FFCP PHASE1:Mm9::chr19:12707819..12707842,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107146 | |EntrezGene=107146 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XE0 | |UniProt=Q91XE0 | ||
|association_with_transcript=21bp_to_ENSMUST00000044976,NM_145935,uc008guh.1,uc008gui.1_5end | |association_with_transcript=21bp_to_ENSMUST00000044976,NM_145935,uc008guh.1,uc008gui.1_5end | ||
|cluster_id=chr19:12707819..12707842,+ | |||
|description=CAGE_peak_2_at_Glyat_5end | |description=CAGE_peak_2_at_Glyat_5end | ||
|id=chr19:12707819..12707842,+ | |id=chr19:12707819..12707842,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.67e-08!5;CL:0000417!2.67e-08!5;CL:0000668!2.67e-08!5;CL:0000412!2.67e-08!5;CL:0000182!2.67e-08!5 | |ontology_enrichment_celltype=CL:0000181!2.67e-08!5;CL:0000417!2.67e-08!5;CL:0000668!2.67e-08!5;CL:0000412!2.67e-08!5;CL:0000182!2.67e-08!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.53e-11,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.79e-20!22;UBERON:0007499!1.79e-20!22;UBERON:0006925!1.79e-20!22;UBERON:0009497!1.79e-20!22;UBERON:0000015!1.79e-20!22;UBERON:0002423!1.79e-20!22;UBERON:0006235!1.79e-20!22;UBERON:0008835!1.79e-20!22;UBERON:0003894!1.79e-20!22;UBERON:0004161!1.79e-20!22;UBERON:0008836!1.79e-20!22;UBERON:0009854!2.47e-19!23;UBERON:0009856!2.47e-19!23;UBERON:0002365!2.48e-17!25;UBERON:0002330!2.48e-17!25;UBERON:0005172!4.43e-17!49;UBERON:0005173!4.43e-17!49;UBERON:0002417!4.43e-17!49;UBERON:0000916!4.43e-17!49;UBERON:0009569!7.54e-15!66;UBERON:0005177!2.37e-12!85;UBERON:0002100!1.82e-09!98;UBERON:0005256!1.48e-07!47;UBERON:0003914!9.00e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.54e-25,22;UBERON:0007499,7.54e-25,22;UBERON:0006925,7.54e-25,22;UBERON:0009497,7.54e-25,22;UBERON:0000015,7.54e-25,22;UBERON:0002423,7.54e-25,22;UBERON:0006235,7.54e-25,22;UBERON:0008835,7.54e-25,22;UBERON:0003894,7.54e-25,22;UBERON:0004161,7.54e-25,22;UBERON:0008836,7.54e-25,22;UBERON:0005172,1.74e-24,49;UBERON:0005173,1.74e-24,49;UBERON:0002417,1.74e-24,49;UBERON:0000916,1.74e-24,49;UBERON:0009854,1.18e-23,23;UBERON:0009856,1.18e-23,23;UBERON:0002365,1.49e-21,25;UBERON:0002330,1.49e-21,25;UBERON:0003104,6.74e-19,61;UBERON:0009142,6.74e-19,61;UBERON:0009569,3.63e-17,66;UBERON:0005177,1.09e-13,79;UBERON:0002100,1.58e-11,90;UBERON:0005256,8.19e-11,45;UBERON:0002113,1.06e-10,14;UBERON:0003918,1.06e-10,14;UBERON:0011143,1.06e-10,14;UBERON:0005095,1.06e-10,14;UBERON:0007687,1.06e-10,14;UBERON:0003914,3.05e-10,47;UBERON:0000489,8.80e-09,21;UBERON:0003929,2.24e-08,55;UBERON:0006554,3.96e-08,18;UBERON:0001008,1.18e-07,19;UBERON:0002368,1.82e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0.22940928106717,0,0,0,1.71021077510736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,3.44169550792555,7.47968467078526,5.39703191637817,5.19821133958135,12.9927797258227,4.0728881838208,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,3.08296475241462,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0,0.760902504450237,0,0.823494773620054,1.50801125280162,0.994782360205754,0.38992817423824,0,0,0,0,0.114248512609729,0,1.62921062276251,1.74557238450863,3.36651935473529,4.48979413582227,7.38050739898011,3.29697328466887,13.2034965396327,7.41131567717872,0,0,0,0,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,9.60964946158285,23.0029130443767,23.8170206507842,14.6657706363843,13.8918382870911,12.19902411949,9.16642690590398,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,1.65306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0.22940928106717,0,0,0,1.71021077510736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,3.44169550792555,7.47968467078526,5.39703191637817,5.19821133958135,12.9927797258227,4.0728881838208,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,3.08296475241462,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0,0.760902504450237,0,0.823494773620054,1.50801125280162,0.994782360205754,0.38992817423824,0,0,0,0,0.114248512609729,0,1.62921062276251,1.74557238450863,3.36651935473529,4.48979413582227,7.38050739898011,3.29697328466887,13.2034965396327,7.41131567717872,0,0,0,0,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,9.60964946158285,23.0029130443767,23.8170206507842,14.6657706363843,13.8918382870911,12.19902411949,9.16642690590398,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,1.65306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p2@Glyat | |short_description=p2@Glyat | ||
}} | }} |
Latest revision as of 22:32, 1 October 2015
Short description: | p2@Glyat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Glyat_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 21bp_to_ENSMUST00000044976, NM_145935, uc008guh.1, uc008gui.1_5end |
EntrezGene: | Glyat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.53e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 7.54e-25 | 22 |
epithelial sac | 7.54e-25 | 22 |
digestive gland | 7.54e-25 | 22 |
epithelium of foregut-midgut junction | 7.54e-25 | 22 |
anatomical boundary | 7.54e-25 | 22 |
hepatobiliary system | 7.54e-25 | 22 |
foregut-midgut junction | 7.54e-25 | 22 |
hepatic diverticulum | 7.54e-25 | 22 |
liver primordium | 7.54e-25 | 22 |
septum transversum | 7.54e-25 | 22 |
liver bud | 7.54e-25 | 22 |
abdomen element | 1.74e-24 | 49 |
abdominal segment element | 1.74e-24 | 49 |
abdominal segment of trunk | 1.74e-24 | 49 |
abdomen | 1.74e-24 | 49 |
digestive tract diverticulum | 1.18e-23 | 23 |
sac | 1.18e-23 | 23 |
exocrine gland | 1.49e-21 | 25 |
exocrine system | 1.49e-21 | 25 |
mesenchyme | 6.74e-19 | 61 |
entire embryonic mesenchyme | 6.74e-19 | 61 |
subdivision of trunk | 3.63e-17 | 66 |
trunk region element | 1.09e-13 | 79 |
trunk | 1.58e-11 | 90 |
trunk mesenchyme | 8.19e-11 | 45 |
kidney | 1.06e-10 | 14 |
kidney mesenchyme | 1.06e-10 | 14 |
upper urinary tract | 1.06e-10 | 14 |
kidney rudiment | 1.06e-10 | 14 |
kidney field | 1.06e-10 | 14 |
epithelial tube | 3.05e-10 | 47 |
cavitated compound organ | 8.80e-09 | 21 |
gut epithelium | 2.24e-08 | 55 |
urinary system structure | 3.96e-08 | 18 |
renal system | 1.18e-07 | 19 |
endocrine gland | 1.82e-07 | 60 |