FFCP PHASE1:Hg19::chr11:5246733..5246761,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_AY034472_5end | |association_with_transcript=-42bp_to_AY034472_5end | ||
|cluster_id=chr11:5246733..5246761,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_AY034472_5end | |description=CAGE_peak_1_at_AY034472_5end | ||
|id=chr11:5246733..5246761,- | |id=chr11:5246733..5246761,- | ||
|ontology_enrichment_celltype=CL:0000842!5.53e-09!3;CL:0000764!1.76e-07!2;CL:0000765!1.76e-07!2;CL:0000050!1.76e-07!2;CL:0000038!1.76e-07!2;CL:0000558!1.76e-07!2;CL:0000547!1.76e-07!2;CL:0000549!1.76e-07!2;CL:0000550!1.76e-07!2;CL:0000552!1.76e-07!2;CL:0000224!7.79e-07!4 | |ontology_enrichment_celltype=CL:0000842!5.53e-09!3;CL:0000764!1.76e-07!2;CL:0000765!1.76e-07!2;CL:0000050!1.76e-07!2;CL:0000038!1.76e-07!2;CL:0000558!1.76e-07!2;CL:0000547!1.76e-07!2;CL:0000549!1.76e-07!2;CL:0000550!1.76e-07!2;CL:0000552!1.76e-07!2;CL:0000224!7.79e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000764;5.76e-21;2!CL:0000558;5.76e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.76e-21,2;CL:0000765,5.76e-21,2;CL:0000050,5.76e-21,2;CL:0000038,5.76e-21,2;CL:0000558,5.76e-21,2;CL:0000547,5.76e-21,2;CL:0000549,5.76e-21,2;CL:0000550,5.76e-21,2;CL:0000552,5.76e-21,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.26e-36!115;UBERON:0000178!6.71e-28!15;UBERON:0000179!6.71e-28!15;UBERON:0000463!6.71e-28!15;UBERON:0002390!1.91e-07!102;UBERON:0003061!1.91e-07!102;UBERON:0003127!4.79e-07!2;UBERON:0002133!6.45e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.83e-54;15!UBERON:0000179;8.83e-54;15!UBERON:0000463;8.83e-54;15!UBERON:0002390;3.70e-28;32!UBERON:0002193;4.13e-14;42!UBERON:0002134;3.82e-11;1!UBERON:0005208;3.82e-11;1!UBERON:0004145;3.82e-11;1!UBERON:0005946;3.82e-11;1!UBERON:0005965;3.82e-11;1!UBERON:0002078;3.82e-11;1!UBERON:0007023;4.83e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.83e-54,15;UBERON:0000179,8.83e-54,15;UBERON:0000463,8.83e-54,15;UBERON:0007023,1.55e-17,114;UBERON:0002134,4.01e-11,1;UBERON:0005208,4.01e-11,1;UBERON:0005946,4.01e-11,1;UBERON:0005965,4.01e-11,1;UBERON:0002078,4.01e-11,1;UBERON:0004535,1.40e-09,109;UBERON:0001009,2.80e-09,112;UBERON:0002390,7.65e-09,98;UBERON:0003061,7.65e-09,98;UBERON:0002193,6.76e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5837672945313,30.8493832209383,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,58.3564750616995,72.6405346785257,93.4221386965627,80.5223401047327,67.4634127861358,36.3145054267922,52.9230808493352,144.348782085557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.591860433821602,155.664010025511,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,2.15361907373044,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62534444561107,0.517131825446202,0,0,0,1.81538601365081,2.67247318669432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,3.48072595057317,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,5.75731751132648,0,0.0645889098360061,0.186224142887574,0,0.445530107947154,0.202117188958219,0,0.342233301085281,0,0.430333232356058,1.33064142618405,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5837672945313,30.8493832209383,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,58.3564750616995,72.6405346785257,93.4221386965627,80.5223401047327,67.4634127861358,36.3145054267922,52.9230808493352,144.348782085557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.591860433821602,155.664010025511,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,2.15361907373044,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62534444561107,0.517131825446202,0,0,0,1.81538601365081,2.67247318669432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,3.48072595057317,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,5.75731751132648,0,0.0645889098360061,0.186224142887574,0,0.445530107947154,0.202117188958219,0,0.342233301085281,0,0.430333232356058,1.33064142618405,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p1@AY034472 | |short_description=p1@AY034472 | ||
}} | }} |
Latest revision as of 22:48, 23 July 2015
Short description: | p1@AY034472 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AY034472_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -42bp_to_AY034472_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.76e-21 | 2 |
erythroblast | 5.76e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 5.76e-21 | 2 |
erythroid progenitor cell | 5.76e-21 | 2 |
reticulocyte | 5.76e-21 | 2 |
proerythroblast | 5.76e-21 | 2 |
basophilic erythroblast | 5.76e-21 | 2 |
polychromatophilic erythroblast | 5.76e-21 | 2 |
orthochromatic erythroblast | 5.76e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.83e-54 | 15 |
haemolymphatic fluid | 8.83e-54 | 15 |
organism substance | 8.83e-54 | 15 |
adult organism | 1.55e-17 | 114 |
tricuspid valve | 4.01e-11 | 1 |
right atrium valve | 4.01e-11 | 1 |
outflow tract of atrium | 4.01e-11 | 1 |
outflow part of right atrium | 4.01e-11 | 1 |
right cardiac atrium | 4.01e-11 | 1 |
cardiovascular system | 1.40e-09 | 109 |
circulatory system | 2.80e-09 | 112 |
hematopoietic system | 7.65e-09 | 98 |
blood island | 7.65e-09 | 98 |
hemolymphoid system | 6.76e-08 | 108 |