 |
colon | 2.27e-07 | 2 |
large intestine | 2.27e-07 | 2 |