FFCP PHASE1:Mm9::chr10:87819735..87819867,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71712 | |EntrezGene=71712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DC58,D6RJL8 | |UniProt=Q9DC58,D6RJL8 | ||
|association_with_transcript=0bp_to_ENSMUST00000020249,ENSMUST00000156097,NM_027878,uc007grj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000020249,ENSMUST00000156097,NM_027878,uc007grj.1_5end | ||
|cluster_id=chr10:87819735..87819867,- | |||
|description=CAGE_peak_1_at_Dram1_5end | |description=CAGE_peak_1_at_Dram1_5end | ||
|id=chr10:87819735..87819867,- | |id=chr10:87819735..87819867,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.82e-11!193;UBERON:0004120!4.82e-11!193;UBERON:0006603!4.82e-11!193;UBERON:0000464!1.96e-10!57;UBERON:0003104!6.53e-10!131;UBERON:0009142!6.53e-10!131;UBERON:0005178!8.97e-10!17;UBERON:0005181!8.97e-10!17;UBERON:0002224!8.97e-10!17;UBERON:0000915!8.97e-10!17;UBERON:0008947!8.97e-10!17;UBERON:0003258!8.97e-10!17;UBERON:0005153!9.53e-09!17;UBERON:0002048!1.05e-08!14;UBERON:0000117!1.05e-08!14;UBERON:0000171!1.05e-08!14;UBERON:0000170!1.05e-08!14;UBERON:0005597!1.05e-08!14;UBERON:0000118!1.05e-08!14;UBERON:0000077!7.90e-08!97;UBERON:0002100!6.08e-07!98;UBERON:0001041!7.45e-07!92;UBERON:0000466!9.04e-07!79 | |ontology_enrichment_uberon=UBERON:0000926!4.82e-11!193;UBERON:0004120!4.82e-11!193;UBERON:0006603!4.82e-11!193;UBERON:0000464!1.96e-10!57;UBERON:0003104!6.53e-10!131;UBERON:0009142!6.53e-10!131;UBERON:0005178!8.97e-10!17;UBERON:0005181!8.97e-10!17;UBERON:0002224!8.97e-10!17;UBERON:0000915!8.97e-10!17;UBERON:0008947!8.97e-10!17;UBERON:0003258!8.97e-10!17;UBERON:0005153!9.53e-09!17;UBERON:0002048!1.05e-08!14;UBERON:0000117!1.05e-08!14;UBERON:0000171!1.05e-08!14;UBERON:0000170!1.05e-08!14;UBERON:0005597!1.05e-08!14;UBERON:0000118!1.05e-08!14;UBERON:0000077!7.90e-08!97;UBERON:0002100!6.08e-07!98;UBERON:0001041!7.45e-07!92;UBERON:0000466!9.04e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.75e-10,90;UBERON:0005178,6.32e-10,17;UBERON:0005181,6.32e-10,17;UBERON:0002224,6.32e-10,17;UBERON:0000915,6.32e-10,17;UBERON:0008947,6.32e-10,17;UBERON:0003258,6.32e-10,17;UBERON:0005153,7.01e-09,17;UBERON:0002048,7.72e-09,14;UBERON:0000117,7.72e-09,14;UBERON:0000171,7.72e-09,14;UBERON:0000170,7.72e-09,14;UBERON:0005597,7.72e-09,14;UBERON:0000118,7.72e-09,14;UBERON:0005177,8.66e-07,79 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,2.81577444303333,1.40438715793196,1.54096171402954,0.717949430958028,0,0.0874204024189974,2.99798785634096,1.41732687172878,2.79824751251259,1.73504190947031,1.64537320326887,1.69755860719212,46.348593132333,0.397163804803541,0,1.11994695955385,1.83527424853736,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,64.4538711334838,53.1308034276184,60.7287543009606,104.705204869521,95.6263678941824,91.761456722888,56.5276712710342,60.0151432819526,40.930925732055,2.34717403304412,8.72100625521786,5.05278220289285,5.44403717407994,3.21968769738334,4.31257693094915,0.335565212115473,0,0.336093799142464,12.3484529297255,19.7708073557742,12.3761302146586,0.202316460859598,0,0,5.76035704517525,3.55717918444456,54.4439328955246,88.0091062684607,57.5488893106341,11.6844043102178,4.2264013585371,0.518448061542388,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0,3.48340489332647,10.8067330952703,2.02905142091174,2.58127163094416,0,0,0.649776417447669,0,14.0444420131752,26.416699999599,20.2633083590238,22.2603931941514,0,64.1632387071589,101.922095882658,85.3280043783997,23.8140145112336,17.7351905832569,18.1988800205322,11.0758363327488,67.5827876319118,21.5241101643996,0.867426633830679,3.34912026143355,4.38169444786511,3.3158980921577,5.76184664964954,13.571991863605,14.5845030963