FFCP PHASE1:Mm9::chr2:103810335..103810349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16909 | |EntrezGene=16909 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=512 | |||
|TSSclassifier=NA | |||
|UniProt=A2BHP3 | |UniProt=A2BHP3 | ||
|association_with_transcript=-30bp_to_ENSMUST00000111140_5end | |association_with_transcript=-30bp_to_ENSMUST00000111140_5end | ||
|cluster_id=chr2:103810335..103810349,+ | |||
|description=CAGE_peak_10_at_Lmo2_5end | |description=CAGE_peak_10_at_Lmo2_5end | ||
|id=chr2:103810335..103810349,+ | |id=chr2:103810335..103810349,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.88e-14,19;CL:0000557,5.23e-13,7;CL:0002320,6.39e-11,46;CL:0000134,6.39e-11,46;CL:0002092,4.02e-09,3;CL:0002540,4.02e-09,3;CL:0000988,4.20e-09,32;CL:0002032,4.20e-09,32;CL:0000037,4.20e-09,32;CL:0000837,4.20e-09,32;CL:0000763,4.51e-09,16;CL:0000219,9.25e-09,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!8.19e-07!14;UBERON:0000117!8.19e-07!14;UBERON:0000171!8.19e-07!14;UBERON:0000170!8.19e-07!14;UBERON:0005597!8.19e-07!14;UBERON:0000118!8.19e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.80e-18,16;UBERON:0001474,2.34e-12,22;UBERON:0004765,2.34e-12,22;UBERON:0001434,2.34e-12,22;UBERON:0002048,8.75e-12,14;UBERON:0000117,8.75e-12,14;UBERON:0000171,8.75e-12,14;UBERON:0000170,8.75e-12,14;UBERON:0005597,8.75e-12,14;UBERON:0000118,8.75e-12,14;UBERON:0002384,6.39e-11,46;UBERON:0005153,1.96e-09,17;UBERON:0005178,1.96e-09,17;UBERON:0005181,1.96e-09,17;UBERON:0002224,1.96e-09,17;UBERON:0000915,1.96e-09,17;UBERON:0008947,1.96e-09,17;UBERON:0003258,1.96e-09,17;UBERON:0000310,3.01e-09,6;UBERON:0001443,3.01e-09,6;UBERON:0005157,8.61e-08,20;UBERON:0002204,9.09e-08,32 | |||
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| ||
|short_description=p10@Lmo2 | |short_description=p10@Lmo2 | ||
}} | }} |
Latest revision as of 21:55, 1 October 2015
Short description: | p10@Lmo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Lmo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:512 |
Association with transcript: | -30bp_to_ENSMUST00000111140_5end |
EntrezGene: | Lmo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.88e-14 | 19 |
granulocyte monocyte progenitor cell | 5.23e-13 | 7 |
connective tissue cell | 6.39e-11 | 46 |
mesenchymal cell | 6.39e-11 | 46 |
bone marrow cell | 4.02e-09 | 3 |
mesenchymal stem cell of the bone marrow | 4.02e-09 | 3 |
hematopoietic cell | 4.20e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.20e-09 | 32 |
hematopoietic stem cell | 4.20e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.20e-09 | 32 |
myeloid cell | 4.51e-09 | 16 |
motile cell | 9.25e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.80e-18 | 16 |
bone element | 2.34e-12 | 22 |
skeletal element | 2.34e-12 | 22 |
skeletal system | 2.34e-12 | 22 |
lung | 8.75e-12 | 14 |
respiratory tube | 8.75e-12 | 14 |
respiration organ | 8.75e-12 | 14 |
pair of lungs | 8.75e-12 | 14 |
lung primordium | 8.75e-12 | 14 |
lung bud | 8.75e-12 | 14 |
connective tissue | 6.39e-11 | 46 |
epithelial bud | 1.96e-09 | 17 |
thoracic cavity element | 1.96e-09 | 17 |
thoracic segment organ | 1.96e-09 | 17 |
thoracic cavity | 1.96e-09 | 17 |
thoracic segment of trunk | 1.96e-09 | 17 |
respiratory primordium | 1.96e-09 | 17 |
endoderm of foregut | 1.96e-09 | 17 |
breast | 3.01e-09 | 6 |
chest | 3.01e-09 | 6 |
epithelial fold | 8.61e-08 | 20 |
musculoskeletal system | 9.09e-08 | 32 |