FFCP PHASE1:Hg19::chr12:31886096..31886103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:31886096..31886103,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:31886096..31886103,+ | |description=CAGE_peak_at_chr12:31886096..31886103,+ | ||
|id=chr12:31886096..31886103,+ | |id=chr12:31886096..31886103,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.04e-22!45;CL:0002057!2.90e-19!42;CL:0002009!9.54e-16!65;CL:0000066!4.13e-15!254;CL:0002076!1.46e-14!43;CL:0000557!9.66e-14!71;CL:0002194!1.32e-13!63;CL:0000576!1.32e-13!63;CL:0000040!1.32e-13!63;CL:0000559!1.32e-13!63;CL:0002368!9.09e-13!13;CL:0000223!3.88e-12!59;CL:0000766!4.48e-12!76;CL:0000839!1.58e-11!70;CL:0000076!2.27e-09!62;CL:0000063!3.66e-09!578;CL:0002159!3.69e-08!13;CL:0002202!2.03e-07!9;CL:0002632!2.03e-07!9;CL:0000763!2.49e-07!112;CL:0000049!2.49e-07!112;CL:0002328!8.45e-07!3;CL:0002166!9.85e-07!3 | |ontology_enrichment_celltype=CL:0000860!1.04e-22!45;CL:0002057!2.90e-19!42;CL:0002009!9.54e-16!65;CL:0000066!4.13e-15!254;CL:0002076!1.46e-14!43;CL:0000557!9.66e-14!71;CL:0002194!1.32e-13!63;CL:0000576!1.32e-13!63;CL:0000040!1.32e-13!63;CL:0000559!1.32e-13!63;CL:0002368!9.09e-13!13;CL:0000223!3.88e-12!59;CL:0000766!4.48e-12!76;CL:0000839!1.58e-11!70;CL:0000076!2.27e-09!62;CL:0000063!3.66e-09!578;CL:0002159!3.69e-08!13;CL:0002202!2.03e-07!9;CL:0002632!2.03e-07!9;CL:0000763!2.49e-07!112;CL:0000049!2.49e-07!112;CL:0002328!8.45e-07!3;CL:0002166!9.85e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.68e-33;33!CL:0002057;2.68e-33;33!CL:0000473;4.11e-25;39!CL:0000234;4.11e-25;39!CL:0000576;5.60e-15;48!CL:0000307;2.59e-14;3!CL:0002368;1.49e-12;13!CL:0002202;1.55e-10;9!CL:0002632;1.55e-10;9!CL:0000766;3.38e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.95e-27,42;CL:0002057,2.95e-27,42;CL:0000473,1.18e-23,48;CL:0000234,1.18e-23,48;CL:0002009,1.55e-21,61;CL:0000557,1.77e-19,67;CL:0002194,1.31e-18,59;CL:0000576,1.31e-18,59;CL:0000040,1.31e-18,59;CL:0000559,1.31e-18,59;CL:0000839,1.70e-16,66;CL:0000766,5.23e-15,72;CL:0000068,4.14e-14,3;CL:0000069,4.14e-14,3;CL:0000307,4.14e-14,3;CL:0000377,4.14e-14,3;CL:0002368,2.07e-12,13;CL:0000763,1.83e-11,108;CL:0000049,1.83e-11,108;CL:0002202,2.26e-10,9;CL:0002632,2.26e-10,9;CL:0002031,3.83e-10,120;CL:0002087,7.83e-09,115;CL:0000738,9.71e-09,136;CL:0002032,4.23e-07,161;CL:0000837,4.23e-07,161;CL:0000037,9.97e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-20;42!CL:0000377;2.59e-14;3 | |||
|ontology_enrichment_disease=DOID:305!3.66e-10!106;DOID:1749!5.94e-09!14;DOID:0050687!5.36e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.54e-11!80;UBERON:0001474!5.25e-10!86;UBERON:0004765!6.41e-10!101;UBERON:0001434!6.41e-10!101;UBERON:0002390!2.57e-07!102;UBERON:0003061!2.57e-07!102;UBERON:0001004!5.78e-07!72;UBERON:0004815!8.45e-07!3;UBERON:0002031!8.45e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.42e-17,76;UBERON:0001474,1.24e-15,82;UBERON:0004765,4.26e-14,90;UBERON:0002405,1.37e-13,93;UBERON:0002390,8.26e-13,98;UBERON:0003061,8.26e-13,98;UBERON:0001434,1.61e-12,100;UBERON:0002193,1.83e-11,108;UBERON:0002204,8.86e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0,0.154816123316076,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,1.39457422143411,0,1.54853185447552,1.1507695692886,0,1.6553756092201,2.75796544589295,2.5819387343353,5.41705946377367,0.188242339542605,0.818718450173537,0.674170453335254,1.22433556948361,0.320929027076094,3.83602275479425