FFCP PHASE1:Mm9::chr17:57120743..57120752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:57120743..57120752,+ | |||
|description=CAGE_peak_at_chr17:57120743..57120752,+ | |description=CAGE_peak_at_chr17:57120743..57120752,+ | ||
|id=chr17:57120743..57120752,+ | |id=chr17:57120743..57120752,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.37e-17!9;CL:0002251!6.37e-17!9;CL:0000239!5.75e-12!6;CL:0000677!5.75e-12!6;CL:0000212!5.75e-12!6;CL:0000584!5.75e-12!6;CL:0000075!3.99e-10!7;CL:0002076!2.35e-09!15;CL:0000066!3.36e-07!25 | |ontology_enrichment_celltype=CL:0002563!6.37e-17!9;CL:0002251!6.37e-17!9;CL:0000239!5.75e-12!6;CL:0000677!5.75e-12!6;CL:0000212!5.75e-12!6;CL:0000584!5.75e-12!6;CL:0000075!3.99e-10!7;CL:0002076!2.35e-09!15;CL:0000066!3.36e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.08e-16,9;CL:0002251,2.08e-16,9;CL:0000239,1.15e-11,6;CL:0000677,1.15e-11,6;CL:0000584,1.15e-11,6;CL:0000075,5.09e-10,7;CL:0002076,1.16e-09,15;CL:0000223,4.01e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.43e-33!59;UBERON:0000160!3.95e-32!43;UBERON:0000344!1.39e-27!15;UBERON:0001242!5.94e-24!13;UBERON:0000060!5.94e-24!13;UBERON:0001262!5.94e-24!13;UBERON:0004786!5.94e-24!13;UBERON:0003350!6.37e-17!9;UBERON:0004808!6.37e-17!9;UBERON:0001277!6.37e-17!9;UBERON:0004923!1.07e-15!24;UBERON:0000485!1.77e-13!11;UBERON:0001007!2.36e-12!128;UBERON:0001555!2.36e-12!128;UBERON:0007026!2.36e-12!128;UBERON:0004119!5.06e-12!130;UBERON:0000925!5.06e-12!130;UBERON:0006595!5.06e-12!130;UBERON:0004921!1.14e-10!126;UBERON:0004185!1.14e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.94e-42,31;UBERON:0000344,2.73e-32,15;UBERON:0005409,4.76e-30,47;UBERON:0001242,4.09e-25,13;UBERON:0001262,4.09e-25,13;UBERON:0004786,4.09e-25,13;UBERON:0004923,1.51e-19,24;UBERON:0003350,2.08e-16,9;UBERON:0004808,2.08e-16,9;UBERON:0001277,2.08e-16,9;UBERON:0000485,2.40e-13,11;UBERON:0001007,2.72e-13,116;UBERON:0001555,2.72e-13,116;UBERON:0007026,2.72e-13,116;UBERON:0004119,5.17e-13,118;UBERON:0000925,5.17e-13,118;UBERON:0006595,5.17e-13,118;UBERON:0004921,1.21e-10,114;UBERON:0002108,6.31e-10,4;UBERON:0001155,1.22e-09,2;UBERON:0000059,1.22e-09,2;UBERON:0001962,2.67e-09,2;UBERON:0001961,2.67e-09,2;UBERON:0001744,2.67e-09,2 | |||
|phase1_expression=0,1.74487703819681,0.909998478779072,7.86406949397758,5.50985302940982,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.83527424853736,0.57423196411502,0,0.215471232685889,1.14014051673824,3.52842181663903,0.665191531965914,0,0,0,1.73310971850765,0.831173226792462,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,5.02456076660734,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,4.2707615539006,0.329397909448022,1.25667604400135,1.39269530428806,0.779856348476481,0.898819408654221,3.45820879799511,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.436725127492355,0.674321731924103,0.165306911450672,0.523511883968059,8.42497326396654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.74487703819681,0.909998478779072,7.86406949397758,5.50985302940982,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.83527424853736,0.57423196411502,0,0.215471232685889,1.14014051673824,3.52842181663903,0.665191531965914,0,0,0,1.73310971850765,0.831173226792462,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,5.02456076660734,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,4.2707615539006,0.329397909448022,1.25667604400135,1.39269530428806,0.779856348476481,0.898819408654221,3.45820879799511,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.436725127492355,0.674321731924103,0.165306911450672,0.523511883968059,8.42497326396654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr17:57120743..57120752,+ | |short_description=p@chr17:57120743..57120752,+ | ||
}} | }} |
Latest revision as of 03:48, 5 August 2015
Short description: | p@chr17:57120743..57120752, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57120743..57120752, + |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.08e-16 | 9 |
epithelial cell of alimentary canal | 2.08e-16 | 9 |
brush border epithelial cell | 1.15e-11 | 6 |
gut absorptive cell | 1.15e-11 | 6 |
enterocyte | 1.15e-11 | 6 |
columnar/cuboidal epithelial cell | 5.09e-10 | 7 |
endo-epithelial cell | 1.16e-09 | 15 |
endodermal cell | 4.01e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.94e-42 | 31 |
mucosa | 2.73e-32 | 15 |
gastrointestinal system | 4.76e-30 | 47 |
intestinal mucosa | 4.09e-25 | 13 |
wall of intestine | 4.09e-25 | 13 |
gastrointestinal system mucosa | 4.09e-25 | 13 |
organ component layer | 1.51e-19 | 24 |
epithelium of mucosa | 2.08e-16 | 9 |
gastrointestinal system epithelium | 2.08e-16 | 9 |
intestinal epithelium | 2.08e-16 | 9 |
simple columnar epithelium | 2.40e-13 | 11 |
digestive system | 2.72e-13 | 116 |
digestive tract | 2.72e-13 | 116 |
primitive gut | 2.72e-13 | 116 |
endoderm-derived structure | 5.17e-13 | 118 |
endoderm | 5.17e-13 | 118 |
presumptive endoderm | 5.17e-13 | 118 |
subdivision of digestive tract | 1.21e-10 | 114 |
small intestine | 6.31e-10 | 4 |
colon | 1.22e-09 | 2 |
large intestine | 1.22e-09 | 2 |
gut-associated lymphoid tissue | 2.67e-09 | 2 |
mucosa-associated lymphoid tissue | 2.67e-09 | 2 |
lymphoid tissue | 2.67e-09 | 2 |