281,50.8989736358089,17.6922110389975,9.22071044700232,10.6003928860989,6.78825354389311,3.72783522436244,0,0,4.08731288333746,5.03223522924865,5.39912457894067,7.87835407853001,0.149790639404823,0.457500602818626,0.125654352112864,1.04294592115366,0.511430914660661,0.62336413367868,0.486723789203273,7.53611292492341,17.5413828560231,4.54900965180614,2.52530227063769,0.260240885925407,0.459804208866946,0.540186389416048,0.452114453507145,1.97305847538851,0.768682321709099,0.749613796477831,1.81092359517311,0,1.13463648100692,0.703804496655795,0.876782929710299,1.11218899690239,3.83077383174383,3.70407845534298,0.199034266818493,9.12877143507205,13.3820911699652,22.1647529528562,0.414251545071004,0.234526059981096,0.900310307305074,1.89395788468168,0.787056926989615,1.85120535464854,2.09280550275367,4.56064782379353,2.10177616260905,3.45575684818309,3.77585167381919,3.89130285820108,4.5321996101853,9.87975518809728,5.63666958793561,0.630869845692382,0.720332286654991,1.65209391491899,3.17340679996253,1.06644125267617,2.55460339046482,2.06187938115349,3.02525286935014,2.66853652613844,4.75564065281398,5.21981967698963,3.45867804920423,2.5133520880027,5.57078121715222,3.8992817423824,6.29173586057955,4.32276099749388,5.57595565112228,0.379335801906163,1.02823661348756,0,2.44381593414377,2.13347735884388,3.64706263429657,7.8413306034079,13.1373031701846,14.4438829614065,12.3397163921801,1.1858105083486,0.667380422864376,0.786235980452812,2.02375901146368,3.44862206360455,5.54707467430559,10.1850340712568,26.4680446454746,11.3494658742525,5.49122826376163,8.62609239164127,19.7234702264307,2.49630138491648,2.77836765741823,3.04975602987251,2.41221760681684,311.678631811062,1.89491411770485,20.2076570788112,37.6834090420918,94.3454798119779,168.511294986467,298.268682030175,309.872232798185,219.428120595818,230.766206614023,187.040443635232,244.484065555881,279.231615677153,375.942903253349,123.648852830203,225.176953100946,16.7199852826472,18.7636987487218,0.963303539926752,0.468846746368813,12.131185957874,10.6037789425837,1.26203287766503,0,1.93881057959519,1.91175038362042,3.11918143715352,2.54768877709949,3.64329631507405,1.46127928955656,1.97643888973262,0,20.2974321847824,5.69809931735217,6.35259141478947,14.1874305756381,27.8764790513922,8.74010290157933,14.8138542912728,20.5579536933929,18.0134154657271,16.6014979889721,18.3484088149437,25.0838273339479,21.0333453246986,24.6508671189936,22.1379078007497,23.721174947083,2.38307724027652,0.36012218806262,0.388076051348264,0.857348140126369,1.59606210278046,1.42695054081656,2.63278432963394,1.8267896946876,10.560226862867,34.3167954799389,2.8668691747145,26.0520279647538,13.8859406958479,19.0588842772972,12.7728408083356,7.38634048852776,5.24665505933731,0.741701208042039,11.7900907750518,5.36605856704379,5.37064129372164,6.78126445216888,5.33107488111998,9.60868327467395,1.86976272993241,2.37917468950219,2.3493995546752,7.63736494412091,0.474503990371703,5.08298667817122,4.96824567780286,5.01811910434725,5.24070152990826,5.12484516262319,4.79390043206948,4.4498510137285,6.09190374471426,5.59205381778233,33.2578833823672,1.04661582230785,0.330916980914195,1.94451188344048,2.58319646955462,2.70329800785245,3.87278887530988,2.99470085141085,2.62148361064277,5.55643477899814,32.8354207133967,11.3764003426144,2.02725215290164,6.47079030138412,6.10627867995637,6.62398773969681,4.96703386953162,6.97133607215819,7.97523446742717,4.54349024766664,5.71551049912499,6.45287584875779,7.60171469770069,4.52195655709548,6.19447581562315,10.8830584135301,9.76738194845885,24.7610244242153,8.39423081820392,16.227925898704,12.1993609043268,7.69236821922513,57.8794623513478,4.51414893631827,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