FFCP PHASE1:Hg19::chr12:31910006..31910040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:31910006..31910040,- | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr12:31910006..31910040,- | |description=CAGE_peak_at_chr12:31910006..31910040,- | ||
|id=chr12:31910006..31910040,- | |id=chr12:31910006..31910040,- | ||
|ontology_enrichment_celltype=CL:0000860!1.04e-27!45;CL:0002057!1.48e-27!42;CL:0002009!2.09e-19!65;CL:0002194!5.93e-18!63;CL:0000576!5.93e-18!63;CL:0000040!5.93e-18!63;CL:0000559!5.93e-18!63;CL:0000557!1.15e-16!71;CL:0000766!4.67e-16!76;CL:0000066!2.77e-15!254;CL:0000839!6.18e-15!70;CL:0002076!1.48e-11!43;CL:0000223!2.49e-10!59;CL:0000063!1.45e-09!578;CL:0000763!9.79e-09!112;CL:0000049!9.79e-09!112;CL:0002031!5.74e-07!124 | |ontology_enrichment_celltype=CL:0000860!1.04e-27!45;CL:0002057!1.48e-27!42;CL:0002009!2.09e-19!65;CL:0002194!5.93e-18!63;CL:0000576!5.93e-18!63;CL:0000040!5.93e-18!63;CL:0000559!5.93e-18!63;CL:0000557!1.15e-16!71;CL:0000766!4.67e-16!76;CL:0000066!2.77e-15!254;CL:0000839!6.18e-15!70;CL:0002076!1.48e-11!43;CL:0000223!2.49e-10!59;CL:0000063!1.45e-09!578;CL:0000763!9.79e-09!112;CL:0000049!9.79e-09!112;CL:0002031!5.74e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-40;33!CL:0002057;2.47e-40;33!CL:0000473;1.70e-26;39!CL:0000234;1.70e-26;39!CL:0000576;7.07e-19;48!CL:0000766;3.52e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.69e-36,42;CL:0002057,2.69e-36,42;CL:0000473,5.66e-31,48;CL:0000234,5.66e-31,48;CL:0002194,1.55e-23,59;CL:0000576,1.55e-23,59;CL:0000040,1.55e-23,59;CL:0000559,1.55e-23,59;CL:0002009,1.40e-22,61;CL:0000766,4.42e-22,72;CL:0000839,1.94e-20,66;CL:0000557,4.76e-20,67;CL:0000763,1.18e-12,108;CL:0000049,1.18e-12,108;CL:0002087,2.51e-10,115;CL:0000738,1.06e-09,136;CL:0002031,1.16e-09,120;CL:0002032,2.83e-07,161;CL:0000837,2.83e-07,161;CL:0000037,9.86e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;7.50e-26;42 | |||
|ontology_enrichment_disease=DOID:305!1.15e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.29e-14!80;UBERON:0001474!1.72e-12!86;UBERON:0002405!1.57e-10!115;UBERON:0002193!6.36e-10!112;UBERON:0002390!6.74e-10!102;UBERON:0003061!6.74e-10!102;UBERON:0004765!1.88e-09!101;UBERON:0001434!1.88e-09!101;UBERON:0000062!1.68e-08!511;UBERON:0004119!7.80e-08!169;UBERON:0000925!7.80e-08!169;UBERON:0006595!7.80e-08!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-18,76;UBERON:0002405,5.77e-17,93;UBERON:0001474,8.04e-17,82;UBERON:0004765,8.43e-15,90;UBERON:0002193,1.01e-13,108;UBERON:0002390,4.09e-13,98;UBERON:0003061,4.09e-13,98;UBERON:0001434,9.79e-13,100 | |||
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| ||
|short_description=p@chr12:31910006..31910040,- | |short_description=p@chr12:31910006..31910040,- | ||
}} | }} |
Latest revision as of 08:09, 24 July 2015
Short description: | p@chr12:31910006..31910040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31910006..31910040, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.69e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-36 | 42 |
defensive cell | 5.66e-31 | 48 |
phagocyte | 5.66e-31 | 48 |
monopoietic cell | 1.55e-23 | 59 |
monocyte | 1.55e-23 | 59 |
monoblast | 1.55e-23 | 59 |
promonocyte | 1.55e-23 | 59 |
macrophage dendritic cell progenitor | 1.40e-22 | 61 |
myeloid leukocyte | 4.42e-22 | 72 |
myeloid lineage restricted progenitor cell | 1.94e-20 | 66 |
granulocyte monocyte progenitor cell | 4.76e-20 | 67 |
myeloid cell | 1.18e-12 | 108 |
common myeloid progenitor | 1.18e-12 | 108 |
nongranular leukocyte | 2.51e-10 | 115 |
leukocyte | 1.06e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.16e-09 | 120 |
hematopoietic oligopotent progenitor cell | 2.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.83e-07 | 161 |
hematopoietic stem cell | 9.86e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-18 | 76 |
immune system | 5.77e-17 | 93 |
bone element | 8.04e-17 | 82 |
skeletal element | 8.43e-15 | 90 |
hemolymphoid system | 1.01e-13 | 108 |
hematopoietic system | 4.09e-13 | 98 |
blood island | 4.09e-13 | 98 |
skeletal system | 9.79e-13 | 100 |