FFCP PHASE1:Mm9::chr19:9045050..9045055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3218 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9045050..9045055,+ | |||
|description=CAGE_peak_at_chr19:9045050..9045055,+ | |description=CAGE_peak_at_chr19:9045050..9045055,+ | ||
|id=chr19:9045050..9045055,+ | |id=chr19:9045050..9045055,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.04e-07,8;CL:0000893,2.25e-07,6;CL:0002489,2.25e-07,6;CL:0000898,2.25e-07,6;CL:0000809,2.25e-07,6;CL:0000810,2.25e-07,6;CL:0000895,2.25e-07,6;CL:0000808,2.25e-07,6;CL:0000894,2.25e-07,6;CL:0000806,2.25e-07,6;CL:0000807,2.25e-07,6;CL:0000805,2.25e-07,6;CL:0002425,2.25e-07,6;CL:0002436,2.25e-07,6;CL:0002427,2.25e-07,6;CL:0002428,2.25e-07,6;CL:0002429,2.25e-07,6;CL:0002433,2.25e-07,6;CL:0002431,2.25e-07,6;CL:0002432,2.25e-07,6;CL:0000791,9.63e-07,9;CL:0000789,9.63e-07,9;CL:0002420,9.63e-07,9;CL:0002419,9.63e-07,9;CL:0000790,9.63e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0.320297694209588,0,0,0.90739263392049,0.500895729946347,0.503637815735669,1.63528848416868,6.45616617207881,1.12630977721333,17.3207749478275,1.71217968225505,15.8746596400719,0.856003649656029,6.29426897416781,0.333109761815663,1.01237633694913,0,0.315462165358238,0.685572168028694,1.69755860719212,3.14660173558958,0.893618560807968,0.261199789138935,2.71987118748791,1.83527424853736,0,0,0.430942465371778,1.52018735565099,2.01624103807945,3.32595765982957,0,0,0,0,0,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,5.79125362687656,4.46058497365864,9.17733760808408,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0.503347818173209,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,1.34796496001021,0.945041568321835,0.630974884054146,0,0,0.489963196859816,1.0543001812006,1.83843757322004,1.10115880999389,0.510749352340751,0.153606533256243,0.131886287730194,0.640413505216868,0.52091337055676,0,0,0.763991238884051,0.589257170947335,0.569486723196412,0.372798891650601,0.984440513331393,0.755715601067855,0,0,0.679971333707751,0,0,0,0.983110940922263,2.55645483867087,7.27400812888033,3.88673531961374,0.281686839553361,2.56652954828636,2.54805239706646,14.2213340630666,0,0.506719730950197,0.505524445014783,2.74041311325744,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.753613202763113,0.352766121407114,0.376999773989026,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.41889341362691,0.510914110417183,0.479260498023681,0,0.508280908292259,0.149790639404823,0,0.753926112677186,0,0.255715457330331,0.20778804455956,0.648965052271031,0.509196819251581,0.124406970610093,0.758168275301024,0.210441855886474,0.650602214813519,0.229902104433473,0.180062129805349,0.60281927134286,0.408218994907967,0.640568601424249,0.187403449119458,0,0,0.189106080167819,0.703804496655795,0,1.39023624612799,0,0.823128545631774,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.232533944750408,0,0.817357396570186,0.493679549740441,0.656669856316381,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.420579897128254,0.205809224758569,0.660837565967596,3.96675849995316,0.853153002140936,0.464473343720877,0.902072229254653,0,0.22237804384487,0.760902504450237,0,0.494096864172033,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,1.25673363870702,0,1.01825663922657,0.969762435838129,0.420814919341911,0.379419222745544,0.295220295959204,0.627994911365499,0.246794327843601,0.296452627087149,0,0.393117990226406,0.899448449539415,0.202860121388503,0.72353147925725,0.763877555344259,0.287696137450811,0.648540907100142,0.274561413188081,4.31304619582064,0,1.5601883655728,0.505157755894224,0.538192240565737,0,0.369506380333209,0.189491411770485,0.488894929326078,0.678980343100753,0.704070744865506,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,1.55025282754142,0.478364305972461,0.163863314715738,1.03610989119537,0.144649058581512,7.53956419696361,12.5098307278303,0.983528546038072,0.275936746304732,0.160550589987792,0.468846746368813,0.163934945376675,1.00988370881749,1.89304931649754,1.17131623288992,0.430846795465598,0.716906393857656,0.668396022247182,1.13230612315533,0.404810701674894,0.584511715822624,0.790575555893047,0.321321316421807,0.283880170416537,0.890328018336276,0.651547837414304,0.164970122972535,1.32745138339963,0.242780636154981,0.906970670894253,1.69744571780308,0,1.53717573971964,1.55056975900933,0.363533729477506,2.13898427030833,1.58018378967908,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,0.23467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0.238744688006273,0.492422699235184,0.582961673259701,0,0.170870880797853,0.412773735926445,0.925972636848558,1.50694765603753,0.820165366326151,0.457556346413045,0,0.419854356970974,0.414599921413271,1.90934123603023,0.949007980743406,0.406638934253697,0.756037385752609,0.836353184057875,1.09181281873089,0.539457385539283,0.495920734352016,0.785267825952089,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.516639293910924,1.18269287843545,0.352071715937262,0.13020438484395,0.943734099831398,0.241584120826006,0,0.632022241256357,0.810900861160657,1.23253148597793,0.909445760844565,0.537080087002444,0.596044064343795,0.721172697119813,0.295379054349154,1.00966449948148,0.228620419965,0.504130925684203,0.38983152295901,0.192423683280659,0.116876902181569,0.226730383615211,2.21985953374065,0.986852422704233,0,0.19318959403219,0.750729901804728,0,0.643105137237198,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,0.517760311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| ||
|short_description=p@chr19:9045050..9045055,+ | |short_description=p@chr19:9045050..9045055,+ | ||
}} | }} |
Latest revision as of 14:21, 4 August 2015
Short description: | p@chr19:9045050..9045055, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:9045050..9045055, + |
Coexpression cluster: | MCL_coexpression_mm9:3218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.04e-07 | 8 |
thymocyte | 2.25e-07 | 6 |
double negative thymocyte | 2.25e-07 | 6 |
naive T cell | 2.25e-07 | 6 |
double-positive, alpha-beta thymocyte | 2.25e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 2.25e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.25e-07 | 6 |
DN4 thymocyte | 2.25e-07 | 6 |
DN1 thymic pro-T cell | 2.25e-07 | 6 |
DN2 thymocyte | 2.25e-07 | 6 |
DN3 thymocyte | 2.25e-07 | 6 |
immature single positive thymocyte | 2.25e-07 | 6 |
early T lineage precursor | 2.25e-07 | 6 |
mature CD4 single-positive thymocyte | 2.25e-07 | 6 |
resting double-positive thymocyte | 2.25e-07 | 6 |
double-positive blast | 2.25e-07 | 6 |
CD69-positive double-positive thymocyte | 2.25e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 2.25e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.25e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 2.25e-07 | 6 |
mature alpha-beta T cell | 9.63e-07 | 9 |
alpha-beta T cell | 9.63e-07 | 9 |
immature T cell | 9.63e-07 | 9 |
mature T cell | 9.63e-07 | 9 |
immature alpha-beta T cell | 9.63e-07 | 9 |