0.103787347584177,1.19707462020309,1.19513524027894,3.8897074730927,0.838452650511929,5.88299227040045,14.0015438515018,12.3621034343337,15.7250412699989,13.8983466470089,11.9135270948413,18.6740077972215,14.5144336578318,17.4788666065293,15.737318493838,14.2888107384922,11.9360855723201,14.4681915347779,13.1867488257058,10.4511233295422,17.1434626192708,12.9557338496316,10.9680647375768,15.6974129962915,13.9281883014689,15.9921608915269,13.9025259383307,18.1518100892112,16.703906003041,16.2731258780744,13.4057570480317,13.3966096030766,14.3230865109391,15.3387472774106,14.8538090455479,4.99621155875892,18.2466654587419,18.9086527562503,12.0511649203371,14.3384422427685,8.34724208233517 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,2.81577444303333,1.40438715793196,1.54096171402954,0.717949430958028,0,0.0874204024189974,2.99798785634096,1.41732687172878,2.79824751251259,1.73504190947031,1.64537320326887,1.69755860719212,46.348593132333,0.397163804803541,0,1.11994695955385,1.83527424853736,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,64.4538711334838,53.1308034276184,60.7287543009606,104.705204869521,95.6263678941824,91.761456722888,56.5276712710342,60.0151432819526,40.930925732055,2.34717403304412,8.72100625521786,5.05278220289285,5.44403717407994,3.21968769738334,4.31257693094915,0.335565212115473,0,0.336093799142464,12.3484529297255,19.7708073557742,12.3761302146586,0.202316460859598,0,0,5.76035704517525,3.55717918444456,54.4439328955246,88.0091062684607,57.5488893106341,11.6844043102178,4.2264013585371,0.518448061542388,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0,3.48340489332647,10.8067330952703,2.02905142091174,2.58127163094416,0,0,0.649776417447669,0,14.0444420131752,26.416699999599,20.2633083590238,22.2603931941514,0,64.1632387071589,101.922095882658,85.3280043783997,23.8140145112336,17.7351905832569,18.1988800205322,11.0758363327488,67.5827876319118,21.5241101643996,0.867426633830679,3.34912026143355,4.38169444786511,3.3158980921577,5.76184664964954,13.571991863605,14.5845030963281,50.8989736358089,17.6922110389975,9.22071044700232,10.6003928860989,6.78825354389311,3.72783522436244,0,0,4.08731288333746,5.03223522924865,5.39912457894067,7.87835407853001,0.149790639404823,0.457500602818626,0.125654352112864,1.04294592115366,0.511430914660661,0.62336413367868,0.486723789203273,7.53611292492341,17.5413828560231,4.54900965180614,2.52530227063769,0.260240885925407,0.459804208866946,0.540186389416048,0.452114453507145,1.97305847538851,0.768682321709099,0.749613796477831,1.81092359517311,0,1.13463648100692,0.703804496655795,0.876782929710299,1.11218899690239,3.83077383174383,3.70407845534298,0.199034266818493,9.12877143507205,13.3820911699652,22.1647529528562,0.414251545071004,0.234526059981096,0.900310307305074,1.89395788468168,0.787056926989615,1.85120535464854,2.09280550275367,4.56064782379353,2.10177616260905,3.45575684818309,3.77585167381919,3.89130285820108,4.5321996101853,9.87975518809728,5.63666958793561,0.630869845692382,0.720332286654991,1.65209391491899,3.17340679996253,1.06644125267617,2.55460339046482,2.06187938115349,3.02525286935014,2.66853652613844,4.75564065281398,5.21981967698963,3.45867804920423,2.5133520880027,5.57078121715222,3.8992817423824,6.29173586057955,4.32276099749388,5.57595565112228,0.379335801906163,1.02823661348756,0,2.44381593414377,2.13347735884388,3.64706263429657,7.8413306034079,13.1373031701846,14.4438829614065,12.3397163921801,1.1858105083486,0.667380422864376,0.786235980452812,2.02375901146368,3.44862206360455,5.54707467430559,10.1850340712568,26.4680446454746,11.3494658742525,5.49122826376163,8.62609239164127,19.7234702264307,2.49630138491648,2.77836765741823,3.04