,0,0,0,0.290209238628584,0,0.622822248995575,0.502497330513487,1.5644487552606,3.04064382587163,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,2.67986696238627,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,2.01090682660736,1.08890984861323,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0,0.171986032471617,0.290268993867255,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0,0,0.288180834308212,0,0,0.288109595976299,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.275078873194468,0,0.899895566206002,3.86900977278975,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,1.24082554265728,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0,0.154816123316076,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,1.39457422143411,0,1.54853185447552,1.1507695692886,0,1.6553756092201,2.75796544589295,2.5819387343353,5.41705946377367,0.188242339542605,0.818718450173537,0.674170453335254,1.22433556948361,0.320929027076094,3.83602275479425,0,0,0,0.290209238628584,0,0.622822248995575,0.502497330513487,1.5644487552606,3.04064382587163,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,2.67986696238627,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,2.01090682660736,1.08890984861323,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0,0.171986032471617,0.290268993867255,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0,0,0.288180834308212,0,0,0.288109595976299,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.275078873194468,0,0.899895566206002,3.86900977278975,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,1.24082554265728,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:31886096..31886103,+ | |short_description=p@chr12:31886096..31886103,+ | ||
}} | }} |
Latest revision as of 08:09, 24 July 2015
Short description: | p@chr12:31886096..31886103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31886096..31886103, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.95e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.95e-27 | 42 |
defensive cell | 1.18e-23 | 48 |
phagocyte | 1.18e-23 | 48 |
macrophage dendritic cell progenitor | 1.55e-21 | 61 |
granulocyte monocyte progenitor cell | 1.77e-19 | 67 |
monopoietic cell | 1.31e-18 | 59 |
monocyte | 1.31e-18 | 59 |
monoblast | 1.31e-18 | 59 |
promonocyte | 1.31e-18 | 59 |
myeloid lineage restricted progenitor cell | 1.70e-16 | 66 |
myeloid leukocyte | 5.23e-15 | 72 |
duct epithelial cell | 4.14e-14 | 3 |
branched duct epithelial cell | 4.14e-14 | 3 |
tracheal epithelial cell | 4.14e-14 | 3 |
tracheoblast | 4.14e-14 | 3 |
respiratory epithelial cell | 2.07e-12 | 13 |
myeloid cell | 1.83e-11 | 108 |
common myeloid progenitor | 1.83e-11 | 108 |
epithelial cell of tracheobronchial tree | 2.26e-10 | 9 |
epithelial cell of lower respiratory tract | 2.26e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 3.83e-10 | 120 |
nongranular leukocyte | 7.83e-09 | 115 |
leukocyte | 9.71e-09 | 136 |
hematopoietic oligopotent progenitor cell | 4.23e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.23e-07 | 161 |
hematopoietic stem cell | 9.97e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.42e-17 | 76 |
bone element | 1.24e-15 | 82 |
skeletal element | 4.26e-14 | 90 |
immune system | 1.37e-13 | 93 |
hematopoietic system | 8.26e-13 | 98 |
blood island | 8.26e-13 | 98 |
skeletal system | 1.61e-12 | 100 |
hemolymphoid system | 1.83e-11 | 108 |
musculoskeletal system | 8.86e-07 | 167 |