FFCP PHASE1:Mm9::chr11:58191043..58191048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58191043..58191048,+ | |||
|description=CAGE_peak_at_chr11:58191043..58191048,+ | |description=CAGE_peak_at_chr11:58191043..58191048,+ | ||
|id=chr11:58191043..58191048,+ | |id=chr11:58191043..58191048,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.02e-13!9;CL:0002251!7.02e-13!9;CL:0000239!8.50e-09!6;CL:0000677!8.50e-09!6;CL:0000212!8.50e-09!6;CL:0000584!8.50e-09!6;CL:0000075!2.11e-07!7;CL:0002076!6.90e-07!15 | |ontology_enrichment_celltype=CL:0002563!7.02e-13!9;CL:0002251!7.02e-13!9;CL:0000239!8.50e-09!6;CL:0000677!8.50e-09!6;CL:0000212!8.50e-09!6;CL:0000584!8.50e-09!6;CL:0000075!2.11e-07!7;CL:0002076!6.90e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.28e-12,9;CL:0002251,2.28e-12,9;CL:0002250,4.51e-10,3;CL:0002076,3.47e-07,15;CL:0000066,5.60e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.67e-30!59;UBERON:0000160!4.30e-29!43;UBERON:0000344!2.97e-21!15;UBERON:0001242!1.75e-18!13;UBERON:0000060!1.75e-18!13;UBERON:0001262!1.75e-18!13;UBERON:0004786!1.75e-18!13;UBERON:0003350!7.02e-13!9;UBERON:0004808!7.02e-13!9;UBERON:0001277!7.02e-13!9;UBERON:0001007!1.10e-11!128;UBERON:0001555!1.10e-11!128;UBERON:0007026!1.10e-11!128;UBERON:0004923!1.27e-11!24;UBERON:0004119!2.51e-11!130;UBERON:0000925!2.51e-11!130;UBERON:0006595!2.51e-11!130;UBERON:0004921!2.92e-10!126;UBERON:0004185!2.92e-10!126;UBERON:0000485!3.82e-10!11 | |ontology_enrichment_uberon=UBERON:0005409!4.67e-30!59;UBERON:0000160!4.30e-29!43;UBERON:0000344!2.97e-21!15;UBERON:0001242!1.75e-18!13;UBERON:0000060!1.75e-18!13;UBERON:0001262!1.75e-18!13;UBERON:0004786!1.75e-18!13;UBERON:0003350!7.02e-13!9;UBERON:0004808!7.02e-13!9;UBERON:0001277!7.02e-13!9;UBERON:0001007!1.10e-11!128;UBERON:0001555!1.10e-11!128;UBERON:0007026!1.10e-11!128;UBERON:0004923!1.27e-11!24;UBERON:0004119!2.51e-11!130;UBERON:0000925!2.51e-11!130;UBERON:0006595!2.51e-11!130;UBERON:0004921!2.92e-10!126;UBERON:0004185!2.92e-10!126;UBERON:0000485!3.82e-10!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.67e-51,31;UBERON:0005409,8.01e-36,47;UBERON:0000344,1.92e-28,15;UBERON:0001242,5.53e-23,13;UBERON:0001262,5.53e-23,13;UBERON:0004786,5.53e-23,13;UBERON:0004923,6.40e-17,24;UBERON:0001007,1.76e-14,116;UBERON:0001555,1.76e-14,116;UBERON:0007026,1.76e-14,116;UBERON:0004119,3.73e-14,118;UBERON:0000925,3.73e-14,118;UBERON:0006595,3.73e-14,118;UBERON:0002108,7.87e-13,4;UBERON:0003350,2.28e-12,9;UBERON:0004808,2.28e-12,9;UBERON:0001277,2.28e-12,9;UBERON:0004921,4.15e-12,114;UBERON:0000331,3.13e-10,3;UBERON:0002116,3.13e-10,3;UBERON:0001204,3.13e-10,3;UBERON:0001168,3.13e-10,3;UBERON:0000485,5.16e-10,11;UBERON:0001155,3.40e-08,2;UBERON:0000059,3.40e-08,2;UBERON:0001962,3.27e-07,2;UBERON:0001961,3.27e-07,2;UBERON:0001744,3.27e-07,2 | |||
|phase1_expression=0,1.74487703819681,0.909998478779072,2.11724947914781,0.500895729946347,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,2.06468352960453,1.14846392823004,0.86152399231815,1.72376986148711,1.71021077510736,1.26015064879965,1.77384408524244,0,0,0,1.1554064790051,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0.464473343720877,0.77320476793256,3.83198696784351,1.77902435075896,3.61428689613862,1.42358718463353,1.15289268306808,0.754005626400808,1.1937388322469,1.75467678407208,0.898819408654221,3.45820879799511,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.432021363287205,0.627264888043406,0.87345025498471,0.404593039154462,0.165306911450672,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,1.74487703819681,0.909998478779072,2.11724947914781,0.500895729946347,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,2.06468352960453,1.14846392823004,0.86152399231815,1.72376986148711,1.71021077510736,1.26015064879965,1.77384408524244,0,0,0,1.1554064790051,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0.464473343720877,0.77320476793256,3.83198696784351,1.77902435075896,3.61428689613862,1.42358718463353,1.15289268306808,0.754005626400808,1.1937388322469,1.75467678407208,0.898819408654221,3.45820879799511,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.432021363287205,0.627264888043406,0.87345025498471,0.404593039154462,0.165306911450672,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr11:58191043..58191048,+ | |short_description=p@chr11:58191043..58191048,+ | ||
}} | }} |
Latest revision as of 04:06, 6 August 2015
Short description: | p@chr11:58191043..58191048, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58191043..58191048, + |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.28e-12 | 9 |
epithelial cell of alimentary canal | 2.28e-12 | 9 |
intestinal crypt stem cell | 4.51e-10 | 3 |
endo-epithelial cell | 3.47e-07 | 15 |
epithelial cell | 5.60e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.67e-51 | 31 |
gastrointestinal system | 8.01e-36 | 47 |
mucosa | 1.92e-28 | 15 |
intestinal mucosa | 5.53e-23 | 13 |
wall of intestine | 5.53e-23 | 13 |
gastrointestinal system mucosa | 5.53e-23 | 13 |
organ component layer | 6.40e-17 | 24 |
digestive system | 1.76e-14 | 116 |
digestive tract | 1.76e-14 | 116 |
primitive gut | 1.76e-14 | 116 |
endoderm-derived structure | 3.73e-14 | 118 |
endoderm | 3.73e-14 | 118 |
presumptive endoderm | 3.73e-14 | 118 |
small intestine | 7.87e-13 | 4 |
epithelium of mucosa | 2.28e-12 | 9 |
gastrointestinal system epithelium | 2.28e-12 | 9 |
intestinal epithelium | 2.28e-12 | 9 |
subdivision of digestive tract | 4.15e-12 | 114 |
ileal mucosa | 3.13e-10 | 3 |
ileum | 3.13e-10 | 3 |
mucosa of small intestine | 3.13e-10 | 3 |
wall of small intestine | 3.13e-10 | 3 |
simple columnar epithelium | 5.16e-10 | 11 |
colon | 3.40e-08 | 2 |
large intestine | 3.40e-08 | 2 |
gut-associated lymphoid tissue | 3.27e-07 | 2 |
mucosa-associated lymphoid tissue | 3.27e-07 | 2 |
lymphoid tissue | 3.27e-07 | 2 |