975602987251,2.41221760681684,311.678631811062,1.89491411770485,20.2076570788112,37.6834090420918,94.3454798119779,168.511294986467,298.268682030175,309.872232798185,219.428120595818,230.766206614023,187.040443635232,244.484065555881,279.231615677153,375.942903253349,123.648852830203,225.176953100946,16.7199852826472,18.7636987487218,0.963303539926752,0.468846746368813,12.131185957874,10.6037789425837,1.26203287766503,0,1.93881057959519,1.91175038362042,3.11918143715352,2.54768877709949,3.64329631507405,1.46127928955656,1.97643888973262,0,20.2974321847824,5.69809931735217,6.35259141478947,14.1874305756381,27.8764790513922,8.74010290157933,14.8138542912728,20.5579536933929,18.0134154657271,16.6014979889721,18.3484088149437,25.0838273339479,21.0333453246986,24.6508671189936,22.1379078007497,23.721174947083,2.38307724027652,0.36012218806262,0.388076051348264,0.857348140126369,1.59606210278046,1.42695054081656,2.63278432963394,1.8267896946876,10.560226862867,34.3167954799389,2.8668691747145,26.0520279647538,13.8859406958479,19.0588842772972,12.7728408083356,7.38634048852776,5.24665505933731,0.741701208042039,11.7900907750518,5.36605856704379,5.37064129372164,6.78126445216888,5.33107488111998,9.60868327467395,1.86976272993241,2.37917468950219,2.3493995546752,7.63736494412091,0.474503990371703,5.08298667817122,4.96824567780286,5.01811910434725,5.24070152990826,5.12484516262319,4.79390043206948,4.4498510137285,6.09190374471426,5.59205381778233,33.2578833823672,1.04661582230785,0.330916980914195,1.94451188344048,2.58319646955462,2.70329800785245,3.87278887530988,2.99470085141085,2.62148361064277,5.55643477899814,32.8354207133967,11.3764003426144,2.02725215290164,6.47079030138412,6.10627867995637,6.62398773969681,4.96703386953162,6.97133607215819,7.97523446742717,4.54349024766664,5.71551049912499,6.45287584875779,7.60171469770069,4.52195655709548,6.19447581562315,10.8830584135301,9.76738194845885,24.7610244242153,8.39423081820392,16.227925898704,12.1993609043268,7.69236821922513,57.8794623513478,4.51414893631827,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0.103787347584177,1.19707462020309,1.19513524027894,3.8897074730927,0.838452650511929,5.88299227040045,14.0015438515018,12.3621034343337,15.7250412699989,13.8983466470089,11.9135270948413,18.6740077972215,14.5144336578318,17.4788666065293,15.737318493838,14.2888107384922,11.9360855723201,14.4681915347779,13.1867488257058,10.4511233295422,17.1434626192708,12.9557338496316,10.9680647375768,15.6974129962915,13.9281883014689,15.9921608915269,13.9025259383307,18.1518100892112,16.703906003041,16.2731258780744,13.4057570480317,13.3966096030766,14.3230865109391,15.3387472774106,14.8538090455479,4.99621155875892,18.2466654587419,18.9086527562503,12.0511649203371,14.3384422427685,8.34724208233517 | ||
|short_description=p1@Dram1 | |short_description=p1@Dram1 | ||
}} | }} |
Latest revision as of 13:31, 26 September 2015
Short description: | p1@Dram1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dram1_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 0bp_to_ENSMUST00000020249, ENSMUST00000156097, NM_027878, uc007grj.1_5end |
EntrezGene: | Dram1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 3.75e-10 | 90 |
thoracic cavity element | 6.32e-10 | 17 |
thoracic segment organ | 6.32e-10 | 17 |
thoracic cavity | 6.32e-10 | 17 |
thoracic segment of trunk | 6.32e-10 | 17 |
respiratory primordium | 6.32e-10 | 17 |
endoderm of foregut | 6.32e-10 | 17 |
epithelial bud | 7.01e-09 | 17 |
lung | 7.72e-09 | 14 |
respiratory tube | 7.72e-09 | 14 |
respiration organ | 7.72e-09 | 14 |
pair of lungs | 7.72e-09 | 14 |
lung primordium | 7.72e-09 | 14 |
lung bud | 7.72e-09 | 14 |
trunk region element | 8.66e-07 | 79 |